CuGenDBv2

Gene ID	Pay0019347
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ycf20-like protein isoform X1
Genome location	chr09:4098612..4099419
RNA-Seq Expression	Pay0019347
Synteny	Pay0019347
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR007572 - Uncharacterised protein family Ycf20

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6579671.1 hypothetical protein SDJN03_24119, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-47

69.18

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Query:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS
        MAQ A+LV T LLNY FTP+ N SYWRYDM+KSRPS  RS  +KAVQDTGGPRRLV   + + + PE+    +R PSRR LFGGISLLG +YVAQTISLS
Subjt:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS

Query:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS
        F ALGVNDV AAVVCVLL EY          VTFP+A+LNNFKMGFTYGLF+DAFKLAS
Subjt:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS

XP_004143642.1 uncharacterized protein ycf20 [Cucumis sativus]

2.2e-54

76.1

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Query:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS
        MAQ A+LVHTSLLNYGFTPKMNPSYWRYDMVKSRPS  RSFRVKAVQDTGGPRRLV   + + + PE+    +R PSRR LFGGISLLG +YVAQTISLS
Subjt:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS

Query:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS
        F ALGVNDV AAVVCVLL EY          VTFPIA+LNNFKMGFTYGLF+DAFKLAS
Subjt:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS

XP_008467245.1 PREDICTED: uncharacterized protein ycf20 isoform X1 [Cucumis melo]

6.5e-51

72.96

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Query:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS
        MAQ  +LVHT LLNYGF+ KMN SYWRYDMVKSRPS  RSFRVKAVQDTGGPRRLV   + + + PE+    +R PSRR LFGGISLLG +YVAQTISLS
Subjt:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS

Query:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS
        F ALGVNDV AAVVCVLL EY          VTFPIA+LNNFKMGFTYGLF+DAFKLAS
Subjt:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS

XP_023549885.1 uncharacterized protein LOC111808248 [Cucurbita pepo subsp. pepo]

7.4e-47

68.55

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Query:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS
        MAQ A+LV T LLNY FTP+ N SYWRYD++KSRPS  RS  +KAVQDTGGPRRLV   + + + PE+    +R PSRR LFGGISLLG +YVAQTISLS
Subjt:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS

Query:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS
        F ALGVNDV AAVVCVLL EY          VTFP+A+LNNFKMGFTYGLF+DAFKLAS
Subjt:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS

XP_038874767.1 uncharacterized protein ycf20 [Benincasa hispida]

5.7e-47

71.07

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Query:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS
        MAQ A+LVHTSLLNYGFTPK    YWRYDM KSRPS  RS R+KAVQDT GPRRLV   + + + PE+    +R PSRR LFGGISLLG +YVAQTISLS
Subjt:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS

Query:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS
        F ALGVNDV AAVVCVLL EY          VTFPIA+LNNFKMGFTYGLF+DAFKLAS
Subjt:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPS1 Uncharacterized protein

1.0e-54

76.1

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Query:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS
        MAQ A+LVHTSLLNYGFTPKMNPSYWRYDMVKSRPS  RSFRVKAVQDTGGPRRLV   + + + PE+    +R PSRR LFGGISLLG +YVAQTISLS
Subjt:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS

Query:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS
        F ALGVNDV AAVVCVLL EY          VTFPIA+LNNFKMGFTYGLF+DAFKLAS
Subjt:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS

A0A1S3CT33 uncharacterized protein ycf20 isoform X1

3.1e-51

72.96

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Query:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS
        MAQ  +LVHT LLNYGF+ KMN SYWRYDMVKSRPS  RSFRVKAVQDTGGPRRLV   + + + PE+    +R PSRR LFGGISLLG +YVAQTISLS
Subjt:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS

Query:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS
        F ALGVNDV AAVVCVLL EY          VTFPIA+LNNFKMGFTYGLF+DAFKLAS
Subjt:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS

A0A5D3BMH1 Ycf20-like protein isoform X1

6.4e-44

74.1

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Query:  MNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLSFVALGVNDVFAAVVCVLLIE
        MNPSYWRYDMVKSRPS  RSFRVKAVQDTGGPRRLV   + + + PE+    +R PSRR LFGGISLLG +YVAQTISLSF ALGVNDV AAVVCVLL E
Subjt:  MNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLSFVALGVNDVFAAVVCVLLIE

Query:  Y----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS
        Y          VTFPIA+LNNFKMGFTYGLF+DAFKLAS
Subjt:  Y----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS

A0A6J1ESY7 uncharacterized protein ycf20

6.1e-47

68.55

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Query:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS
        MAQ A+LV T LLNY FTP+ N SYWRYD++KSRPS  RS  +KAVQDTGGPRRLV   + + + PE+    +R PSRR LFGGISLLG +YVAQTISLS
Subjt:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS

Query:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS
        F ALGVNDV AAVVCVLL EY          VTFP+A+LNNFKMGFTYGLF+DAFKLAS
Subjt:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS

A0A6J1I440 uncharacterized protein ycf20

4.7e-47

68.55

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Query:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS
        MAQ A+LV T LLNY FTP+ N SYWRYD++KSRPS  RS  +KAVQDTGGPRRLV   + + + PE+    +R PSRR LFGGISLLG +YVAQTISLS
Subjt:  MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLS

Query:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS
        F ALGVNDV AAVVCVLL EY          VTFP+A+LNNFKMGFTYGLF+DAFKLAS
Subjt:  FVALGVNDVFAAVVCVLLIEY----------VTFPIAVLNNFKMGFTYGLFVDAFKLAS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G43050.1 Protein of unknown function (DUF565)

6.1e-31

63.87

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Query:  VKAVQDTGG--PRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLSFVALGVNDVFAAVVCVLLIEY----------VTFPIAVLN
        ++A+Q+T G  PRRL+   + +   PE+    ++ PSRRTLFGGISLLG +YVAQTISLSF ALGVNDV AAV+CVLL EY          VTFPIA+LN
Subjt:  VKAVQDTGG--PRRLVIGTNFLNIFPEV----YRYPSRRTLFGGISLLGCYYVAQTISLSFVALGVNDVFAAVVCVLLIEY----------VTFPIAVLN

Query:  NFKMGFTYGLFVDAFKLAS
        NFKMGFTYGLF+DAFKLAS
Subjt:  NFKMGFTYGLFVDAFKLAS

Sequences

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CDS sequence

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ATGGCACAATATGCAAATTTAGTCCATACTAGCCTCTTAAATTATGGCTTTACTCCCAAAATGAATCCTTCGTATTGGAGATATGATATGGTTAAATCACGACCTTCCTC
TCTGCGTAGCTTTCGTGTCAAAGCTGTGCAAGATACTGGAGGTCCTCGTAGGTTAGTGATAGGTACCAATTTCTTGAATATATTCCCAGAAGTTTATCGATATCCTTCGA
GGAGGACCCTTTTTGGAGGAATCTCATTGTTGGGTTGCTATTATGTGGCACAGACTATCTCATTGTCATTTGTAGCTTTAGGAGTAAATGATGTTTTTGCTGCTGTGGTA
TGCGTTCTCCTTATCGAGTATGTAACTTTCCCCATTGCTGTACTGAACAACTTCAAAATGGGATTCACTTATGGTCTTTTCGTTGATGCTTTCAAACTTGCTAGTTAA

mRNA sequence

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Protein sequence

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MAQYANLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSSLRSFRVKAVQDTGGPRRLVIGTNFLNIFPEVYRYPSRRTLFGGISLLGCYYVAQTISLSFVALGVNDVFAAVV
CVLLIEYVTFPIAVLNNFKMGFTYGLFVDAFKLAS

Pay0019347 (gene) of Melon (Payzawat) v1 genome