; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0019404 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019404
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag/pol protein
Genome locationchr01:12161507..12163263
RNA-Seq ExpressionPay0019404
SyntenyPay0019404
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-26381.82Show/hide
Query:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
Subjt:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL                        
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------

Query:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
                                                                       GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
Subjt:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
        GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
Subjt:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM

Query:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
        YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
Subjt:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG

KAA0033121.1 gag/pol protein [Cucumis melo var. makuwa]8.0e-24777.02Show/hide
Query:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMMSYAQLPSSFWGYAVETAVHILNNV SKSVSETPFELWRGRKPSLSHF+I GCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQ+NRV 
Subjt:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------
        VSTNATFLEEDHMR+HKP++KLVL+EA DESTRVVDEVGPSSRV+ETTTSGQSHPSQSLRMPRRSGR+VSQPNRYL                        
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------

Query:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
                                                                       GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
Subjt:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        W+MDV TAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKINKGKV FLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
        GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLM
Subjt:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM

Query:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
        Y + CTR +ICYAV IVSRYQSN GLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQT+KDSRKSTS SVFTLNG
Subjt:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG

KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-25880.27Show/hide
Query:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVF
Subjt:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL                        
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------

Query:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
                                                                       GYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEI
Subjt:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
        GYLTDVKAWLAAQFQMKDLGE QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
Subjt:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM

Query:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
        YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNG
Subjt:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-26381.82Show/hide
Query:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
Subjt:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL                        
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------

Query:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
                                                                       GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
Subjt:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
        GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
Subjt:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM

Query:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
        YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
Subjt:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG

KAA0062886.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-23982.86Show/hide
Query:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MV SMMSYAQL SSFWGYAVE AVHILNNV SKSVSETPFELWRGRKPSLSHFRIWGCPA+VLVTNPKKLE RSRLCQFVGYPKETRGGLFFDPQENRV 
Subjt:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------
        VSTNATFLEEDHM +HKPR+KLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL                        
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------

Query:  -----------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEEICKLNRSIYGLKQASRSWNIRFDT
                               GYTQREGVDYE+TFSPVAMLKSIRILL IA FYDYEIWQMDVK AFLNGNLEE      SI+       S    FDT
Subjt:  -----------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEEICKLNRSIYGLKQASRSWNIRFDT

Query:  AIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQN
        AIKSYGFDQNVDE CVYKKINKGKVAFLVLYVDDILLIGNDV YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRY MQN
Subjt:  AIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQN

Query:  SKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTG
        SKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY VGIVSRYQSNPGLDHWT +KI+LKYLRRTRDYML+YGAKDLILTG
Subjt:  SKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTG

Query:  YTDSDFQTDKDSRKSTSGSVFTLNG
        YTDSDFQTDKDSRKSTSGSVFTLNG
Subjt:  YTDSDFQTDKDSRKSTSGSVFTLNG

TrEMBL top hitse value%identityAlignment
A0A5A7T2V9 Gag/pol protein9.8e-25980.27Show/hide
Query:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVF
Subjt:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL                        
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------

Query:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
                                                                       GYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEI
Subjt:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
        GYLTDVKAWLAAQFQMKDLGE QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
Subjt:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM

Query:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
        YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNG
Subjt:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG

A0A5A7TZD0 Gag/pol protein1.0e-26381.82Show/hide
Query:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
Subjt:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL                        
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------

Query:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
                                                                       GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
Subjt:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
        GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
Subjt:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM

Query:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
        YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
Subjt:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG

A0A5A7UYE8 Gag/pol protein1.0e-26381.82Show/hide
Query:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
Subjt:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL                        
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------

Query:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
                                                                       GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
Subjt:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
        GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
Subjt:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM

Query:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
        YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
Subjt:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG

A0A5A7V8W0 Gag/pol protein1.0e-23982.86Show/hide
Query:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MV SMMSYAQL SSFWGYAVE AVHILNNV SKSVSETPFELWRGRKPSLSHFRIWGCPA+VLVTNPKKLE RSRLCQFVGYPKETRGGLFFDPQENRV 
Subjt:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------
        VSTNATFLEEDHM +HKPR+KLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL                        
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------

Query:  -----------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEEICKLNRSIYGLKQASRSWNIRFDT
                               GYTQREGVDYE+TFSPVAMLKSIRILL IA FYDYEIWQMDVK AFLNGNLEE      SI+       S    FDT
Subjt:  -----------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEEICKLNRSIYGLKQASRSWNIRFDT

Query:  AIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQN
        AIKSYGFDQNVDE CVYKKINKGKVAFLVLYVDDILLIGNDV YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRY MQN
Subjt:  AIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQN

Query:  SKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTG
        SKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY VGIVSRYQSNPGLDHWT +KI+LKYLRRTRDYML+YGAKDLILTG
Subjt:  SKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTG

Query:  YTDSDFQTDKDSRKSTSGSVFTLNG
        YTDSDFQTDKDSRKSTSGSVFTLNG
Subjt:  YTDSDFQTDKDSRKSTSGSVFTLNG

A0A5D3CZY3 Gag/pol protein3.9e-24777.02Show/hide
Query:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMMSYAQLPSSFWGYAVETAVHILNNV SKSVSETPFELWRGRKPSLSHF+I GCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQ+NRV 
Subjt:  MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------
        VSTNATFLEEDHMR+HKP++KLVL+EA DESTRVVDEVGPSSRV+ETTTSGQSHPSQSLRMPRRSGR+VSQPNRYL                        
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYL------------------------

Query:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
                                                                       GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI
Subjt:  ---------------------------------------------------------------GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        W+MDV TAFLNGNLEE                  +CKLNRSIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKINKGKV FLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
        GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLM
Subjt:  GYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM

Query:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
        Y + CTR +ICYAV IVSRYQSN GLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQT+KDSRKSTS SVFTLNG
Subjt:  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.3e-5236.76Show/hide
Query:  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE----------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGF
        G+TQ+  +DYEETF+PVA + S R +LS+   Y+ ++ QMDVKTAFLNG L+E                +CKLN++IYGLKQA+R W   F+ A+K   F
Subjt:  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE----------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGF

Query:  DQNVDEPCVY--KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGL
          +  + C+Y   K N  +  +++LYVDD+++   D+  + + K +L  +F+M DL E ++ +GI+I  + +   + LSQ+ Y+ K+L +++M+N     
Subjt:  DQNVDEPCVY--KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGL

Query:  LPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYG---AKDLILTGYT
         P    ++     S       ++    P  S +G LMY MLCTRPD+  AV I+SRY S    + W  +K VL+YL+ T D  L++    A +  + GY 
Subjt:  LPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYG---AKDLILTGYT

Query:  DSDFQTDKDSRKSTSGSVFTL
        DSD+   +  RKST+G +F +
Subjt:  DSDFQTDKDSRKSTSGSVFTL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-947.3e-9434.6Show/hide
Query:  VRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCP--AHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENR
        VRSM+  A+LP SFWG AV+TA +++N  PS  ++ E P  +W  ++ S SH +++GC   AHV      KL+ +S  C F+GY  E  G   +DP + +
Subjt:  VRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCP--AHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENR

Query:  VFVSTNATFLE---------------------------------------EDHMRNHKPRSKLVLSEATDESTRVV-------DEVGPSSRVDETTTSGQ
        V  S +  F E                                       E   +  +P   +   E  DE    V       ++  P  R +      +
Subjt:  VFVSTNATFLE---------------------------------------EDHMRNHKPRSKLVLSEATDESTRVV-------DEVGPSSRVDETTTSGQ

Query:  SHPSQSL------RMPRRSGRVVSQPNR--------------------------------------------------------YLGYTQREGVDYEETF
         +PS         R P     V+S P +                                                          G+ Q++G+D++E F
Subjt:  SHPSQSL------RMPRRSGRVVSQPNR--------------------------------------------------------YLGYTQREGVDYEETF

Query:  SPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-K
        SPV  + SIR +LS+A   D E+ Q+DVKTAFL+G+LEE                  +CKLN+S+YGLKQA R W ++FD+ +KS  + +   +PCVY K
Subjt:  SPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-K

Query:  KINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQ
        + ++     L+LYVDD+L++G D G +  +K  L+  F MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R++M+N+K    P    + LSK+ 
Subjt:  KINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQ

Query:  SPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSG
         P T +E  +M ++PY+SAVGSLMYAM+CTRPDI +AVG+VSR+  NPG +HW AVK +L+YLR T    L +G  D IL GYTD+D   D D+RKS++G
Subjt:  SPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSG

Query:  SVFTLNG
         +FT +G
Subjt:  SVFTLNG

P25600 Putative transposon Ty5-1 protein YCL074W2.8e-2430.85Show/hide
Query:  MDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGY
        MDV TAFLN  ++E                  + +L   +YGLKQA   WN   +  +K  GF ++  E  +Y +       ++ +YVDD+L+       
Subjt:  MDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGY

Query:  LTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYA
           VK  L   + MKDLG+    LG+  I    N  + LS   YI K      +   K    P  +   L +  SP     ++D+   PY S VG L++ 
Subjt:  LTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYA

Query:  MLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG
            RPDI Y V ++SR+   P   H  + + VL+YL  TR   L Y     L LT Y D+      D   ST G V  L G
Subjt:  MLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.5e-4135.42Show/hide
Query:  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSY
        GY QR G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL G L +                  +CKL +++YGLKQA R+W +     + + 
Subjt:  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSY

Query:  GFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGL
        GF  +V +  ++       + ++++YVDDIL+ GND   L +    L+ +F +KD  E  Y LGI+    R    L LSQ  YI  LL R +M  +K   
Subjt:  GFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGL

Query:  LPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDS
         P      LS     K     E      Y   VGSL Y +  TRPDI YAV  +S++   P  +H  A+K +L+YL  T ++ + +     L L  Y+D+
Subjt:  LPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDS

Query:  DFQTDKDSRKSTSGSVFTL
        D+  DKD   ST+G +  L
Subjt:  DFQTDKDSRKSTSGSVFTL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.2e-4335.42Show/hide
Query:  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSY
        GY QR G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL G L +                  +C+L ++IYGLKQA R+W +   T + + 
Subjt:  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE------------------ICKLNRSIYGLKQASRSWNIRFDTAIKSY

Query:  GFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGL
        GF  ++ +  ++       + ++++YVDDIL+ GND   L      L+ +F +K+  +  Y LGI+    R  + L LSQ  Y   LL R +M  +K   
Subjt:  GFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGL

Query:  LPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDS
         P      L+     K P   E      Y   VGSL Y +  TRPD+ YAV  +S+Y   P  DHW A+K VL+YL  T D+ + +     L L  Y+D+
Subjt:  LPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDS

Query:  DFQTDKDSRKSTSGSVFTL
        D+  D D   ST+G +  L
Subjt:  DFQTDKDSRKSTSGSVFTL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.1e-4332.42Show/hide
Query:  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE----------------------ICKLNRSIYGLKQASRSWNIRFDTA
        GYTQ+EG+D+ ETFSPV  L S++++L+I+  Y++ + Q+D+  AFLNG+L+E                      +C L +SIYGLKQASR W ++F   
Subjt:  GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEE----------------------ICKLNRSIYGLKQASRSWNIRFDTA

Query:  IKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNS
        +  +GF Q+  +   + KI       +++YVDDI++  N+   + ++K+ L + F+++DLG  +Y LG++I R      + + Q  Y   LL    +   
Subjt:  IKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNS

Query:  KKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK-DLILTG
        K   +P    V  S         +  D +   Y   +G LMY  + TR DI +AV  +S++   P L H  AV  +L Y++ T    L Y ++ ++ L  
Subjt:  KKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK-DLILTG

Query:  YTDSDFQTDKDSRKSTSGSVFTLNGEL
        ++D+ FQ+ KD+R+ST+G    L   L
Subjt:  YTDSDFQTDKDSRKSTSGSVFTLNGEL

ATMG00240.1 Gag-Pol-related retrotransposon family protein3.2e-0437.5Show/hide
Query:  TRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGA-KDLILTGYTDSDFQTDKDSRKSTSG
        TRPD+ +AV  +S++ S        AV  VL Y++ T    L Y A  DL L  + DSD+ +  D+R+S +G
Subjt:  TRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGA-KDLILTGYTDSDFQTDKDSRKSTSG

ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-0738.67Show/hide
Query:  VRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSR
        VRSM+    LP +F   A  TAVHI+N  PS +++   P E+W    P+ S+ R +GC A++   +  KL+PR++
Subjt:  VRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSR

ATMG00810.1 DNA/RNA polymerases superfamily protein7.4e-1735.23Show/hide
Query:  FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEV
        +L+LYVDDILL G+    L  +   L++ F MKDLG   Y LGIQI        L LSQ  Y +++L    M + K    P    + L+   S     + 
Subjt:  FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEV

Query:  EDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSG
         D R     S VG+L Y  L TRPDI YAV IV +    P L  +  +K VL+Y++ T  + + ++    L +  + DSD+     +R+ST+G
Subjt:  EDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGA
AACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTT
CAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAA
GACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAAC
CACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGGTATACCCAAAGGGAAGGGG
TTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACT
GCTTTTCTGAATGGCAATCTTGAAGAGATTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATC
CTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATG
ATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAG
AACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTT
GTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAG
ACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTAC
ATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAA
TGGGGAGCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGA
AACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTT
CAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAA
GACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAAC
CACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGGTATACCCAAAGGGAAGGGG
TTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACT
GCTTTTCTGAATGGCAATCTTGAAGAGATTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATC
CTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATG
ATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAG
AACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTT
GTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAG
ACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTAC
ATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAA
TGGGGAGCTGTAG
Protein sequenceShow/hide protein sequence
MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE
DHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT
AFLNGNLEEICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRK
NKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY
MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGEL