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Pay0019417 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019417
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionE3 ubiquitin-protein ligase RNF170
Genome locationchr03:18700374..18707951
RNA-Seq ExpressionPay0019417
SyntenyPay0019417
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR038896 - E3 ubiquitin-protein ligase RNF170


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463070.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Cucumis melo]3.1e-7299.24Show/hide
Query:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
        MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
Subjt:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ

Query:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV
        DLPFLLRRLLQELLNPQRSLPLVIRTRVYIA+
Subjt:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV

XP_031743949.1 DNA mismatch repair protein MLH1 isoform X1 [Cucumis sativus]5.9e-7194.12Show/hide
Query:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
        MDGPP GDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPL PCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
Subjt:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ

Query:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAVKSMP
        DLPFLLRRLL+EL NPQRSLPLVIRTRVYIA + +P
Subjt:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAVKSMP

XP_031743956.1 E3 ubiquitin-protein ligase RNF170 isoform X5 [Cucumis sativus]6.5e-7096.21Show/hide
Query:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
        MDGPP GDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPL PCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
Subjt:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ

Query:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV
        DLPFLLRRLL+EL NPQRSLPLVIRTRVYIA+
Subjt:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV

XP_038884720.1 E3 ubiquitin-protein ligase RNF170-like isoform X2 [Benincasa hispida]2.7e-6893.94Show/hide
Query:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
        MDGPP GDICSICHGRFN PCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRR ITLLVPSEVSPIQQSDPEV RVLNNIRTYNRHFGGNST LSQRLQ
Subjt:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ

Query:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV
        DLPFLLRRLL+ELLNPQRSLPLVIRTRVY A+
Subjt:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV

XP_038884722.1 DNA mismatch repair protein MLH1-like isoform X3 [Benincasa hispida]2.5e-6991.91Show/hide
Query:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
        MDGPP GDICSICHGRFN PCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRR ITLLVPSEVSPIQQSDPEV RVLNNIRTYNRHFGGNST LSQRLQ
Subjt:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ

Query:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAVKSMP
        DLPFLLRRLL+ELLNPQRSLPLVIRTRVY A + +P
Subjt:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAVKSMP

TrEMBL top hitse value%identityAlignment
A0A067JVY1 E3 ubiquitin-protein ligase RNF1702.1e-5372.73Show/hide
Query:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
        MDGPPA D CS+CHGRF +PCQANCSHWFCG CIMLVW HGS +QPCKCPLCRR ITLLVPSE S  ++ +PEVA +L  + TYNR FGG +T L QR+Q
Subjt:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ

Query:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV
        DLPFLLRRLL+E+++PQRSLP VIR RVYIA+
Subjt:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV

A0A1S3CIS2 E3 ubiquitin-protein ligase RNF1701.5e-7299.24Show/hide
Query:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
        MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
Subjt:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ

Query:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV
        DLPFLLRRLLQELLNPQRSLPLVIRTRVYIA+
Subjt:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV

A0A6J1DFH0 E3 ubiquitin-protein ligase RNF1703.5e-6184.85Show/hide
Query:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
        MDGPPAGD CSICHG FNIPCQANCSHWFCG CIMLVWDHGS LQPCKCPLCRR ITLLVPSE S  QQS+PEVAR+LNNIRTYN HFG NS  L QR+Q
Subjt:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ

Query:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV
        DLPFLLRRLL+ELL+PQRSLPLVIR RVYIA+
Subjt:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV

A0A6J1EVH0 E3 ubiquitin-protein ligase RNF1708.0e-6690.15Show/hide
Query:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
        MDGPPAGDICSICHGRFN PCQANCSHWFCG+CIMLVWDHGSPLQPCKCPLCRR ITLLVPSE S  QQSDPEVARVLNNIR YNRHFGGNST L+QRLQ
Subjt:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ

Query:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV
        DLPFLLRRLL+ELLNPQRSLPLVIR RVY A+
Subjt:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV

A0A6J1I9X5 E3 ubiquitin-protein ligase RNF1708.9e-6589.39Show/hide
Query:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
        MDGPPAGDICSICHGRFN PCQANCSHWFCG+CIMLVWDHGS LQPCKCPLCRR ITLLVPSE S  QQSDPEVARVLNNIR YNRHFGGNST L+QRLQ
Subjt:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ

Query:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV
        DLPFLLRRLL+ELLNPQRSLPLVIR RVY A+
Subjt:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV

SwissProt top hitse value%identityAlignment
F1MK05 E3 ubiquitin-protein ligase RNF1708.7e-1737.74Show/hide
Query:  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRL
        C IC  + ++P + NC H FCG CI+  W +GS L    CP+CR+++TLL+P  V        +V  +  +I  YNR F G    + +R+ DLP LLR  
Subjt:  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRL

Query:  LQELLN
         +E+ +
Subjt:  LQELLN

Q5PPX5 E3 ubiquitin-protein ligase RNF1701.6e-1535.85Show/hide
Query:  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRL
        C +C  +   P + NC H FCG CI+  W +G+ L    CP+CR+++TLL P   +  Q+   +   +L     YNR F G    L  R+ DLP LLR  
Subjt:  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRL

Query:  LQELLN
         +E+ +
Subjt:  LQELLN

Q7SZN2 E3 ubiquitin-protein ligase RNF1708.7e-1736.72Show/hide
Query:  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVP----SEVSPIQQSDP-EVARVLNNIRTYNRHFGGNSTDLSQRLQDLPF
        C +C  +  +P + NC H FCG CI+  W +G+ L    CP+CR+ +TLL P    SE S +    P E   +L +I  YNR F G    L  RL+D+P 
Subjt:  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVP----SEVSPIQQSDP-EVARVLNNIRTYNRHFGGNSTDLSQRLQDLPF

Query:  LLRRLLQELLNPQRSLPLVIRTRVYIAV
        LLR   +E+ +    L  + R R+ + V
Subjt:  LLRRLLQELLNPQRSLPLVIRTRVYIAV

Q8CBG9 E3 ubiquitin-protein ligase RNF1701.9e-1637.74Show/hide
Query:  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRL
        C IC  + + P + NC H FCG CI+  W +GS L    CP+CR+++TLL+       Q  D  V R+  ++  YNR F G    + +R+ DLP LLR  
Subjt:  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRL

Query:  LQELLN
         +E+ +
Subjt:  LQELLN

Q96K19 E3 ubiquitin-protein ligase RNF1701.9e-1638.68Show/hide
Query:  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRL
        C IC  + + P + NC H FCG CI+  W +GS L    CP+CR+++TLL+       Q  D  V R+  +I  YNR F G    + +R+ DLP LLR  
Subjt:  CSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRL

Query:  LQELLN
         +E+ +
Subjt:  LQELLN

Arabidopsis top hitse value%identityAlignment
AT1G22510.1 RING/U-box protein with domain of unknown function (DUF 1232)2.9e-5267.42Show/hide
Query:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
        M+ PP  ++CSICHG FN PCQ+NCSHWFCG CIMLVW HGS L+PCKCPLCRR I+LLVPSE +   ++D  V+ VL+++ TYNR FGG S+ L QR+Q
Subjt:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ

Query:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV
        DLPFLLRRLL+E+++PQR+LPLVIR RVYIA+
Subjt:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV

AT1G22510.2 RING/U-box protein with domain of unknown function (DUF 1232)5.6e-3566.67Show/hide
Query:  GKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSLPLVIRTRVYI
        G CIMLVW HGS L+PCKCPLCRR I+LLVPSE +   ++D  V+ VL+++ TYNR FGG S+ L QR+QDLPFLLRRLL+E+++PQR+LPLVIR RVYI
Subjt:  GKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLLQELLNPQRSLPLVIRTRVYI

Query:  AV
        A+
Subjt:  AV

AT1G72175.1 RING/U-box protein with domain of unknown function (DUF 1232)3.8e-5268.94Show/hide
Query:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ
        M+ PP  D+CSICH  F  PCQANCSHWFCG CIMLVW HGS LQPCKCPLCRR I+LLVPSE +   ++D  V  VL N+ TYNR FGG S+ L QR+Q
Subjt:  MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQ

Query:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV
        DLPFLLRRLL+E+++PQR+LPLVIR RVYIA+
Subjt:  DLPFLLRRLLQELLNPQRSLPLVIRTRVYIAV

AT4G33940.1 RING/U-box superfamily protein1.1e-2742.98Show/hide
Query:  DGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQD
        + PP  D+C IC G F +PC+ NC HW+CG CI+  W++ +  +PCKCP+C R IT L P E S  ++ + EV  VL+ +R YNR F G  T   Q++ +
Subjt:  DGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQD

Query:  LPFLLRRLLQELLN
        LPFL++R++  +++
Subjt:  LPFLLRRLLQELLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCCCCCCTGCGGGCGATATCTGTTCAATCTGCCATGGAAGATTCAACATCCCTTGTCAAGCAAATTGTTCGCACTGGTTCTGCGGTAAGTGTATAATGCTTGT
CTGGGATCATGGATCACCACTACAGCCATGCAAATGCCCCTTATGTCGTCGTTCAATCACTTTATTAGTTCCTTCGGAGGTTTCACCAATTCAGCAAAGTGACCCAGAGG
TTGCACGCGTTCTTAACAATATTAGGACTTATAATCGTCATTTCGGTGGCAACTCAACTGATTTAAGTCAGCGGCTGCAGGACCTTCCTTTTCTCCTGCGGAGGTTGCTT
CAAGAACTCCTCAATCCACAGAGATCTCTTCCTCTTGTCATTAGAACACGTGTTTACATTGCAGTTAAGTCAATGCCTCAACCCAACTTTCTCAACATCAATTACTGCTT
ATTTAAGTTATTTTAA
mRNA sequenceShow/hide mRNA sequence
CAATAAATTACTTAAAAATAAATCAGCACCGTGAAGGCATCCCAAGAAACGCGCCTCAGCTTTGAACTTCGAAGTCACAATCATTCTCTTTCTACATCAAATTTCGATTA
ACACTTTGGCAATTTGGAAGACTTTGATTCTTAATATGGACGGCCCCCCTGCGGGCGATATCTGTTCAATCTGCCATGGAAGATTCAACATCCCTTGTCAAGCAAATTGT
TCGCACTGGTTCTGCGGTAAGTGTATAATGCTTGTCTGGGATCATGGATCACCACTACAGCCATGCAAATGCCCCTTATGTCGTCGTTCAATCACTTTATTAGTTCCTTC
GGAGGTTTCACCAATTCAGCAAAGTGACCCAGAGGTTGCACGCGTTCTTAACAATATTAGGACTTATAATCGTCATTTCGGTGGCAACTCAACTGATTTAAGTCAGCGGC
TGCAGGACCTTCCTTTTCTCCTGCGGAGGTTGCTTCAAGAACTCCTCAATCCACAGAGATCTCTTCCTCTTGTCATTAGAACACGTGTTTACATTGCAGTTAAGTCAATG
CCTCAACCCAACTTTCTCAACATCAATTACTGCTTATTTAAGTTATTTTAAATTAAAATTAACTTGTAAATATCCTCTGTTTTTATTGTTCTTTTATTTATCAAATGAAA
AAATTGCTTTCCCATAAGAAGTCTGAACAATCAAGAGAGACATTTCTGGTTGATTGAATGTCATTATAACTGCTGTAATTTGTAATTTGTTTACAGATGGTTCTAAGTGT
AGTCTACACTGTGAGTCCCATCGATATCATACCAAAGCATTACTAGGATTATTTGGACTGATGGATGATATCCTTATACTGCTCATCTGCTTCCTTTACATTGCTGCTAT
GTACCGATCAGTACTTTATAATCGTCACGGAGGAACTTGAACTTCTTTGACAGCTTTTCCAAGACCTGTTAGAAAT
Protein sequenceShow/hide protein sequence
MDGPPAGDICSICHGRFNIPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFGGNSTDLSQRLQDLPFLLRRLL
QELLNPQRSLPLVIRTRVYIAVKSMPQPNFLNINYCLFKLF