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Pay0019427 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019427
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionrRNA-processing protein FCF1-like protein
Genome locationchr01:24771035..24780589
RNA-Seq ExpressionPay0019427
SyntenyPay0019427
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsIPR006984 - rRNA-processing protein Fcf1/Utp23
IPR029060 - PIN-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF49363.1 Protein C14orf111, putative [Ricinus communis]3.0e-1759.46Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQHWDIVALVSLSLVKKARISWQWVY
        QHKCYI+ATCDRDLKRRIRK+P VPI+YIT+H+YSI++LPEAT+GGG+L       + SL +++  R +W  +Y
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQHWDIVALVSLSLVKKARISWQWVY
KAA0053874.1 rRNA-processing protein FCF1-like protein [Cucumis melo var. makuwa]9.3e-1990.2Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQH
        QHKCYI+ATCDRDLKRRIRKIP VPI+YITRHQYSI++LPEATIGGGRLQH
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQH
KAG6434294.1 hypothetical protein SASPL_105918 [Salvia splendens]6.0e-1869.7Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQHWDIVALVSLSLVKKA
        QHKCYI+ATCDRDLKRRIRKIP VPI+YIT+HQYSI++LPEATIGGGR+ H+     +  S V+ A
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQHWDIVALVSLSLVKKA
KAG6437741.1 hypothetical protein SASPL_102669 [Salvia splendens]1.3e-1784.31Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQH
        QHKCYI+ATCDRDLKRRIRKIP VPI+YIT+HQYSI++LPEATIGGGR+ H
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQH
TYK25530.1 rRNA-processing protein FCF1-like protein [Cucumis melo var. makuwa]9.3e-1990.2Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQH
        QHKCYI+ATCDRDLKRRIRKIP VPI+YITRHQYSI++LPEATIGGGRLQH
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQH
TrEMBL top hitse value%identityAlignment
A0A2Z7AR83 PINc domain-containing protein5.5e-1780.39Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQH
        QHKCYI+ATCDRDLKRRIRKIP VPI+YIT+H+YSI++LPEATIGGG ++H
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQH
A0A438JM28 rRNA-processing protein FCF1-like3.2e-1784Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQ
        QHKCYI+ATCDRDLKRRIRK+P VPI+YIT+HQYSI++LPEATIGGGRL+
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQ
A0A5A7UFA7 rRNA-processing protein FCF1-like protein4.5e-1990.2Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQH
        QHKCYI+ATCDRDLKRRIRKIP VPI+YITRHQYSI++LPEATIGGGRLQH
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQH
A0A5D3DQI4 rRNA-processing protein FCF1-like protein4.5e-1990.2Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQH
        QHKCYI+ATCDRDLKRRIRKIP VPI+YITRHQYSI++LPEATIGGGRLQH
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQH
B9RH01 Protein C14orf111, putative1.4e-1759.46Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQHWDIVALVSLSLVKKARISWQWVY
        QHKCYI+ATCDRDLKRRIRK+P VPI+YIT+H+YSI++LPEAT+GGG+L       + SL +++  R +W  +Y
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQHWDIVALVSLSLVKKARISWQWVY
SwissProt top hitse value%identityAlignment
Q32PD0 rRNA-processing protein FCF1 homolog1.1e-1170.73Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPE
        QHKCYI+AT DRDLKRRIRKIP VPI+YI+ H+Y+I+++P+
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPE
Q55GM5 rRNA-processing protein FCF1 homolog1.3e-0752.5Show/hide
Query:  HKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPE
        H+ +I+ATCD DL+RRIRKIP VPI+Y+   +Y+++++P+
Subjt:  HKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPE
Q5RFQ0 rRNA-processing protein FCF1 homolog1.1e-1170.73Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPE
        QHKCYI+AT DRDLKRRIRKIP VPI+YI+ H+Y+I+++P+
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPE
Q9CTH6 rRNA-processing protein FCF1 homolog1.9e-1168.29Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPE
        QHKCYI+AT DRDLKRRIRKIP VPI+Y++ H+Y+I+++P+
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPE
Q9Y324 rRNA-processing protein FCF1 homolog1.1e-1170.73Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPE
        QHKCYI+AT DRDLKRRIRKIP VPI+YI+ H+Y+I+++P+
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPE
Arabidopsis top hitse value%identityAlignment
AT1G26530.1 PIN domain-like family protein5.4e-1778.26Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGG
        QHKC+I+ATCDRDLKRRIRKIP VPI+Y+T+ +YSI++LPEATIGG
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGG
AT2G46230.1 PIN domain-like family protein1.2e-1676.09Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGG
        QHKC+I+ATCDRDLKRRIRKIP VPI+Y+T  +YSI++LPEAT+GG
Subjt:  QHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGG
AT2G46230.2 PIN domain-like family protein2.1e-0579.17Show/hide
Query:  QHKCYIIATCDRDLKRRIRKIPSV
        QHKC+I+ATCDRDLKRRIRK+  V
Subjt:  QHKCYIIATCDRDLKRRIRKIPSV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTGTTAAGGTTTCTTTTTGTGCAGCATAAGTGTTATATCATTGCTACTTGTGATAGAGATTTGAAGCGTAGGATTCGCAAGATCCCTAGCGTACCCATC
ATATATATAACTCGACATCAATATTCGATTAAGCAGTTGCCTGAGGCAACAATTGGAGGAGGTAGGCTACAACATTGGGATATTGTGGCCTTGGTATCTCTAAGC
TTAGTGAAGAAAGCTCGAATTTCTTGGCAATGGGTTTATTTAACTAATGGCACTTGGAAAGGGGGAAACCAGATTATGGTTTCTAGAAGAAAAACTCACCATGAA
AGTTCAGATCCATGTAAAGAGGAAGATGAAATCTATGGTTATGACGAAGAGGAAGAGTCAGACGAAAACTATGGATCCGACGAAGAGGAACAATCAAGCAAAAAC
TATAGATCCGACGAAGAGGAACAATATAGCGAAGAGGAAGAGTCCGAGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGTGTTAAGGTTTCTTTTTGTGCAGCATAAGTGTTATATCATTGCTACTTGTGATAGAGATTTGAAGCGTAGGATTCGCAAGATCCCTAGCGTACCCATC
ATATATATAACTCGACATCAATATTCGATTAAGCAGTTGCCTGAGGCAACAATTGGAGGAGGTAGGCTACAACATTGGGATATTGTGGCCTTGGTATCTCTAAGC
TTAGTGAAGAAAGCTCGAATTTCTTGGCAATGGGTTTATTTAACTAATGGCACTTGGAAAGGGGGAAACCAGATTATGGTTTCTAGAAGAAAAACTCACCATGAA
AGTTCAGATCCATGTAAAGAGGAAGATGAAATCTATGGTTATGACGAAGAGGAAGAGTCAGACGAAAACTATGGATCCGACGAAGAGGAACAATCAAGCAAAAAC
TATAGATCCGACGAAGAGGAACAATATAGCGAAGAGGAAGAGTCCGAGTTGTAG
Protein sequenceShow/hide protein sequence
MNVLRFLFVQHKCYIIATCDRDLKRRIRKIPSVPIIYITRHQYSIKQLPEATIGGGRLQHWDIVALVSLSLVKKARISWQWVYLTNGTWKGGNQIMVSRRKTHHE
SSDPCKEEDEIYGYDEEEESDENYGSDEEEQSSKNYRSDEEEQYSEEEESEL