CuGenDBv2

Gene ID	Pay0019643
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Genome location	chr05:26107531..26109387
RNA-Seq Expression	Pay0019643
Synteny	Pay0019643
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0004519 - endonuclease activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR016197 - Chromo-like domain superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.76

Show/hide

Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
        MQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQI T+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK

Query:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS
        VSHSAALITRQAPLHRDLERAEI VSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLS
Subjt:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        EAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
        FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG
         YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG
Subjt:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG

Query:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
        KLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDY+PL+IDE+LSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
Subjt:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA

Query:  TWEREDDMRSRYPDLFEE
        TWEREDDM+SRYP+L  E
Subjt:  TWEREDDMRSRYPDLFEE

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.09

Show/hide

Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
        MQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQI T+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK

Query:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS
        VSHSAALITRQAPLHRDLERAEI VSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKTELL 
Subjt:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
        FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG
        AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRFERRG
Subjt:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG

Query:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
        KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDE+LSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
Subjt:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA

Query:  TWEREDDMRSRYPDLFEE
        TWEREDDMRSRYP+LFEE
Subjt:  TWEREDDMRSRYPDLFEE

KAA0051368.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.41

Show/hide

Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
        MQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQI T+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK

Query:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS
        VSHSAALITRQAPLHRDLERAEI VSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKTELLS
Subjt:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
        FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG
        AYNNSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GVLRFERRG
Subjt:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG

Query:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
        KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDE+LSY EQPVEVLAREVKTLRNK+IPLVKVLWRNHRVEEA
Subjt:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA

Query:  TWEREDDMRSRYPDLFEE
        TWEREDDMRSRYP+LFEE
Subjt:  TWEREDDMRSRYPDLFEE

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.76

Show/hide

Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
        MQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQI T+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK

Query:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS
        VSHSAALITRQAPLHRDLERAEI VSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELL+
Subjt:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAH
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
        FVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEF
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG
        AYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRG
Subjt:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG

Query:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
        KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDY+PLEIDE+LSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHR+EEA
Subjt:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA

Query:  TWEREDDMRSRYPDLFEE
        TWEREDDMRSRYP+LFEE
Subjt:  TWEREDDMRSRYPDLFEE

KAA0066456.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.28

Show/hide

Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
        MQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQI T+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK

Query:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS
        VSHS ALITRQAPLHRDLERAEI VS+GAVT+QLA+L VQPTLRQRIIDAQGNDPYLVEKRGL EAGQ  EFSLSSDGGLLFERRLCVPSDSAVK ELLS
Subjt:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        EAHSSPFSMHPGSTK+YQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
        FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG
        AYNNSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRG
Subjt:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG

Query:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
        KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDE+LSYTE+PV+VLAREVKTLRNKEIPLVKVLWRNHRVEEA
Subjt:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA

Query:  TWEREDDMRSRYPDLFEE
        TWE EDDMRSRYP+LFE+
Subjt:  TWEREDDMRSRYPDLFEE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U330 Reverse transcriptase

0.0e+00

96.76

Show/hide

Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
        MQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQI T+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK

Query:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS
        VSHSAALITRQAPLHRDLERAEI VSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLS
Subjt:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        EAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
        FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG
         YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG
Subjt:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG

Query:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
        KLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDY+PL+IDE+LSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
Subjt:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA

Query:  TWEREDDMRSRYPDLFEE
        TWEREDDM+SRYP+L  E
Subjt:  TWEREDDMRSRYPDLFEE

A0A5A7U7V9 Reverse transcriptase

0.0e+00

97.41

Show/hide

Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
        MQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQI T+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK

Query:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS
        VSHSAALITRQAPLHRDLERAEI VSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKTELLS
Subjt:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
        FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG
        AYNNSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GVLRFERRG
Subjt:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG

Query:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
        KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDE+LSY EQPVEVLAREVKTLRNK+IPLVKVLWRNHRVEEA
Subjt:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA

Query:  TWEREDDMRSRYPDLFEE
        TWEREDDMRSRYP+LFEE
Subjt:  TWEREDDMRSRYPDLFEE

A0A5A7UAA8 Reverse transcriptase

0.0e+00

97.09

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Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
        MQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQI T+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK

Query:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS
        VSHSAALITRQAPLHRDLERAEI VSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKTELL 
Subjt:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
        FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG
        AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRFERRG
Subjt:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG

Query:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
        KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDE+LSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
Subjt:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA

Query:  TWEREDDMRSRYPDLFEE
        TWEREDDMRSRYP+LFEE
Subjt:  TWEREDDMRSRYPDLFEE

A0A5A7UP94 Pol protein

0.0e+00

96.76

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Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
        MQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQI T+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK

Query:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS
        VSHSAALITRQAPLHRDLERAEI VSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELL+
Subjt:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAH
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
        FVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEF
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG
        AYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRG
Subjt:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG

Query:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
        KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDY+PLEIDE+LSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHR+EEA
Subjt:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA

Query:  TWEREDDMRSRYPDLFEE
        TWEREDDMRSRYP+LFEE
Subjt:  TWEREDDMRSRYPDLFEE

A0A5A7VJE2 Reverse transcriptase

0.0e+00

96.28

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Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
        MQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQI T+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK

Query:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS
        VSHS ALITRQAPLHRDLERAEI VS+GAVT+QLA+L VQPTLRQRIIDAQGNDPYLVEKRGL EAGQ  EFSLSSDGGLLFERRLCVPSDSAVK ELLS
Subjt:  VSHSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        EAHSSPFSMHPGSTK+YQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
        FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG
        AYNNSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRG
Subjt:  AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRG

Query:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
        KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDE+LSYTE+PV+VLAREVKTLRNKEIPLVKVLWRNHRVEEA
Subjt:  KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA

Query:  TWEREDDMRSRYPDLFEE
        TWE EDDMRSRYP+LFE+
Subjt:  TWEREDDMRSRYPDLFEE

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.9e-74

31.99

Show/hide

Query:  VAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYG--EKIQILTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS
        V Y S ++   + NY   D E+  ++ +LK WRHYL    E  +ILT+H++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR   
Subjt:  VAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYG--EKIQILTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS

Query:  HSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLS
            ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ 
Subjt:  HSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A 
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
         VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ 
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFER
        +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +
Subjt:  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFER

Query:  RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
          KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT35 Transposon Tf2-2 polyprotein

2.9e-74

31.99

Show/hide

Query:  VAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYG--EKIQILTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS
        V Y S ++   + NY   D E+  ++ +LK WRHYL    E  +ILT+H++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR   
Subjt:  VAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYG--EKIQILTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS

Query:  HSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLS
            ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ 
Subjt:  HSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A 
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
         VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ 
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFER
        +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +
Subjt:  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFER

Query:  RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
          KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT36 Transposon Tf2-3 polyprotein

2.9e-74

31.99

Show/hide

Query:  VAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYG--EKIQILTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS
        V Y S ++   + NY   D E+  ++ +LK WRHYL    E  +ILT+H++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR   
Subjt:  VAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYG--EKIQILTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS

Query:  HSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLS
            ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ 
Subjt:  HSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A 
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
         VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ 
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFER
        +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +
Subjt:  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFER

Query:  RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
          KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT41 Transposon Tf2-12 polyprotein

2.9e-74

31.99

Show/hide

Query:  VAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYG--EKIQILTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS
        V Y S ++   + NY   D E+  ++ +LK WRHYL    E  +ILT+H++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR   
Subjt:  VAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYG--EKIQILTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS

Query:  HSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLS
            ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ 
Subjt:  HSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A 
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
         VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ 
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFER
        +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +
Subjt:  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFER

Query:  RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
          KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

Q9UR07 Transposon Tf2-11 polyprotein

2.9e-74

31.99

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Query:  VAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYG--EKIQILTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS
        V Y S ++   + NY   D E+  ++ +LK WRHYL    E  +ILT+H++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR   
Subjt:  VAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYG--EKIQILTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS

Query:  HSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLS
            ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ 
Subjt:  HSAALITRQAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLS

Query:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
        + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A 
Subjt:  EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH

Query:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF
         VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ 
Subjt:  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF

Query:  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFER
        +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +
Subjt:  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFER

Query:  RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
          KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCAACAGGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAACGGTGGTTTTTGCTTTGAAAAT
ATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTAACGAATCATAAAAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTG
AGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGA
CAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGTAGTGTCAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTAACGGTACAGCCGACTTTGAGGCAAAGGAT
CATTGATGCTCAAGGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGATGGCGGACTTTTGTTTGAGA
GACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTG
AAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATT
ACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACA
GACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCG
ATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGG
TCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATA
ACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCT
GAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTCGAATT
TGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCATTTGAGATTCTGG
AGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCAT
GTAGTAGATTACGAGCCACTAGAGATTGATGAAGACTTGAGCTATACTGAACAACCCGTTGAGGTGCTGGCTAGAGAGGTGAAAACGTTGAGGAATAAAGAAATTCCTTT
GGTTAAAGTCTTATGGCGGAATCACCGGGTGGAAGAGGCTACATGGGAGCGTGAAGATGACATGAGGTCCCGTTATCCCGATCTGTTCGAGGAATAA

mRNA sequence

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Protein sequence

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MQQGKVVAYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQILTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
QAPLHRDLERAEIVVSVGAVTIQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL
KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVS
IVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGP
ELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSH
VVDYEPLEIDEDLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPDLFEE

Pay0019643 (gene) of Melon (Payzawat) v1 genome