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Pay0019703 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019703
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionNucleolar protein 10
Genome locationchr04:13860562..13867911
RNA-Seq ExpressionPay0019703
SyntenyPay0019703
Gene Ontology termsGO:0010197 - polar nucleus fusion (biological process)
GO:0031118 - rRNA pseudouridine synthesis (biological process)
GO:0031120 - snRNA pseudouridine synthesis (biological process)
GO:0015030 - Cajal body (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031429 - box H/ACA snoRNP complex (cellular component)
GO:0090661 - box H/ACA telomerase RNP complex (cellular component)
GO:0034513 - box H/ACA snoRNA binding (molecular function)
GO:0070034 - telomerase RNA binding (molecular function)
InterPro domainsIPR007264 - H/ACA ribonucleoprotein complex, subunit Nop10
IPR036756 - H/ACA ribonucleoprotein complex, subunit Nop10 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4913253.1 hypothetical protein JHK86_053686 [Glycine max]4.8e-2896.92Show/hide
Query:  TMYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        TMYLQFYINDNGDKVYTTKK+SPLGL TQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  TMYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

KAG6606368.1 H/ACA ribonucleoprotein complex subunit 3-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.9e-3095.65Show/hide
Query:  ECLSTMYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        ECL+TMYLQFYINDNGDKVYTTKKESPLGL TQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQ PPPKY
Subjt:  ECLSTMYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

KAG7011275.1 H/ACA ribonucleoprotein complex subunit 3-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-2892.65Show/hide
Query:  VECLSTMYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP
        VECL+TMYL +YINDNGDKVYTTKKESPLGL  QSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP
Subjt:  VECLSTMYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP

XP_008447412.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis melo]2.1e-28100Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

XP_015957125.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis duranensis]4.8e-2898.44Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINDNGDKVYTTKKE+PLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

TrEMBL top hitse value%identityAlignment
A0A1S3BHD2 Nucleolar protein 101.0e-28100Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

A0A2P2IS35 Nucleolar protein 101.0e-28100Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

A0A445FHI3 Nucleolar protein 102.3e-2896.92Show/hide
Query:  TMYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        TMYLQFYINDNGDKVYTTKK+SPLGL TQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  TMYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

A0A6P4CV10 Nucleolar protein 102.3e-2898.44Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQFYINDNGDKVYTTKKE+PLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

K7MYQ3 Nucleolar protein 102.3e-2896.92Show/hide
Query:  TMYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        TMYLQFYINDNGDKVYTTKK+SPLGL TQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Subjt:  TMYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

SwissProt top hitse value%identityAlignment
Q6DRH5 H/ACA ribonucleoprotein complex subunit 32.5e-1970.97Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP
        M+LQFY+N+NG++VYT KK  P G  T SAHPARFSPDDK+SR RV +KKRFGLL TQQP P
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP

Q93XX8 H/ACA ribonucleoprotein complex subunit 3-like protein6.7e-2584.38Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQ YIN+ G+KVYTTKKESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  P +Y
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

Q9CQS2 H/ACA ribonucleoprotein complex subunit 36.1e-1866.13Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP
        M+LQ+Y+N+ GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQQP P
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP

Q9NPE3 H/ACA ribonucleoprotein complex subunit 36.1e-1866.13Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP
        M+LQ+Y+N+ GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQQP P
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPP

Q9V5P6 H/ACA ribonucleoprotein complex subunit 37.9e-1867.19Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYL + IN+NGD+VYT KK +  G  T SAHPARFSP+DKYSRQR+ +KKRFGLL TQ+P P Y
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

Arabidopsis top hitse value%identityAlignment
AT2G20490.1 nucleolar RNA-binding Nop10p family protein4.7e-2684.38Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQ YIN+ G+KVYTTKKESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  P +Y
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY

AT2G20490.2 nucleolar RNA-binding Nop10p family protein4.4e-2482.81Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
        MYLQ YIN+ G+KVYTT KESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  P +Y
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTATTCCCGAGCCTCGTTGGAGTCACCACCAGATCGGATGGAGACGTTTGCGTGGAGTCGTTTTCATTCTTCATTTGAACAGCCGCCCTTGGTCCCTAACTCCCC
TTCGCGCTCCCCGCGATCGTCCTCTGTCACCCTCGCCCTTCGTCTTGCACGACGTCGCACCTCTGTTCATCTCGTGAGTCACTGGCTCCTCACCTTTTTTCTTTTAGTCC
ATACCTGTCACCATACTCTAACTTGTGTTGAGTGTCTATCAACGATGTATCTTCAGTTTTACATAAACGACAATGGTGATAAAGTCTACACCACAAAGAAGGAATCTCCT
CTAGGTTTGGCTACACAATCTGCTCATCCAGCTCGTTTCTCCCCCGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCA
GCCACCTCCAAAGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTATTCCCGAGCCTCGTTGGAGTCACCACCAGATCGGATGGAGACGTTTGCGTGGAGTCGTTTTCATTCTTCATTTGAACAGCCGCCCTTGGTCCCTAACTCCCC
TTCGCGCTCCCCGCGATCGTCCTCTGTCACCCTCGCCCTTCGTCTTGCACGACGTCGCACCTCTGTTCATCTCGTGAGTCACTGGCTCCTCACCTTTTTTCTTTTAGTCC
ATACCTGTCACCATACTCTAACTTGTGTTGAGTGTCTATCAACGATGTATCTTCAGTTTTACATAAACGACAATGGTGATAAAGTCTACACCACAAAGAAGGAATCTCCT
CTAGGTTTGGCTACACAATCTGCTCATCCAGCTCGTTTCTCCCCCGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCA
GCCACCTCCAAAGTACTGAACTCAACGCACTCTCAAATTACAATTCTATGGCAGTTCTCAAGTGTGTTTGTTTCCCAAACCCCCATCAATAGTTAGATCGTGACTTTGTT
AAACTTTGATAGATAGTTTGCCTTTTCTTTCTGTGGCTTGTAATTGAGCTGTAAAGCACAATTCACTGTTGAACCTTTCTTTAAGCTTGTCAATGGCTTTATGTTTATAT
TGAACTTTATTTTACTGAAAGCAAACTTATCTACTTTGAAGATCTGGTTTTAATGCAAGATAATGGGCCTTTTTCATACTTTTTTCCTCCTTTTGTACAAACATTG
Protein sequenceShow/hide protein sequence
MDYSRASLESPPDRMETFAWSRFHSSFEQPPLVPNSPSRSPRSSSVTLALRLARRRTSVHLVSHWLLTFFLLVHTCHHTLTCVECLSTMYLQFYINDNGDKVYTTKKESP
LGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY