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Pay0019783 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019783
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDNA repair protein recA-like protein 1
Genome locationchr10:18977772..18982349
RNA-Seq ExpressionPay0019783
SyntenyPay0019783
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domainsIPR013765 - DNA recombination and repair protein RecA
IPR020587 - DNA recombination and repair protein RecA, monomer-monomer interface
IPR023400 - DNA recombination and repair protein RecA, C-terminal
IPR035969 - Rab-GTPase-TBC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK29028.1 DNA repair protein recA-like protein 1 [Cucumis melo var. makuwa]4.3e-5897.54Show/hide
Query:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRD
        MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRD
Subjt:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRD

Query:  KALQYLKDNPALQDEIEKELCV
        KALQYLKDNPALQDEIEK + V
Subjt:  KALQYLKDNPALQDEIEKELCV

XP_016901610.1 PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like isoform X1 [Cucumis melo]2.0e-76100Show/hide
Query:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRD
        MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRD
Subjt:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRD

Query:  KALQYLKDNPALQDEIEKELCVMIGGSIVFSAAYRCCLLLHDSVYVHD
        KALQYLKDNPALQDEIEKELCVMIGGSIVFSAAYRCCLLLHDSVYVHD
Subjt:  KALQYLKDNPALQDEIEKELCVMIGGSIVFSAAYRCCLLLHDSVYVHD

XP_016901615.1 PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like isoform X2 [Cucumis melo]4.3e-58100Show/hide
Query:  MEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELCVMIGGSIVFSA
        MEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELCVMIGGSIVFSA
Subjt:  MEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELCVMIGGSIVFSA

Query:  AYRCCLLLHDSVYVHD
        AYRCCLLLHDSVYVHD
Subjt:  AYRCCLLLHDSVYVHD

XP_038898980.1 DNA repair protein recA homolog 1, chloroplastic isoform X1 [Benincasa hispida]8.5e-2264.76Show/hide
Query:  ELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYIL----------ALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELCVMI
        +L  AKGDEEI IRVRVRVQKSKVSRPYKQAEFEIIFGE VGKL  IL            G+       RLGQGRD+ALQYLKDNPALQDEIEK +  M+
Subjt:  ELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYIL----------ALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELCVMI

Query:  GGSIV
            V
Subjt:  GGSIV

XP_038898981.1 DNA repair protein recA homolog 1, chloroplastic isoform X2 [Benincasa hispida]8.5e-2264.76Show/hide
Query:  ELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYIL----------ALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELCVMI
        +L  AKGDEEI IRVRVRVQKSKVSRPYKQAEFEIIFGE VGKL  IL            G+       RLGQGRD+ALQYLKDNPALQDEIEK +  M+
Subjt:  ELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYIL----------ALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELCVMI

Query:  GGSIV
            V
Subjt:  GGSIV

TrEMBL top hitse value%identityAlignment
A0A1S3BAR5 DNA repair protein recA homolog 1, chloroplastic isoform X19.1e-2262.96Show/hide
Query:  PMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYIL----------ALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELC
        P+ +L  AKGDEEI IRVRVRVQKSKVSRPYKQAEFEIIFGE V KL  IL            G+       RLGQGRD+ALQYLKD PALQDEIEK L 
Subjt:  PMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYIL----------ALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELC

Query:  VMIGGSIV
         M+    V
Subjt:  VMIGGSIV

A0A1S4E059 DNA repair protein recA homolog 1, chloroplastic-like isoform X19.9e-77100Show/hide
Query:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRD
        MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRD
Subjt:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRD

Query:  KALQYLKDNPALQDEIEKELCVMIGGSIVFSAAYRCCLLLHDSVYVHD
        KALQYLKDNPALQDEIEKELCVMIGGSIVFSAAYRCCLLLHDSVYVHD
Subjt:  KALQYLKDNPALQDEIEKELCVMIGGSIVFSAAYRCCLLLHDSVYVHD

A0A1S4E0W6 DNA repair protein recA homolog 1, chloroplastic-like isoform X22.1e-58100Show/hide
Query:  MEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELCVMIGGSIVFSA
        MEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELCVMIGGSIVFSA
Subjt:  MEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELCVMIGGSIVFSA

Query:  AYRCCLLLHDSVYVHD
        AYRCCLLLHDSVYVHD
Subjt:  AYRCCLLLHDSVYVHD

A0A5A7UCU6 DNA repair protein recA-like protein 19.1e-2262.96Show/hide
Query:  PMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYIL----------ALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELC
        P+ +L  AKGDEEI IRVRVRVQKSKVSRPYKQAEFEIIFGE V KL  IL            G+       RLGQGRD+ALQYLKD PALQDEIEK L 
Subjt:  PMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYIL----------ALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELC

Query:  VMIGGSIV
         M+    V
Subjt:  VMIGGSIV

A0A5D3DZZ5 DNA repair protein recA-like protein 12.1e-5897.54Show/hide
Query:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRD
        MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRD
Subjt:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRD

Query:  KALQYLKDNPALQDEIEKELCV
        KALQYLKDNPALQDEIEK + V
Subjt:  KALQYLKDNPALQDEIEKELCV

SwissProt top hitse value%identityAlignment
A1VUC3 Protein RecA2.0e-1340Show/hide
Query:  LAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLH----W------RLGQGRDKALQYLKDNPALQDEIEKELCVMIGGS
        + KGDE I    RV+V K+KV+ P+K AEF+I++GE + +L  +L LG +N  +     W      ++GQGRD + ++LK+NPAL  EIE ++   +G  
Subjt:  LAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLH----W------RLGQGRDKALQYLKDNPALQDEIEKELCVMIGGS

Query:  IVFSA
        +V +A
Subjt:  IVFSA

C3PGY9 Protein RecA1.1e-1140.82Show/hide
Query:  LAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQL----HW------RLGQGRDKALQYLKDNPALQDEIEKELCVMIG
        L  G + I  R +++V K+KVS P+K AEF+I++GE + +   I+ LG  +  +     W      +LGQG++KA  +LKDNP L DEIEK++ V +G
Subjt:  LAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQL----HW------RLGQGRDKALQYLKDNPALQDEIEKELCVMIG

P48293 Protein RecA6.3e-1236.19Show/hide
Query:  LAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILAL----------GASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELCVMIGGS
        L KG +E  IR +V+V K+KV+ P++ AEF+IIFG+ +  +  ++ L          GA     +  +GQGRD+ + Y+++NPA  +EI+K +   + G 
Subjt:  LAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILAL----------GASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKELCVMIGGS

Query:  IVFSA
         V SA
Subjt:  IVFSA

Q39199 DNA repair protein recA homolog 1, chloroplastic9.7e-2156.44Show/hide
Query:  AKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYIL----------ALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKEL-CVMIGGS
        +KGDE+I +R RVRVQKSKVSRPYKQAEFEI+FGE V KL  +L            G+       RLGQGR+KALQ+L++NPALQDEIEK++  +M+ G 
Subjt:  AKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYIL----------ALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKEL-CVMIGGS

Query:  I
        +
Subjt:  I

Q7NXL9 Protein RecA6.3e-1238.61Show/hide
Query:  LAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLH----W------RLGQGRDKALQYLKDNPALQDEIEKELCVMIGGS
        + KGDE I    RV+V K+KVS P++QA+FEI++GE + +   I+ LG  +  +     W      ++GQG+D   ++LK NPA+ DEIE+++   +G  
Subjt:  LAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLH----W------RLGQGRDKALQYLKDNPALQDEIEKELCVMIGGS

Query:  I
        I
Subjt:  I

Arabidopsis top hitse value%identityAlignment
AT1G79050.1 recA DNA recombination family protein6.9e-2256.44Show/hide
Query:  AKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYIL----------ALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKEL-CVMIGGS
        +KGDE+I +R RVRVQKSKVSRPYKQAEFEI+FGE V KL  +L            G+       RLGQGR+KALQ+L++NPALQDEIEK++  +M+ G 
Subjt:  AKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYIL----------ALGASNFQLHWRLGQGRDKALQYLKDNPALQDEIEKEL-CVMIGGS

Query:  I
        +
Subjt:  I

AT2G19490.1 recA DNA recombination family protein6.9e-0627.17Show/hide
Query:  LAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASN---------FQLHWRLGQGRDKALQYLKDNPALQDEIEKEL
        + KG+E    +V V++ K+K++ P++ A+FE+ FG+ + K+  I+ L   +         + L+ +   G++   ++LK N + Q+E+ K+L
Subjt:  LAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASN---------FQLHWRLGQGRDKALQYLKDNPALQDEIEKEL

AT3G02460.1 Ypt/Rab-GAP domain of gyp1p superfamily protein1.4e-1187.18Show/hide
Query:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLA
        MGF+A LLLLYMSEEDAFWLLV LLKGAVHAPME LY A
Subjt:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLA

AT3G02460.2 Ypt/Rab-GAP domain of gyp1p superfamily protein1.4e-1187.18Show/hide
Query:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLA
        MGF+A LLLLYMSEEDAFWLLV LLKGAVHAPME LY A
Subjt:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLA

AT5G15930.1 plant adhesion molecule 17.2e-1182.05Show/hide
Query:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLA
        MGF+A LLLLYMSEEDAFWLLV LLKGAVH+P+E LY A
Subjt:  MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTTTAGCTGATTTGTTGCTTCTCTATATGAGTGAAGAGGATGCATTCTGGCTGTTGGTCGAATTACTCAAAGGTGCAGTTCATGCTCCAATGGAAGAATTGTA
TCTGGCTAAAGGAGATGAAGAAATTGAGATTCGAGTTCGTGTTAGAGTCCAAAAGAGCAAGGTGTCAAGGCCATACAAGCAAGCTGAGTTTGAAATTATCTTTGGAGAGG
AAGTAGGTAAACTGGTTTATATTCTGGCCCTTGGAGCAAGCAATTTTCAATTGCATTGGAGGTTGGGACAGGGAAGAGACAAAGCTCTGCAGTACTTAAAAGATAATCCC
GCTCTTCAAGATGAAATCGAGAAGGAACTGTGTGTAATGATTGGTGGTTCGATTGTTTTCTCGGCAGCATATCGTTGTTGCTTATTACTTCATGACAGTGTTTATGTACA
TGATTAG
mRNA sequenceShow/hide mRNA sequence
CCGATCAACTCCGGCCGTCGTCTTCCACCCGAGGCGTTCGTCCAGCAGGTTACTTTTCGTAGCCTTCGCGTCTCCGTTAGCCCAGCCGAAGCGTTGCTCTTCGTCCGTTT
CCTTTTCTGTTTCGCATTCCGGCGAGCCACGCCGAGGTGACGTCTTTCTCTGCCCCTGATCTATCGTCATGTGTCCGCCGGCCGCCATCGCTCCTTTGACCAGTTTTCGC
CCGGGTTGTTGTCTCAATTGTTATGCATCTAGATGTCCCCATCTGAACATGGCTGTCGCCATCGATTTGTCTTCTCAAGAACATGGTTGATGCTAAATGAGCGAAGAGAC
GAACAGAAAGATGTGTGGTCAGAGCAGACGAACAAACGGGATTAGTGGTTTACGACATGAGGCTGTGCTAAACAAACGGAGGATGAATGATCGGAGTAGACGTACAGATG
GGTAGAAGAACAGACGGATCTAAACATGATTTGTGGTTTACGACTCGCGAACGAATAGAGAGACAGATCTGGATGGGATCGGGATGAAGCCAATGGAGTGACAGATGGGA
GGTCTGCCGCGCTCGGATGAATAGAGAGAAATGCAGGGTTGACGGCAAGGGACATCTAGGTTAAAGTTTAGCAAAATAATATTTTATTATTATTTCTGAATAGGTTAAAT
ATGCTAAGCGTCTTTCATTTCTAGTACACACCTTTTACATCTGATGGCTTATTGATTTCCATTATTTTATAGCAGCAGGACAAGTTTATGAAGAGGAAGTTTATGAGAAC
TTCCCATTCATTGAAGCCAACTGTTCCAAATGTAAGTTTATTTGATTGGTTTAAATCTTTAGAGAATGGTATGAATAGCATTTTTGGATAACCATATTTCAGGGTGAAAG
TGAGTGTGTTTGACGATTATGTTCCCCAGATACATAGCTGCTATTGAGTGTGTTTCTGTGCTTTTGTATGAGAATGCATACAACGGTAACCTTTCATTTTCGTTAGTCAT
CAGTAGAGTATAGAAACCTATACACATATCTTATTCAACAAAGTTAATATGTGATTAATTTTACGGTTTTCTTTTGGACTTGGTCAAATATCTCTTTACAATGTCTTCAA
GGTATATTCAGTTTTTGATAGGAATGTTGGATATGTTCAGGTCTGAATCTTATTTTTGCATCAATCATATATTTGTTAACAATTGTATTTGGTGGTGAATGGTACGTAAT
ACTTTTAAGCGTGTAGGGGATGGGATTTTTAGCTGATTTGTTGCTTCTCTATATGAGTGAAGAGGATGCATTCTGGCTGTTGGTCGAATTACTCAAAGGTGCAGTTCATG
CTCCAATGGAAGAATTGTATCTGGCTAAAGGAGATGAAGAAATTGAGATTCGAGTTCGTGTTAGAGTCCAAAAGAGCAAGGTGTCAAGGCCATACAAGCAAGCTGAGTTT
GAAATTATCTTTGGAGAGGAAGTAGGTAAACTGGTTTATATTCTGGCCCTTGGAGCAAGCAATTTTCAATTGCATTGGAGGTTGGGACAGGGAAGAGACAAAGCTCTGCA
GTACTTAAAAGATAATCCCGCTCTTCAAGATGAAATCGAGAAGGAACTGTGTGTAATGATTGGTGGTTCGATTGTTTTCTCGGCAGCATATCGTTGTTGCTTATTACTTC
ATGACAGTGTTTATGTACATGATTAGCCCAAGAATGACATATGTTAAACGGTGGGAATATATTTCATATTGCCTTTCTCAGCTGATTTCACAAAAAAGGGAATGAAAAAG
TTATAGATTCAATCAAGAAATATAGACATGTTTTGGAGGACTATGTAATGGAACATTCAAGACGTAGGAATCAAGTGCATTTTGAGAGCTAATGTACTTTATCTAAACTT
GTTTAGTTTGAATAACAATCTTTATTCCAGGAAGTTATTTAATACTTTATTTTGTAATATTGATGAATTATCGAGGGAAGTTATGGTGT
Protein sequenceShow/hide protein sequence
MGFLADLLLLYMSEEDAFWLLVELLKGAVHAPMEELYLAKGDEEIEIRVRVRVQKSKVSRPYKQAEFEIIFGEEVGKLVYILALGASNFQLHWRLGQGRDKALQYLKDNP
ALQDEIEKELCVMIGGSIVFSAAYRCCLLLHDSVYVHD