; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0019982 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0019982
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr05:16675669..16676093
RNA-Seq ExpressionPay0019982
SyntenyPay0019982
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051368.1 pol protein [Cucumis melo var. makuwa]1.3e-64100Show/hide
Query:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
        KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
Subjt:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV

Query:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
KAA0051744.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.0e-6499.25Show/hide
Query:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
        KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ AEFSLSSDGGLLFERRLCV
Subjt:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV

Query:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
KAA0053280.1 pol protein [Cucumis melo var. makuwa]1.7e-6499.25Show/hide
Query:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
        KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLC+
Subjt:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV

Query:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
KAA0062245.1 pol protein [Cucumis melo var. makuwa]5.0e-6499.25Show/hide
Query:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
        KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ AEFSLSSDGGLLFERRLCV
Subjt:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV

Query:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
TYK01613.1 pol protein [Cucumis melo var. makuwa]1.3e-64100Show/hide
Query:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
        KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
Subjt:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV

Query:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
TrEMBL top hitse value%identityAlignment
A0A5A7U7V9 Reverse transcriptase6.3e-65100Show/hide
Query:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
        KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
Subjt:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV

Query:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
A0A5A7U8T5 Reverse transcriptase2.4e-6499.25Show/hide
Query:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
        KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ AEFSLSSDGGLLFERRLCV
Subjt:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV

Query:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
A0A5A7UDJ5 Pol protein8.2e-6599.25Show/hide
Query:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
        KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLC+
Subjt:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV

Query:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
A0A5A7V8L8 Pol protein2.4e-6499.25Show/hide
Query:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
        KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ AEFSLSSDGGLLFERRLCV
Subjt:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV

Query:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
A0A5D3BPI1 Reverse transcriptase6.3e-65100Show/hide
Query:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
        KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV
Subjt:  KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV

Query:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  PSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGCAAATGTGGTAGCCGATGCTCTTAGTAGGAAAGTGTCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGT
GTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTG
GCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTA
TTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGTTTATTGGTGGCGTAACATGA
mRNA sequenceShow/hide mRNA sequence
GCAAGGCAAATGTGGTAGCCGATGCTCTTAGTAGGAAAGTGTCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCA
GTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACG
TGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAAT
TATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGTTTATTGGTGGCGTAACATGA
Protein sequenceShow/hide protein sequence
KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTEL
LSEAHSSPFSMHPGSTKMYQDLKRFIGGVT