| GenBank top hits | e value | %identity | Alignment |
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| TYJ98274.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa] | 2.1e-120 | 100 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFPGRESASTSKNTSTHMAKRW
KKPMFPGRESASTSKNTSTHMAKRW
Subjt: KKPMFPGRESASTSKNTSTHMAKRW
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| XP_004143189.1 transcription elongation factor B polypeptide 3 isoform X1 [Cucumis sativus] | 1.2e-117 | 97.78 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFPGRESASTSKNTSTHMAKRW
KKPMF GRESASTSKNTSTHMAKRW
Subjt: KKPMFPGRESASTSKNTSTHMAKRW
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| XP_008456387.2 PREDICTED: transcription elongation factor B polypeptide 3 isoform X1 [Cucumis melo] | 3.9e-119 | 100 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFPGRESASTSKNTSTHMAKR
KKPMFPGRESASTSKNTSTHMAKR
Subjt: KKPMFPGRESASTSKNTSTHMAKR
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| XP_016901950.1 PREDICTED: transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo] | 3.9e-119 | 100 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFPGRESASTSKNTSTHMAKR
KKPMFPGRESASTSKNTSTHMAKR
Subjt: KKPMFPGRESASTSKNTSTHMAKR
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| XP_038900478.1 transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispida] | 1.2e-115 | 96.44 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKM+DIEKNESKAADRIKQSY KENARKQSRQIQICSKVPPSSNKRSFGGS YGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFPGRESASTSKNTSTHMAKRW
KKPMF GRESASTSKNTST MAKRW
Subjt: KKPMFPGRESASTSKNTSTHMAKRW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C4D6 transcription elongation factor B polypeptide 3 isoform X1 | 1.9e-119 | 100 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFPGRESASTSKNTSTHMAKR
KKPMFPGRESASTSKNTSTHMAKR
Subjt: KKPMFPGRESASTSKNTSTHMAKR
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| A0A1S4E1U0 transcription elongation factor B polypeptide 3 isoform X2 | 1.9e-119 | 100 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFPGRESASTSKNTSTHMAKR
KKPMFPGRESASTSKNTSTHMAKR
Subjt: KKPMFPGRESASTSKNTSTHMAKR
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| A0A5D3BGR1 Transcription elongation factor B polypeptide 3 isoform X2 | 1.0e-120 | 100 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFPGRESASTSKNTSTHMAKRW
KKPMFPGRESASTSKNTSTHMAKRW
Subjt: KKPMFPGRESASTSKNTSTHMAKRW
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| A0A6J1G8W9 transcription elongation factor B polypeptide 3 isoform X1 | 3.1e-106 | 86.67 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MY VRK+PSLVDLCV KAIDN+RFLGDVGETD+HLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T V ERM++K+VAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKM+DIEKNES+AADRIKQSYLKENARKQSRQIQICSKVPP+SNKRSFG +GYG NV NTKNK+LKK+KIEVLQSQEMKNIKAWRRNAVQK+ DIPST
Subjt: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFPGRESASTSKNTSTHMAKRW
KKPMF GR+SASTSK+T+THMA++W
Subjt: KKPMFPGRESASTSKNTSTHMAKRW
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| A0A6J1I1I3 transcription elongation factor B polypeptide 3 isoform X1 | 1.4e-106 | 87.11 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MY VRK+PSLVDLCV KAIDN+RFLGDVGETD+HLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+EST V ERM++K+VAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKM+DIEKNES+AADRIKQSYLKENARKQSRQIQICSKVPP+SNKRSFG +GYG NV NTKNK+LKK+KIEVLQSQEMKNIKAWRRNAVQK+ DIPST
Subjt: YEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFPGRESASTSKNTSTHMAKRW
KKPMF GR+SASTSK+T+THMA++W
Subjt: KKPMFPGRESASTSKNTSTHMAKRW
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G42780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | 3.1e-50 | 46.49 | Show/hide |
Query: RKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LLE+IL HCT++QL H+E +++ DL+P+TDK WK FY++ +G+E +IE + +V F+W LYE
Subjt: RKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
Query: KMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-----
K+ +++ E + R+K+ Y EN RKQSRQ ++CSK PPS KR F G S GYN+ + K+ I+KKAKI++L+SQE+KN+ A +RN +QKS I
Subjt: KMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-----
Query: -------PSTKKPM-FPGRESASTSKNT
PST + + + GR T KNT
Subjt: -------PSTKKPM-FPGRESASTSKNT
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| AT2G42780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). | 9.1e-50 | 49 | Show/hide |
Query: RKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LLE+IL HCT++QL H+E +++ DL+P+TDK WK FY++ +G+E +IE + +V F+W LYE
Subjt: RKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
Query: KMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPSTKK
K+ +++ E + R+K+ Y EN RKQSRQ ++CSK PPS KR F G S GYN+ + K+ I+KKAKI++L+SQE+KN+ A +RN +QKS I + K+
Subjt: KMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPSTKK
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