; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0020084 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020084
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon gag protein
Genome locationchr07:11296275..11297921
RNA-Seq ExpressionPay0020084
SyntenyPay0020084
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031967.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.8e-6534.65Show/hide
Query:  MTRLSNASILEFVEDITLHERRLRKEKK-----------KLVKPLKHSLENNLNNPMGE----EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNL
        MTR SN     + ED+    RR+R+E++           + ++ L+ SL++ L+  +G     E  EKT+RKL E D  QRP+ IVI  T   F L+  L
Subjt:  MTRLSNASILEFVEDITLHERRLRKEKK-----------KLVKPLKHSLENNLNNPMGE----EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNL

Query:  ISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDE
        I  L  F+G++GEDPHKHL+DF   CD  RPHG+++               AK+WL  LEP +ITTW  LKK+FLEK FP +R   I KE Y  RQ+  E
Subjt:  ISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDE

Query:  TLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAFRMAKNFKNFSSKTLDANYSSFCD-NYVREQINLMTEL
        +L ++WE++ ELCA  P++ +    ++Q+FY GLL S ++ +  A+G AL +K P+E R L  RMAKN + F ++  +   S   + + ++ Q+  MT L
Subjt:  TLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAFRMAKNFKNFSSKTLDANYSSFCD-NYVREQINLMTEL

Query:  LTSFVKREVPKVVSCGVCGMLGHHNDN-----------------SNIYNSRWMDDP---------------------STYLEDIVSKLAFSLNSFKTNFE
        LTSFV+    KV  C VCG++GH ND                  SN YN+ W D+P                     ST L+DI+  LA +  SF+   +
Subjt:  LTSFVKREVPKVVSCGVCGMLGHHNDN-----------------SNIYNSRWMDDP---------------------STYLEDIVSKLAFSLNSFKTNFE

Query:  QNIPKLSEYTISSSRVMKSDMETMKASVSELGNKLDQLAIHVLKMEEKGKLLAHPNQLINDSNIKEEKKVYANPSFSNASSSNNDSKNIVDY-PLLSFLS
        Q + +L+          K   +   A+VS +  +  ++       E+K   +  P   +N  N  +E+KV  NPS SN  +  +   +   Y P   F S
Subjt:  QNIPKLSEYTISSSRVMKSDMETMKASVSELGNKLDQLAIHVLKMEEKGKLLAHPNQLINDSNIKEEKKVYANPSFSNASSSNNDSKNIVDY-PLLSFLS

Query:  RLSKPRKE
        RL+  +KE
Subjt:  RLSKPRKE

KAA0058150.1 uncharacterized protein E6C27_scaffold274G004630 [Cucumis melo var. makuwa]1.6e-6039.61Show/hide
Query:  EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNLISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQT
        E  EK LR+L EP+   RP+ IVIPPT   F L+  LI  L  F+GS+GEDPHKHL+DF   CD  RP+ +++               AK WL  LEP +
Subjt:  EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNLISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQT

Query:  ITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAF
        ITTW  LKK+FLEK FP +RA  I KE Y  RQ+  E+L ++WER+ ELCA LP+  +    ++Q+FYSGLL   ++ +  A+G AL DKTP+E R+L  
Subjt:  ITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAF

Query:  RMAKNFKNFSSKTLDANYSSFCD-NYVREQINLMTELLTSFVKREVPKVVSCGVCGMLGHHNDN-----SNIYNSRWMDDPSTYLEDIVSKLAFSLNSFK
        RM +N ++F ++  + + S   + + ++ Q+  MT LLTSFV+    KV  CGVCG++GH ND       ++   R  D   T LEDI+  LA +  SF+
Subjt:  RMAKNFKNFSSKTLDANYSSFCD-NYVREQINLMTELLTSFVKREVPKVVSCGVCGMLGHHNDN-----SNIYNSRWMDDPSTYLEDIVSKLAFSLNSFK

Query:  TNFEQNIPKLSEYTISSSRVMKSDME-TMKASVSELGNKLDQLAIHVLKMEEKGKL
           +Q + +L      ++ + K D +  + A       +L Q   H++   +K  L
Subjt:  TNFEQNIPKLSEYTISSSRVMKSDME-TMKASVSELGNKLDQLAIHVLKMEEKGKL

KAE8647060.1 hypothetical protein Csa_022980 [Cucumis sativus]1.3e-10247.44Show/hide
Query:  MTRLSNASILEFVEDITLHERRLRKEKKKLV----------------KPLKHSLENNLNNPMGEEAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSN
        MTRL NAS LEF EDITLHERRLRKEKKKLV                +PL+ SLENNLN+ MGEEAPEKTLRKLYEPD+ QRPIGIVIPPT  NFHLR  
Subjt:  MTRLSNASILEFVEDITLHERRLRKEKKKLV----------------KPLKHSLENNLNNPMGEEAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSN

Query:  LISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTDAKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWERYNELCA
                                                                                                            
Subjt:  LISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTDAKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWERYNELCA

Query:  KLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAFRMAKNFKNF-SSKTLDANYSSFCDNYVREQINLMTELLTSFVKREVPKVVS
         LPYNQL +RDIVQ+FY GLL SV+D I  ASG ALIDKTPSE +RL  RMAKN +NF +S+TLD N S  CDN V+EQ+NL+T++ TSFVK EVPKVVS
Subjt:  KLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAFRMAKNFKNF-SSKTLDANYSSFCDNYVREQINLMTELLTSFVKREVPKVVS

Query:  CGVCGMLGHHND-------------------NSNIYNSRWMDDPS---------------------TYLEDIVSKLAFSLNSFKTNFEQNIPKLSEYTIS
        CGVCG+LGHHND                    SN YNS W DDPS                     TYLE+IVSKLAFS N+FK++FE+N+ KLSEYT+S
Subjt:  CGVCGMLGHHND-------------------NSNIYNSRWMDDPS---------------------TYLEDIVSKLAFSLNSFKTNFEQNIPKLSEYTIS

Query:  SSRVMKSDMETMKASVSELGNKLDQLAIHVLKMEEKGKLLAHPN------------QLIN-----------------DSNIKEEKKVYANPSFSNASSSN
        S+  +K+D+E MKAS+SELGNKLDQLAI  LK E KGKL A PN            +++N                 DSNIK+E K++ NPS SNASSSN
Subjt:  SSRVMKSDMETMKASVSELGNKLDQLAIHVLKMEEKGKLLAHPN------------QLIN-----------------DSNIKEEKKVYANPSFSNASSSN

Query:  NDSKNIVDYPLLSFLSRLSKPRKELKN
        NDS N +D P   F SRLS+PRKELKN
Subjt:  NDSKNIVDYPLLSFLSRLSKPRKELKN

KAE8652898.1 hypothetical protein Csa_022680 [Cucumis sativus]3.6e-11653.09Show/hide
Query:  MTRLSNASILEFVEDITLHERRLRKEKKKLV----------------KPLKHSLENNLNNPMGEEAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSN
        MTRLSNAS LEF EDITL+E RLRKEKKKL                 +PL+ S ENNLNN MGEEAPEKTLR+LYEPDV QRPIG VIPPT  NFHLRSN
Subjt:  MTRLSNASILEFVEDITLHERRLRKEKKKLV----------------KPLKHSLENNLNNPMGEEAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSN

Query:  LISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHD
        LI NL   RGSNGEDPHKHLRDFSW CDL RPHGVT+               AK+WLINLEPQT TTWEQLKKRFLEK FPITRAQT+LKE Y ARQS++
Subjt:  LISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHD

Query:  ETLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAFRMAKNFKNFSSKTLDANYSSFCDNYVREQINLMTEL
        ETLFE+WERYNELCA+ PYNQL +RDIVQ+FY+GLL SV+D I  ASG ALIDKTP +G                                         
Subjt:  ETLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAFRMAKNFKNFSSKTLDANYSSFCDNYVREQINLMTEL

Query:  LTSFVKREVPKVVSCGVCGMLGHHNDNSNIYNSRWMDDPSTYLEDIVSKLAFSLNSFKTNFEQNIPKLSEYTISSSRVMKSDMETMKASVSELGNKLDQL
                   VVSCGVCG+LGHHND       R  DD         S L + L   K N   N P  S                   S  ELGNKLDQL
Subjt:  LTSFVKREVPKVVSCGVCGMLGHHNDNSNIYNSRWMDDPSTYLEDIVSKLAFSLNSFKTNFEQNIPKLSEYTISSSRVMKSDMETMKASVSELGNKLDQL

Query:  AIHVLKMEEKGKLLAHPN------------QLIN-----------------DSNIKEEKKVYANPSFSNASSSNNDSKNIVDYPLLSFLSRLSKPRKELK
        AI  LKME KGKL A PN            +++N                 DSNIK+E KV+ NP  SNASSSNNDS N +D P   F SRLS+PRK+LK
Subjt:  AIHVLKMEEKGKLLAHPN------------QLIN-----------------DSNIKEEKKVYANPSFSNASSSNNDSKNIVDYPLLSFLSRLSKPRKELK

Query:  N
        N
Subjt:  N

XP_019180076.1 PREDICTED: uncharacterized protein LOC109175288 [Ipomoea nil]2.1e-5531.13Show/hide
Query:  MTRLSNASILEFVEDITLHERRLRKEKKKLVKPLKHSLENNLNNPMGEEAPEK-------TLRKLYEPDVQQRPIGIVIPPTIANFHLRSNLISNLSTFR
        MTR S++  L+++ +I    R+LRKE K+          N+  +P+ EE   K       TLR+L  PD+ Q+P+ I IP    +F L+  LI  L  FR
Subjt:  MTRLSNASILEFVEDITLHERRLRKEKKKLVKPLKHSLENNLNNPMGEEAPEK-------TLRKLYEPDVQQRPIGIVIPPTIANFHLRSNLISNLSTFR

Query:  GSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWER
        G  GEDPHKHL++F   C   +P GVTD               AK WL NL P ++ TW  +KK FLEK FP +RA  I KE Y  RQ   ETL+E+WER
Subjt:  GSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWER

Query:  YNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAFRMAKNFKNFSSKTLDA--NYSSFCDNYVREQINLMTELLTSFVKR
        + ELC+  P++Q+  + ++Q+FY GLL + + ++  ASG +L DKTP++ R+L   MA+N + + ++   +    +    + +  +I+ +T L+      
Subjt:  YNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAFRMAKNFKNFSSKTLDA--NYSSFCDNYVREQINLMTELLTSFVKR

Query:  EVPKVVSCGVCGMLGHHNDN----------------------------SNIYNSRWMDDPSTYLEDIVSKLAFSLNSFK--TNFEQNIPKLSEYTISSSR
        ++    +CG+C  +GH  D                             SN YN  W D P+    +  ++  F   +F+     +Q   + S   +S   
Subjt:  EVPKVVSCGVCGMLGHHNDN----------------------------SNIYNSRWMDDPSTYLEDIVSKLAFSLNSFK--TNFEQNIPKLSEYTISSSR

Query:  VMKS--------DMETMKASVSELGNKLDQLAIHVLKMEEK--GKLLA----HPNQLINDSNI-----------------KEEKKVYANPSFSNASS--S
        ++K+          ET +AS+ +LGN++ QLA  V K+E +  GKL +    +P + +N   +                 KEEK    + S +N  S  S
Subjt:  VMKS--------DMETMKASVSELGNKLDQLAIHVLKMEEK--GKLLA----HPNQLINDSNI-----------------KEEKKVYANPSFSNASS--S

Query:  NNDSKNIVDYPLLSFLSRLSKPRKELKNSL
        +  S    D  L  F SRL+K ++E +N +
Subjt:  NNDSKNIVDYPLLSFLSRLSKPRKELKNSL

TrEMBL top hitse value%identityAlignment
A0A1S3CD34 uncharacterized protein LOC1034995002.9e-5542.71Show/hide
Query:  EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNLISNLSTF-RGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQ
        E  EKTLR+L EPD  QRP+ IV+PPT   F L+  LI  L+ F +GS GEDPHKHL+DF   CD  RPHG+ +               AK+WL  LE  
Subjt:  EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNLISNLSTF-RGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQ

Query:  TITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLA
        +ITTW   KK+FLEK FP +RA  I       RQ+  E+L E+WER+ ELCA  P++ +    ++Q+FYSGLL   +  +  A+G AL++KTP+E R L 
Subjt:  TITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLA

Query:  FRMAKNFKNFSSKTLDANYSSFCD-NYVREQINLMTELLTSFVKREVPKVVSCGVCGMLGHHND-----------------NSNIYNSRWMDDPS
         RMA+N ++F ++  + + S   + + ++ Q+  MT LLTSFV   + KV  CGVCG++GH ND                 + N YNS W D+P+
Subjt:  FRMAKNFKNFSSKTLDANYSSFCD-NYVREQINLMTELLTSFVKREVPKVVSCGVCGMLGHHND-----------------NSNIYNSRWMDDPS

A0A5A7SRF5 Retrotransposon gag protein1.8e-6534.65Show/hide
Query:  MTRLSNASILEFVEDITLHERRLRKEKK-----------KLVKPLKHSLENNLNNPMGE----EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNL
        MTR SN     + ED+    RR+R+E++           + ++ L+ SL++ L+  +G     E  EKT+RKL E D  QRP+ IVI  T   F L+  L
Subjt:  MTRLSNASILEFVEDITLHERRLRKEKK-----------KLVKPLKHSLENNLNNPMGE----EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNL

Query:  ISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDE
        I  L  F+G++GEDPHKHL+DF   CD  RPHG+++               AK+WL  LEP +ITTW  LKK+FLEK FP +R   I KE Y  RQ+  E
Subjt:  ISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDE

Query:  TLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAFRMAKNFKNFSSKTLDANYSSFCD-NYVREQINLMTEL
        +L ++WE++ ELCA  P++ +    ++Q+FY GLL S ++ +  A+G AL +K P+E R L  RMAKN + F ++  +   S   + + ++ Q+  MT L
Subjt:  TLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAFRMAKNFKNFSSKTLDANYSSFCD-NYVREQINLMTEL

Query:  LTSFVKREVPKVVSCGVCGMLGHHNDN-----------------SNIYNSRWMDDP---------------------STYLEDIVSKLAFSLNSFKTNFE
        LTSFV+    KV  C VCG++GH ND                  SN YN+ W D+P                     ST L+DI+  LA +  SF+   +
Subjt:  LTSFVKREVPKVVSCGVCGMLGHHNDN-----------------SNIYNSRWMDDP---------------------STYLEDIVSKLAFSLNSFKTNFE

Query:  QNIPKLSEYTISSSRVMKSDMETMKASVSELGNKLDQLAIHVLKMEEKGKLLAHPNQLINDSNIKEEKKVYANPSFSNASSSNNDSKNIVDY-PLLSFLS
        Q + +L+          K   +   A+VS +  +  ++       E+K   +  P   +N  N  +E+KV  NPS SN  +  +   +   Y P   F S
Subjt:  QNIPKLSEYTISSSRVMKSDMETMKASVSELGNKLDQLAIHVLKMEEKGKLLAHPNQLINDSNIKEEKKVYANPSFSNASSSNNDSKNIVDY-PLLSFLS

Query:  RLSKPRKE
        RL+  +KE
Subjt:  RLSKPRKE

A0A5A7USL5 Retrotrans_gag domain-containing protein7.9e-6139.61Show/hide
Query:  EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNLISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQT
        E  EK LR+L EP+   RP+ IVIPPT   F L+  LI  L  F+GS+GEDPHKHL+DF   CD  RP+ +++               AK WL  LEP +
Subjt:  EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNLISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQT

Query:  ITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAF
        ITTW  LKK+FLEK FP +RA  I KE Y  RQ+  E+L ++WER+ ELCA LP+  +    ++Q+FYSGLL   ++ +  A+G AL DKTP+E R+L  
Subjt:  ITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAF

Query:  RMAKNFKNFSSKTLDANYSSFCD-NYVREQINLMTELLTSFVKREVPKVVSCGVCGMLGHHNDN-----SNIYNSRWMDDPSTYLEDIVSKLAFSLNSFK
        RM +N ++F ++  + + S   + + ++ Q+  MT LLTSFV+    KV  CGVCG++GH ND       ++   R  D   T LEDI+  LA +  SF+
Subjt:  RMAKNFKNFSSKTLDANYSSFCD-NYVREQINLMTELLTSFVKREVPKVVSCGVCGMLGHHNDN-----SNIYNSRWMDDPSTYLEDIVSKLAFSLNSFK

Query:  TNFEQNIPKLSEYTISSSRVMKSDME-TMKASVSELGNKLDQLAIHVLKMEEKGKL
           +Q + +L      ++ + K D +  + A       +L Q   H++   +K  L
Subjt:  TNFEQNIPKLSEYTISSSRVMKSDME-TMKASVSELGNKLDQLAIHVLKMEEKGKL

A0A5D3CZ23 Retrotrans_gag domain-containing protein2.2e-5039.87Show/hide
Query:  EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNLISNLSTF-RGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQ
        E  EKTLR+L EPD  QRP+ IV+PPT   F L+  LI  L+ F +GS GEDPHKHL+DF   CD  RPHG+ +               AK+WL  LE  
Subjt:  EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNLISNLSTF-RGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQ

Query:  TITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLA
        +ITTW   KK+FLEK FP +RA  I       RQ+  E+L E+WER+ ELCA  P++ +    ++Q+FYSGLL   +  +  A+G AL++KTP+E R L 
Subjt:  TITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLA

Query:  FRMAKNFKNFSSKTLDANYSSFCDNYVREQINLMTELLTSFVKREVPKVVSCGVCGMLGHHNDN-----SNIYNSRWMDDPSTYLEDIVSKLAFSLNSFK
         RMA+N ++F                     N  +EL  S  K        CGVCG++GH ND       ++   R  D   T LEDI+  L  +  SF+
Subjt:  FRMAKNFKNFSSKTLDANYSSFCDNYVREQINLMTELLTSFVKREVPKVVSCGVCGMLGHHNDN-----SNIYNSRWMDDPSTYLEDIVSKLAFSLNSFK

Query:  TNFEQNIPKLS
           +Q + +L+
Subjt:  TNFEQNIPKLS

A0A5D3DIP6 Retrotrans_gag domain-containing protein9.4e-5435.18Show/hide
Query:  MTRLSNASILEFVEDITLHERRLRKEKK-----------KLVKPLKHSLENNLNNPMGE----EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNL
        MTR SN     + ED+    RR+R+E++           + ++ L+ SL++ L+  +G     E  EKTLR+L EPD  QRP+ IVIP T   F L+S L
Subjt:  MTRLSNASILEFVEDITLHERRLRKEKK-----------KLVKPLKHSLENNLNNPMGE----EAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNL

Query:  ISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDE
        I  L  F+GS GED HKHL+DF   C   RPH +++               AK+WL  LEP  ITTW  LKK+FLEK FP +RA  I KE Y  RQ+  E
Subjt:  ISNLSTFRGSNGEDPHKHLRDFSWTCDLFRPHGVTD---------------AKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDE

Query:  TLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAFRMAKNFKNFSSKTLDANYSSFCDNYVREQINLMTELL
        +L E+WER  EL A  P++ +    ++Q+FYSGLL S ++ +  A+G AL DKT  E R L  RM +N ++F       N +S  DN + ++++  T L 
Subjt:  TLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRALIDKTPSEGRRLAFRMAKNFKNFSSKTLDANYSSFCDNYVREQINLMTELL

Query:  TSFVKREVPKVVSCGVCGMLGHHNDNSNIYNSRWMDDPSTYLEDIVSKLAFSLNSFKTNFEQNIPKLSEYTISSSRVMKSDMETMKASVSELGNKLDQLA
                 KV  CGVCG++GH ND                +ED+       +  +    +Q I +L+          K   +   A+VS +  +  ++ 
Subjt:  TSFVKREVPKVVSCGVCGMLGHHNDNSNIYNSRWMDDPSTYLEDIVSKLAFSLNSFKTNFEQNIPKLSEYTISSSRVMKSDMETMKASVSELGNKLDQLA

Query:  IHVLKMEEKGKLLAHPNQLINDSNIKEEKKVYANPSFSNASSSNNDSKNIVDY-PLLSFLSRLSKPRKE
        ++    +EK K+ + P  L N  N  +E+KV  NPS SN+ +  +   +   Y P   F SRL+  +KE
Subjt:  IHVLKMEEKGKLLAHPNQLINDSNIKEEKKVYANPSFSNASSSNNDSKNIVDY-PLLSFLSRLSKPRKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGGTTGTCCAATGCATCTATATTAGAATTTGTTGAAGACATAACCTTGCATGAAAGAAGACTAAGGAAAGAAAAGAAAAAGCTAGTTAAACCTTTAAAGCATTC
CTTAGAGAACAATTTGAACAATCCAATGGGAGAAGAGGCACCTGAAAAAACCCTTAGAAAACTATATGAGCCCGATGTCCAACAAAGGCCAATAGGTATAGTGATTCCAC
CTACCATAGCCAACTTTCACCTTAGGTCGAATTTAATCTCAAATTTATCTACCTTTAGAGGATCCAATGGAGAAGACCCACATAAACACCTTAGAGACTTTTCTTGGACA
TGTGATCTCTTTAGACCTCATGGGGTAACCGATGCCAAAAAATGGCTTATAAACCTAGAGCCTCAAACCATAACCACTTGGGAACAACTTAAAAAGAGATTTTTAGAAAA
AATCTTCCCAATTACTAGAGCTCAAACAATTTTAAAAGAAACCTATAGTGCTAGGCAATCTCATGATGAAACATTATTTGAATTTTGGGAGAGGTATAATGAACTTTGTG
CTAAGTTGCCTTATAATCAATTGATCAAGAGGGACATTGTGCAATTTTTTTACTCGGGCTTGTTGCTATCGGTTAAAGACTTAATATATGTTGCTTCGGGAAGGGCCTTG
ATAGATAAAACCCCCTCGGAAGGTAGGAGATTAGCTTTTAGGATGGCCAAAAACTTTAAAAACTTTTCTAGTAAAACACTTGATGCCAATTATTCTTCATTTTGTGATAA
TTATGTTAGAGAGCAAATTAATCTAATGACTGAACTTCTTACTTCTTTTGTGAAAAGGGAAGTGCCTAAGGTGGTATCTTGTGGAGTATGTGGCATGCTAGGCCATCATA
ATGATAATAGTAACATCTACAACTCTAGATGGATGGACGATCCAAGTACATATTTAGAAGACATAGTCTCCAAGTTAGCTTTTAGCTTAAATAGTTTTAAAACTAATTTT
GAACAGAACATACCTAAATTGAGTGAATATACTATTAGTTCATCTAGAGTCATGAAAAGTGATATGGAAACCATGAAAGCATCCGTCTCTGAGTTAGGAAATAAGCTTGA
TCAATTAGCAATACATGTTCTTAAAATGGAAGAGAAAGGAAAACTTCTAGCCCATCCTAACCAGCTAATAAATGATTCAAATATCAAAGAAGAAAAGAAGGTATATGCTA
ACCCCTCTTTTTCTAATGCTTCTTCTTCTAATAATGATTCAAAGAATATTGTTGATTATCCTCTACTTTCTTTTCTTTCTAGGTTATCTAAACCAAGGAAAGAATTGAAG
AACTCCTTGAAGTTTTCAAGAAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAGGTTGTCCAATGCATCTATATTAGAATTTGTTGAAGACATAACCTTGCATGAAAGAAGACTAAGGAAAGAAAAGAAAAAGCTAGTTAAACCTTTAAAGCATTC
CTTAGAGAACAATTTGAACAATCCAATGGGAGAAGAGGCACCTGAAAAAACCCTTAGAAAACTATATGAGCCCGATGTCCAACAAAGGCCAATAGGTATAGTGATTCCAC
CTACCATAGCCAACTTTCACCTTAGGTCGAATTTAATCTCAAATTTATCTACCTTTAGAGGATCCAATGGAGAAGACCCACATAAACACCTTAGAGACTTTTCTTGGACA
TGTGATCTCTTTAGACCTCATGGGGTAACCGATGCCAAAAAATGGCTTATAAACCTAGAGCCTCAAACCATAACCACTTGGGAACAACTTAAAAAGAGATTTTTAGAAAA
AATCTTCCCAATTACTAGAGCTCAAACAATTTTAAAAGAAACCTATAGTGCTAGGCAATCTCATGATGAAACATTATTTGAATTTTGGGAGAGGTATAATGAACTTTGTG
CTAAGTTGCCTTATAATCAATTGATCAAGAGGGACATTGTGCAATTTTTTTACTCGGGCTTGTTGCTATCGGTTAAAGACTTAATATATGTTGCTTCGGGAAGGGCCTTG
ATAGATAAAACCCCCTCGGAAGGTAGGAGATTAGCTTTTAGGATGGCCAAAAACTTTAAAAACTTTTCTAGTAAAACACTTGATGCCAATTATTCTTCATTTTGTGATAA
TTATGTTAGAGAGCAAATTAATCTAATGACTGAACTTCTTACTTCTTTTGTGAAAAGGGAAGTGCCTAAGGTGGTATCTTGTGGAGTATGTGGCATGCTAGGCCATCATA
ATGATAATAGTAACATCTACAACTCTAGATGGATGGACGATCCAAGTACATATTTAGAAGACATAGTCTCCAAGTTAGCTTTTAGCTTAAATAGTTTTAAAACTAATTTT
GAACAGAACATACCTAAATTGAGTGAATATACTATTAGTTCATCTAGAGTCATGAAAAGTGATATGGAAACCATGAAAGCATCCGTCTCTGAGTTAGGAAATAAGCTTGA
TCAATTAGCAATACATGTTCTTAAAATGGAAGAGAAAGGAAAACTTCTAGCCCATCCTAACCAGCTAATAAATGATTCAAATATCAAAGAAGAAAAGAAGGTATATGCTA
ACCCCTCTTTTTCTAATGCTTCTTCTTCTAATAATGATTCAAAGAATATTGTTGATTATCCTCTACTTTCTTTTCTTTCTAGGTTATCTAAACCAAGGAAAGAATTGAAG
AACTCCTTGAAGTTTTCAAGAAGGTAG
Protein sequenceShow/hide protein sequence
MTRLSNASILEFVEDITLHERRLRKEKKKLVKPLKHSLENNLNNPMGEEAPEKTLRKLYEPDVQQRPIGIVIPPTIANFHLRSNLISNLSTFRGSNGEDPHKHLRDFSWT
CDLFRPHGVTDAKKWLINLEPQTITTWEQLKKRFLEKIFPITRAQTILKETYSARQSHDETLFEFWERYNELCAKLPYNQLIKRDIVQFFYSGLLLSVKDLIYVASGRAL
IDKTPSEGRRLAFRMAKNFKNFSSKTLDANYSSFCDNYVREQINLMTELLTSFVKREVPKVVSCGVCGMLGHHNDNSNIYNSRWMDDPSTYLEDIVSKLAFSLNSFKTNF
EQNIPKLSEYTISSSRVMKSDMETMKASVSELGNKLDQLAIHVLKMEEKGKLLAHPNQLINDSNIKEEKKVYANPSFSNASSSNNDSKNIVDYPLLSFLSRLSKPRKELK
NSLKFSRR