| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025917.1 pol protein [Cucumis melo var. makuwa] | 2.1e-115 | 66.28 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
Query: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
DLEFEVGDMVFLKVAPMKGVLRFEKKGKL +HDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
Subjt: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
Query: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
ILARE+KKLRSRDIPLVKVLWQNHGVEEATWEREEDMK QYPELFE+
Subjt: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
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| KAA0031437.1 pol protein [Cucumis melo var. makuwa] | 5.7e-113 | 63.98 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFITGLPKTL+GYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVP R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
Query: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
DLEFEVGDMVFLKVAPMKGVLRF KKGKL +HDVFH+SMLR+YVADPTH+VDFEPLQVSENLSYEEQPVE
Subjt: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
Query: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
+LAREVKKLRSR+IPLVK+LWQNHGVEEATWE+EEDM+AQYPELFED
Subjt: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
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| KAA0032541.1 pol protein [Cucumis melo var. makuwa] | 3.3e-113 | 63.98 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVP R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
Query: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
DLEFEVGDMVFLKVAPMKGVLRF KKGKL +HDVFH+SMLR+YVADPTH+VDFEPLQ+SENLSYEEQPVE
Subjt: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
Query: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
+LAREVKKLRSR+IPLVK+LWQNHGVEEATWE+EEDM+AQYPELFED
Subjt: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
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| KAA0033825.1 pol protein [Cucumis melo var. makuwa] | 5.7e-113 | 63.98 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFITGLPKTL+GYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVP R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
Query: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
DLEFEVGDMVFLKVAPMKGVLRF KKGKL +HDVFH+SMLR+YVADPTH+VDFEPLQVSENLSYEEQPVE
Subjt: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
Query: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
+LAREVKKLRSR+IPLVK+LWQNHGVEEATWE+EEDM+AQYPELFED
Subjt: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
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| KAA0060745.1 pol protein [Cucumis melo var. makuwa] | 3.3e-113 | 64.27 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVP R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
Query: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
DLEFEVGDMVFLKVAPMKGVLRF KKGKL +HDVFH+SMLR+YVADPTH+VDFEPLQ+SENLSYEEQPVE
Subjt: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
Query: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
+LAREVKKLRSR+IPLVKVLWQNHGVEEATWE+EEDM+AQYPELFED
Subjt: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SSL3 Reverse transcriptase | 1.6e-113 | 63.98 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVP R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
Query: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
DLEFEVGDMVFLKVAPMKGVLRF KKGKL +HDVFH+SMLR+YVADPTH+VDFEPLQ+SENLSYEEQPVE
Subjt: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
Query: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
+LAREVKKLRSR+IPLVK+LWQNHGVEEATWE+EEDM+AQYPELFED
Subjt: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
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| A0A5A7TP01 Reverse transcriptase | 1.0e-115 | 66.28 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
Query: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
DLEFEVGDMVFLKVAPMKGVLRFEKKGKL +HDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
Subjt: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
Query: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
ILARE+KKLRSRDIPLVKVLWQNHGVEEATWEREEDMK QYPELFE+
Subjt: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
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| A0A5A7UBS1 Reverse transcriptase | 2.7e-113 | 63.98 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFITGLPKTL+GYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVP R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
Query: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
DLEFEVGDMVFLKVAPMKGVLRF KKGKL +HDVFH+SMLR+YVADPTH+VDFEPLQVSENLSYEEQPVE
Subjt: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
Query: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
+LAREVKKLRSR+IPLVK+LWQNHGVEEATWE+EEDM+AQYPELFED
Subjt: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
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| A0A5A7V4E4 Reverse transcriptase | 1.6e-113 | 64.27 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVP R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
Query: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
DLEFEVGDMVFLKVAPMKGVLRF KKGKL +HDVFH+SMLR+YVADPTH+VDFEPLQ+SENLSYEEQPVE
Subjt: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
Query: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
+LAREVKKLRSR+IPLVKVLWQNHGVEEATWE+EEDM+AQYPELFED
Subjt: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
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| A0A5D3CQB5 Reverse transcriptase | 2.7e-113 | 63.98 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFITGLPKTL+GYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVP R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE----------------------------------------
Query: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
DLEFEVGDMVFLKVAPMKGVLRF KKGKL +HDVFH+SMLR+YVADPTH+VDFEPLQVSENLSYEEQPVE
Subjt: --DLEFEVGDMVFLKVAPMKGVLRFEKKGKL-----------------------------MHDVFHVSMLRRYVADPTHIVDFEPLQVSENLSYEEQPVE
Query: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
+LAREVKKLRSR+IPLVK+LWQNHGVEEATWE+EEDM+AQYPELFED
Subjt: ILAREVKKLRSRDIPLVKVLWQNHGVEEATWEREEDMKAQYPELFED
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 5.1e-08 | 25.68 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFIT LP++ GY ++VVVDR +K A VP + TA + +++ ++ G P R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
NQ +E +LR +W H+ L++ +YNN+ + M PFE ++
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
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| P0CT41 Transposon Tf2-12 polyprotein | 5.1e-08 | 25.68 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFIT LP++ GY ++VVVDR +K A VP + TA + +++ ++ G P R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
NQ +E +LR +W H+ L++ +YNN+ + M PFE ++
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.9e-10 | 27.23 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDF+TGLP T +I VVVDR +K AHF+ + T A++ L I HG P R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEDLEFEVGDMVFLKVAPMKGVLRFEKKGKLMH
Q L +LRA V +W +L +EF YN++ T+G +PFE G +P +D E +++A L + K +L H
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEDLEFEVGDMVFLKVAPMKGVLRFEKKGKLMH
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 5.5e-10 | 26.7 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDF+TGLP T +I VVVDR +K AHF+ + T A++ L I HG P R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEDLEFEVGDMVFLKVAPMKGVLRFEKKGKLMH
Q L +LRA +W +L +EF YN++ T+G +PFE G +P +D E +++A L + K +L H
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEDLEFEVGDMVFLKVAPMKGVLRFEKKGKLMH
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| Q9UR07 Transposon Tf2-11 polyprotein | 5.1e-08 | 25.68 | Show/hide |
Query: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
MDFIT LP++ GY ++VVVDR +K A VP + TA + +++ ++ G P R
Subjt: MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVP------------------------------------------R
Query: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
NQ +E +LR +W H+ L++ +YNN+ + M PFE ++
Subjt: LNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
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