; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0020145 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020145
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionAuxin response factor
Genome locationchr04:23291562..23292883
RNA-Seq ExpressionPay0020145
SyntenyPay0020145
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR044835 - Auxin response factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050656.1 auxin response factor 18 isoform X2 [Cucumis melo var. makuwa]3.8e-1990.74Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + QLEESTNQELNHQI HFDLPPKILCRVVNIRLLAEK++DEVYAQITLYPEAD
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

XP_004139643.1 auxin response factor 18 isoform X1 [Cucumis sativus]3.8e-1990.74Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + QLEESTNQELNHQI HFDLPPKILCRVVNIRLLAEK++DEVYAQITLYPEAD
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

XP_011659155.1 auxin response factor 18 isoform X2 [Cucumis sativus]3.8e-1990.74Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + QLEESTNQELNHQI HFDLPPKILCRVVNIRLLAEK++DEVYAQITLYPEAD
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

XP_016902758.1 PREDICTED: auxin response factor 11-like [Cucumis melo]1.1e-3984.11Show/hide
Query:  PLKQKPL----INFFCFLVLHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEADVCIYFYFLALILLLFLFLLSHPSTHPT
        PL + P+    + +F    + QLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEADVCIYFYFLALILLLFLFLLSHPSTHPT
Subjt:  PLKQKPL----INFFCFLVLHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEADVCIYFYFLALILLLFLFLLSHPSTHPT

Query:  IPFSETS
        IPFSETS
Subjt:  IPFSETS

XP_038898458.1 auxin response factor 18-like [Benincasa hispida]3.8e-1990.74Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + QLEESTNQELNHQI HFDLPPKILCRVVNIRLLAEK++DEVYAQITLYPEAD
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

TrEMBL top hitse value%identityAlignment
A0A0A0K887 Auxin response factor1.8e-1990.74Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + QLEESTNQELNHQI HFDLPPKILCRVVNIRLLAEK++DEVYAQITLYPEAD
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

A0A1S4E3F7 auxin response factor 11-like5.5e-4084.11Show/hide
Query:  PLKQKPL----INFFCFLVLHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEADVCIYFYFLALILLLFLFLLSHPSTHPT
        PL + P+    + +F    + QLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEADVCIYFYFLALILLLFLFLLSHPSTHPT
Subjt:  PLKQKPL----INFFCFLVLHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEADVCIYFYFLALILLLFLFLLSHPSTHPT

Query:  IPFSETS
        IPFSETS
Subjt:  IPFSETS

A0A5A7U902 Auxin response factor1.8e-1990.74Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + QLEESTNQELNHQI HFDLPPKILCRVVNIRLLAEK++DEVYAQITLYPEAD
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

A0A5D3C9C4 Auxin response factor1.8e-1990.74Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + QLEESTNQELNHQI HFDLPPKILCRVVNIRLLAEK++DEVYAQITLYPEAD
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

A0A6J1DZ17 Auxin response factor7.0e-1988.89Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + QLEESTNQELNHQI HFDLPPKILCRVVN RLLAEK++DEVYAQITLYPEAD
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

SwissProt top hitse value%identityAlignment
Q0JCZ4 Auxin response factor 92.8e-1264.81Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + QLE STNQ+L+  +  F+LP KILC VVN+ L AE DSDEVYAQI L PEAD
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

Q2LAJ3 Auxin response factor 2A1.5e-1050.77Show/hide
Query:  KQKPLINFFCFLVLHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPE
        ++  L+ +F    + Q+E STNQ  + Q+  ++LP KILCRVVN+ L AE D+DEVYAQ+TL PE
Subjt:  KQKPLINFFCFLVLHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPE

Q6YVY0 Auxin response factor 71.6e-1255.22Show/hide
Query:  KQKPLINFFCFLVLHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        +Q  L+ +F    + QLE ST+Q+L+  +  F+LP KILC+VVN+ L AE DSDEVYAQI L PEAD
Subjt:  KQKPLINFFCFLVLHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

Q94JM3 Auxin response factor 21.8e-1159.26Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + Q+E STNQ    Q+  +DLP K+LCRV+N+ L AE D+DEVYAQITL PEA+
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

Q9C5W9 Auxin response factor 186.8e-1161.82Show/hide
Query:  LHQLEESTNQELN-HQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + QL  STNQ +N  +I  FDLPPKILCRV+++ L AE ++DEVYAQITL PE D
Subjt:  LHQLEESTNQELN-HQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

Arabidopsis top hitse value%identityAlignment
AT3G61830.1 auxin response factor 184.8e-1261.82Show/hide
Query:  LHQLEESTNQELN-HQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + QL  STNQ +N  +I  FDLPPKILCRV+++ L AE ++DEVYAQITL PE D
Subjt:  LHQLEESTNQELN-HQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

AT5G62000.1 auxin response factor 21.3e-1259.26Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + Q+E STNQ    Q+  +DLP K+LCRV+N+ L AE D+DEVYAQITL PEA+
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

AT5G62000.2 auxin response factor 21.3e-1259.26Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + Q+E STNQ    Q+  +DLP K+LCRV+N+ L AE D+DEVYAQITL PEA+
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

AT5G62000.3 auxin response factor 21.3e-1259.26Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + Q+E STNQ    Q+  +DLP K+LCRV+N+ L AE D+DEVYAQITL PEA+
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD

AT5G62000.4 auxin response factor 21.3e-1259.26Show/hide
Query:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
        + Q+E STNQ    Q+  +DLP K+LCRV+N+ L AE D+DEVYAQITL PEA+
Subjt:  LHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGCTGTGGAAGGCATGTGCAGGACCTCTTGTTGAAGTTCCTATCGATGGAGAAAGGGTTTTTTACTTCCCGCAGAGTCATATGGAACAAGTATTTTGTCATCTC
TTTTTCAATTTCACCCTTGAAACAAAAACCCCTCATAAATTTCTTCTGCTTTTTGGTTCTTCATCAGTTGGAAGAGTCCACAAATCAGGAGCTTAATCACCAAATCTCTC
ATTTTGATCTCCCTCCCAAGATCCTATGTCGTGTTGTTAACATTCGTTTGCTGGCTGAAAAGGATTCGGATGAAGTCTATGCTCAAATCACTTTATACCCAGAGGCTGAT
GTATGCATATATTTTTACTTCTTAGCGTTAATCCTTCTTCTGTTCCTCTTCCTTCTTAGCCATCCATCCACCCATCCTACAATCCCATTTTCTGAAACTTCCTAA
mRNA sequenceShow/hide mRNA sequence
AATTGAGCACATAATAATCACAGACACAGTCTGTTACAGAAAAAAAGCAGAAAAAAGAAACGAGGTTGGGGAAAATAAACTTGTGCAGTTAATTATGATTGCTTGCTTAA
CCGTCCTGTTTTCTTAGCTTTTTCCCTCTCTCTTTCTTTCTTCTGTGCCTCGTCCTTTGATTGATCGGTAGATGGGGTAGCAGTAGCACGACAGTTTACCATTCTTTCAG
ACTGTGAAAAACAGAGCAAGAGAGAGAGAGAGAGAGAAAAGAGAGACCCTTTTTCCCCTGTTCCTATTTTCTCCTCTTCTTCTTTGGCTTCTTTTGTTGTTCTTCAATTT
TTGGCATTTTAGACTGAGACCCATTTTTTCAATTTGTATGACGCTTTACGAAGAGAAACCAGGGGAGTCTCACAAAGGTTTGGAAGGTGAGGATCTGTATGAGGAGCTGT
GGAAGGCATGTGCAGGACCTCTTGTTGAAGTTCCTATCGATGGAGAAAGGGTTTTTTACTTCCCGCAGAGTCATATGGAACAAGTATTTTGTCATCTCTTTTTCAATTTC
ACCCTTGAAACAAAAACCCCTCATAAATTTCTTCTGCTTTTTGGTTCTTCATCAGTTGGAAGAGTCCACAAATCAGGAGCTTAATCACCAAATCTCTCATTTTGATCTCC
CTCCCAAGATCCTATGTCGTGTTGTTAACATTCGTTTGCTGGCTGAAAAGGATTCGGATGAAGTCTATGCTCAAATCACTTTATACCCAGAGGCTGATGTATGCATATAT
TTTTACTTCTTAGCGTTAATCCTTCTTCTGTTCCTCTTCCTTCTTAGCCATCCATCCACCCATCCTACAATCCCATTTTCTGAAACTTCCTAACACCTTACACCCCTCTT
CTCTTCAATATATATATAAACTCAAACCAACCTCCTCCTTTTCCCAAATCAGGATACTCCAAGATTGAAGTGGGTGGGGGCTTCTATTTATTTATTTTTAGGTCACCCCT
GATATATCCCATTCCATTGATATACAACTCATAAACTAGTACATTGAAAGAAGTGTATACACATTCATGAATATATGTTCGGTTGAACAATAAACTCAGAGATAATACAG
CAAGCATAAG
Protein sequenceShow/hide protein sequence
MRSCGRHVQDLLLKFLSMEKGFFTSRRVIWNKYFVISFSISPLKQKPLINFFCFLVLHQLEESTNQELNHQISHFDLPPKILCRVVNIRLLAEKDSDEVYAQITLYPEAD
VCIYFYFLALILLLFLFLLSHPSTHPTIPFSETS