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Pay0020169 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020169
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionactivating signal cointegrator 1 complex subunit 1
Genome locationchr07:16150188..16153059
RNA-Seq ExpressionPay0020169
SyntenyPay0020169
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033771.1 activating signal cointegrator 1 complex subunit 1 [Cucumis melo var. makuwa]3.0e-4093.68Show/hide
Query:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI
        KTI QAWRPVCTHACSSEDLSVKDDRVES+DGSQVQEMDC MHSS+ASAQPVEVVEEINVVTELSVNV GDTNLEGQSVP GEKFSVKLNVSEHI
Subjt:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI

KAA0059318.1 activating signal cointegrator 1 complex subunit 1 [Cucumis melo var. makuwa]2.3e-4093.68Show/hide
Query:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI
        KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSS ASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVP GEKFSVKLNV   +
Subjt:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI

XP_004141755.1 activating signal cointegrator 1 complex subunit 1 isoform X2 [Cucumis sativus]1.2e-3384.21Show/hide
Query:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI
        KTISQAWRPVCTHAC SEDLSV+DDRVESEDGSQVQEMD RMH+S  SAQPVEV EEINVVTELSVN+GGDTNLEGQSV  GEKFSVKL+V   +
Subjt:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI

XP_008462176.1 PREDICTED: activating signal cointegrator 1 complex subunit 1 [Cucumis melo]2.3e-4093.68Show/hide
Query:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI
        KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSS ASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVP GEKFSVKLNV   +
Subjt:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI

XP_031745175.1 activating signal cointegrator 1 complex subunit 1 isoform X3 [Cucumis sativus]5.1e-3281.63Show/hide
Query:  KTISQAWRPVCTHACSSE---DLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI
        KTISQAWRPVCTHAC SE   DLSV+DDRVESEDGSQVQEMD RMH+S  SAQPVEV EEINVVTELSVN+GGDTNLEGQSV  GEKFSVKL+V   +
Subjt:  KTISQAWRPVCTHACSSE---DLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI

TrEMBL top hitse value%identityAlignment
A0A0A0K963 KH domain-containing protein5.8e-3484.21Show/hide
Query:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI
        KTISQAWRPVCTHAC SEDLSV+DDRVESEDGSQVQEMD RMH+S  SAQPVEV EEINVVTELSVN+GGDTNLEGQSV  GEKFSVKL+V   +
Subjt:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI

A0A1S3CGC2 activating signal cointegrator 1 complex subunit 11.1e-4093.68Show/hide
Query:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI
        KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSS ASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVP GEKFSVKLNV   +
Subjt:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI

A0A5A7UI82 Activating signal cointegrator 1 complex subunit 19.7e-2997.22Show/hide
Query:  DLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLN
        DLSVKDDRVESEDGSQVQEMDCRMHSS+ASAQPVEVVEEINVVTELSVNV GDTNLEGQSVPFGEKFSVKLN
Subjt:  DLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLN

A0A5D3C0W5 Activating signal cointegrator 1 complex subunit 11.1e-4093.68Show/hide
Query:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI
        KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSS ASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVP GEKFSVKLNV   +
Subjt:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI

A0A5D3DFJ4 Activating signal cointegrator 1 complex subunit 11.4e-4093.68Show/hide
Query:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI
        KTI QAWRPVCTHACSSEDLSVKDDRVES+DGSQVQEMDC MHSS+ASAQPVEVVEEINVVTELSVNV GDTNLEGQSVP GEKFSVKLNVSEHI
Subjt:  KTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPFGEKFSVKLNVSEHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATGTAGTAGATGGATAAGATTTTCTTTTGTTTTCTCTAAATTGTTTTTGTTTTTTCAAATTAAATTCCATTTGCATGACTGCAAAACAATCAGCCAAGCATGGAG
ACCAGTGTGTACCCACGCTTGTTCTTCTGAGGATTTGTCGGTTAAGGATGATAGAGTTGAGTCAGAGGATGGAAGTCAAGTTCAAGAAATGGACTGCAGAATGCATTCCA
GTGTTGCTAGTGCTCAACCAGTAGAAGTAGTTGAAGAAATTAATGTCGTGACTGAGCTAAGTGTAAATGTTGGTGGAGACACAAACTTGGAGGGTCAATCTGTGCCTTTT
GGTGAGAAGTTTTCAGTGAAACTGAATGTAAGTGAGCATATCCGATTAAATGAACTGTTATCAAATATAGTCAATCGAGACTTCCTGTCAATTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATGTAGTAGATGGATAAGATTTTCTTTTGTTTTCTCTAAATTGTTTTTGTTTTTTCAAATTAAATTCCATTTGCATGACTGCAAAACAATCAGCCAAGCATGGAG
ACCAGTGTGTACCCACGCTTGTTCTTCTGAGGATTTGTCGGTTAAGGATGATAGAGTTGAGTCAGAGGATGGAAGTCAAGTTCAAGAAATGGACTGCAGAATGCATTCCA
GTGTTGCTAGTGCTCAACCAGTAGAAGTAGTTGAAGAAATTAATGTCGTGACTGAGCTAAGTGTAAATGTTGGTGGAGACACAAACTTGGAGGGTCAATCTGTGCCTTTT
GGTGAGAAGTTTTCAGTGAAACTGAATGTAAGTGAGCATATCCGATTAAATGAACTGTTATCAAATATAGTCAATCGAGACTTCCTGTCAATTGATTGA
Protein sequenceShow/hide protein sequence
MVCSRWIRFSFVFSKLFLFFQIKFHLHDCKTISQAWRPVCTHACSSEDLSVKDDRVESEDGSQVQEMDCRMHSSVASAQPVEVVEEINVVTELSVNVGGDTNLEGQSVPF
GEKFSVKLNVSEHIRLNELLSNIVNRDFLSID