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Pay0020184 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020184
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr01:35491935..35492636
RNA-Seq ExpressionPay0020184
SyntenyPay0020184
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU28792.1 hypothetical protein TSUD_357780 [Trifolium subterraneum]5.8e-1736.81Show/hide
Query:  LFICSGVAIVCSLFIALLFFNLAMLGWFNCCCRSPEM-TDVKNIKYEDSNLIKIS----TIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHV
        +++  G+ I+ S+ IA +FF L M GW N     P + T + +   + S  + +     T MYK+ + +++    +EC +CL+  ++ E +RKL +C HV
Subjt:  LFICSGVAIVCSLFIALLFFNLAMLGWFNCCCRSPEM-TDVKNIKYEDSNLIKIS----TIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHV

Query:  FHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVV
        FH SCID WL SHS CPLCR+ +D V   N  L     N H++V
Subjt:  FHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVV

KAA0059407.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa]2.3e-130100Show/hide
Query:  MPQFLCRFMKIDTWRAGAIAKFVNASKRSAVHCFSTAAASLSNCYCSAQHLRAPNLQILHSILLPCTMSVLFICSGVAIVCSLFIALLFFNLAMLGWFNC
        MPQFLCRFMKIDTWRAGAIAKFVNASKRSAVHCFSTAAASLSNCYCSAQHLRAPNLQILHSILLPCTMSVLFICSGVAIVCSLFIALLFFNLAMLGWFNC
Subjt:  MPQFLCRFMKIDTWRAGAIAKFVNASKRSAVHCFSTAAASLSNCYCSAQHLRAPNLQILHSILLPCTMSVLFICSGVAIVCSLFIALLFFNLAMLGWFNC

Query:  CCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTS
        CCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTS
Subjt:  CCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTS

Query:  GVVNSHVVVINNSLQIGLSLHESRRGSPSENMV
        GVVNSHVVVINNSLQIGLSLHESRRGSPSENMV
Subjt:  GVVNSHVVVINNSLQIGLSLHESRRGSPSENMV

KAE8646506.1 hypothetical protein Csa_015876 [Cucumis sativus]9.1e-7177.13Show/hide
Query:  QHLRAPNLQ--ILHSILLPCTMSVLFICSGVAIVCSLFIALLFFNLAM-LGWFNCCCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECAL
        +HLRAPNL     +    P  MSVLFICSG+AI+CSL IALLFFNL M LGWFNCCCRSPEMT+VKNIKYEDSNL+KISTIMYKKENKSEETNI SECAL
Subjt:  QHLRAPNLQ--ILHSILLPCTMSVLFICSGVAIVCSLFIALLFFNLAM-LGWFNCCCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECAL

Query:  CLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQIGLSLHESRRGSPSENMV
        CLSP EDGECIR+LLACNHVFHASCID+WLYSHSNCPLCRT L  VAC NGELTSGV    VV I+NSLQI  S H S+R +  ENMV
Subjt:  CLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQIGLSLHESRRGSPSENMV

KAG7013994.1 E3 ubiquitin-protein ligase ATL6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4864.07Show/hide
Query:  MSVLFICSGVAIVCSLFIALLFFNLAMLGWFNCCCRSPEMTD-VKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVF
        MSV FICSG+AI+CSL I+L FF+L +LGWFNCCC SP  T+ V+NIK E S++++I T+ YKKEN++EETN  SEC LCLSP EDGECIR+L +CNHVF
Subjt:  MSVLFICSGVAIVCSLFIALLFFNLAMLGWFNCCCRSPEMTD-VKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVF

Query:  HASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQIGLSLHESRRGSPSENMV
        HASCIDVWL SHS CPLCRT + HVAC   E     V   VV I NSLQI LS H  R  +  ENMV
Subjt:  HASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQIGLSLHESRRGSPSENMV

PNX96352.1 RING-H2 finger protein ATL52-like [Trifolium pratense]3.8e-1637.24Show/hide
Query:  LFICSGVAIVCSLFIALLFFNLAMLGWFNCCCRSPEMTDVKNIKYEDSNLIKIS------TIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNH
        +++  G+ I+ S+ IA + F L M GW +     P +     I Y++     +S      T MYK+ + +E+    +EC +CLS  ++ E +RKL +C H
Subjt:  LFICSGVAIVCSLFIALLFFNLAMLGWFNCCCRSPEMTDVKNIKYEDSNLIKIS------TIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNH

Query:  VFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVV
        VFH SCID WL SHS CPLCR+ +D V   N  L     N H +V
Subjt:  VFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVV

TrEMBL top hitse value%identityAlignment
A0A0A0KAX6 RING-type E3 ubiquitin transferase9.2e-6982.04Show/hide
Query:  MSVLFICSGVAIVCSLFIALLFFNLAM-LGWFNCCCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVF
        MSVLFICSG+AI+CSL IALLFFNL M LGWFNCCCRSPEMT+VKNIKYEDSNL+KISTIMYKKENKSEETNI SECALCLSP EDGECIR+LLACNHVF
Subjt:  MSVLFICSGVAIVCSLFIALLFFNLAM-LGWFNCCCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVF

Query:  HASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQIGLSLHESRRGSPSENMV
        HASCID+WLYSHSNCPLCRT L  VAC NGELTSGV    VV I+NSLQI  S H S+R +  ENMV
Subjt:  HASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQIGLSLHESRRGSPSENMV

A0A2K3N066 RING-type E3 ubiquitin transferase1.8e-1637.24Show/hide
Query:  LFICSGVAIVCSLFIALLFFNLAMLGWFNCCCRSPEMTDVKNIKYEDSNLIKIS------TIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNH
        +++  G+ I+ S+ IA + F L M GW +     P +     I Y++     +S      T MYK+ + +E+    +EC +CLS  ++ E +RKL +C H
Subjt:  LFICSGVAIVCSLFIALLFFNLAMLGWFNCCCRSPEMTDVKNIKYEDSNLIKIS------TIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNH

Query:  VFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVV
        VFH SCID WL SHS CPLCR+ +D V   N  L     N H +V
Subjt:  VFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVV

A0A2N9J1M7 RING-type E3 ubiquitin transferase1.6e-1739.57Show/hide
Query:  GVAIVCSLFIALLFFNLAM--LGWFNCCCRSP-EMTDVKNIKYEDSNL--IKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASC
        G+ ++ S+ IAL+F+NL M  L  +      P  +  VK   ++ S L  + ++T  YKK  ++ E    +EC +CLS  ED EC+ +L  C H FH  C
Subjt:  GVAIVCSLFIALLFFNLAM--LGWFNCCCRSP-EMTDVKNIKYEDSNL--IKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASC

Query:  IDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVV
        ID+WLYSHS+CPLCRT +D ++  NG   S      V+V
Subjt:  IDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVV

A0A2Z6MV30 RING-type E3 ubiquitin transferase2.8e-1736.81Show/hide
Query:  LFICSGVAIVCSLFIALLFFNLAMLGWFNCCCRSPEM-TDVKNIKYEDSNLIKIS----TIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHV
        +++  G+ I+ S+ IA +FF L M GW N     P + T + +   + S  + +     T MYK+ + +++    +EC +CL+  ++ E +RKL +C HV
Subjt:  LFICSGVAIVCSLFIALLFFNLAMLGWFNCCCRSPEM-TDVKNIKYEDSNLIKIS----TIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHV

Query:  FHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVV
        FH SCID WL SHS CPLCR+ +D V   N  L     N H++V
Subjt:  FHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVV

A0A5D3BXP3 RING-type E3 ubiquitin transferase1.1e-130100Show/hide
Query:  MPQFLCRFMKIDTWRAGAIAKFVNASKRSAVHCFSTAAASLSNCYCSAQHLRAPNLQILHSILLPCTMSVLFICSGVAIVCSLFIALLFFNLAMLGWFNC
        MPQFLCRFMKIDTWRAGAIAKFVNASKRSAVHCFSTAAASLSNCYCSAQHLRAPNLQILHSILLPCTMSVLFICSGVAIVCSLFIALLFFNLAMLGWFNC
Subjt:  MPQFLCRFMKIDTWRAGAIAKFVNASKRSAVHCFSTAAASLSNCYCSAQHLRAPNLQILHSILLPCTMSVLFICSGVAIVCSLFIALLFFNLAMLGWFNC

Query:  CCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTS
        CCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTS
Subjt:  CCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTS

Query:  GVVNSHVVVINNSLQIGLSLHESRRGSPSENMV
        GVVNSHVVVINNSLQIGLSLHESRRGSPSENMV
Subjt:  GVVNSHVVVINNSLQIGLSLHESRRGSPSENMV

SwissProt top hitse value%identityAlignment
Q7XLY8 E3 ubiquitin-protein ligase Os04g05909002.6e-1238.66Show/hide
Query:  RSPEMTDVKNIKYEDSNLI-KISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHV----------
        RS E  +V      D  LI KI+   Y++ +    T   ++C++CL    DGE +R L  C+H FH  CID WL SHSNCPLCR  +  V          
Subjt:  RSPEMTDVKNIKYEDSNLI-KISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHV----------

Query:  ACNNGELTSGVVNSHVVVI
         C  GE  +G  N+H VV+
Subjt:  ACNNGELTSGVVNSHVVVI

Q8L9T5 RING-H2 finger protein ATL27.6e-1237.6Show/hide
Query:  DSNLIKISTIMYKKENKSEETN-IPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHV-------ACNNGELTSGVVNSHVV
        D N+IK   +       S+ET+  P ECA+CLS  E+ E  R L  C H FH  CID+W +SHS CPLCR+ ++ +       A    E+   V +  V+
Subjt:  DSNLIKISTIMYKKENKSEETN-IPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHV-------ACNNGELTSGVVNSHVV

Query:  VINNSLQIGLSLHESRRGSPSENMV
        VI  S   GL+  +   GS S  M+
Subjt:  VINNSLQIGLSLHESRRGSPSENMV

Q8W571 RING-H2 finger protein ATL321.1e-1339.8Show/hide
Query:  YKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGV----VNSHVVVINNSLQIGLSLH
        Y    +S+  +   ECA+CL+  ED E +R L  CNH+FH  CID WLYSH+ CP+CR+ L   +   G+   GV    +  HVVV   ++++  S H
Subjt:  YKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGV----VNSHVVVINNSLQIGLSLH

Q9LUZ9 RING-H2 finger protein ATL639.0e-1343.48Show/hide
Query:  LGWFNCCCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRT
        LG F+    SP  T  ++ K  DS++I    +   +EN+ EE     EC +CL   E G+  RKL  C H FH  CID+WL SHS CPLCR+
Subjt:  LGWFNCCCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRT

Q9SRQ8 RING-H2 finger protein ATL516.9e-1342.16Show/hide
Query:  DSNLIK-ISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQ
        D +LIK I+   Y+K +   E+   S+C++CLS  ++ E +R L  CNH FH  CID WL SHSNCPLCR  +  V  +  E+   + N  +V  NNS+ 
Subjt:  DSNLIK-ISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQ

Query:  IG
         G
Subjt:  IG

Arabidopsis top hitse value%identityAlignment
AT3G03550.1 RING/U-box superfamily protein4.9e-1442.16Show/hide
Query:  DSNLIK-ISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQ
        D +LIK I+   Y+K +   E+   S+C++CLS  ++ E +R L  CNH FH  CID WL SHSNCPLCR  +  V  +  E+   + N  +V  NNS+ 
Subjt:  DSNLIK-ISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQ

Query:  IG
         G
Subjt:  IG

AT3G16720.1 TOXICOS EN LEVADURA 25.4e-1337.6Show/hide
Query:  DSNLIKISTIMYKKENKSEETN-IPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHV-------ACNNGELTSGVVNSHVV
        D N+IK   +       S+ET+  P ECA+CLS  E+ E  R L  C H FH  CID+W +SHS CPLCR+ ++ +       A    E+   V +  V+
Subjt:  DSNLIKISTIMYKKENKSEETN-IPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHV-------ACNNGELTSGVVNSHVV

Query:  VINNSLQIGLSLHESRRGSPSENMV
        VI  S   GL+  +   GS S  M+
Subjt:  VINNSLQIGLSLHESRRGSPSENMV

AT4G40070.1 RING/U-box superfamily protein7.5e-1539.8Show/hide
Query:  YKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGV----VNSHVVVINNSLQIGLSLH
        Y    +S+  +   ECA+CL+  ED E +R L  CNH+FH  CID WLYSH+ CP+CR+ L   +   G+   GV    +  HVVV   ++++  S H
Subjt:  YKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGV----VNSHVVVINNSLQIGLSLH

AT5G17600.1 RING/U-box superfamily protein5.4e-1350.68Show/hide
Query:  SECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNS
        S+C++CLS  E+ E +R L  CNH FH  CID WL SHSNCPLCR  +  V   N    S   N  VVV N S
Subjt:  SECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNS

AT5G58580.1 TOXICOS EN LEVADURA 636.4e-1443.48Show/hide
Query:  LGWFNCCCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRT
        LG F+    SP  T  ++ K  DS++I    +   +EN+ EE     EC +CL   E G+  RKL  C H FH  CID+WL SHS CPLCR+
Subjt:  LGWFNCCCRSPEMTDVKNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAGTTTCTATGTCGTTTTATGAAGATTGATACCTGGAGGGCTGGAGCAATTGCCAAATTTGTAAATGCATCCAAAAGATCTGCTGTTCATTGTTTCAGCACAGC
TGCAGCATCTTTATCCAATTGCTATTGTTCAGCGCAACACTTAAGGGCTCCTAACTTGCAGATATTGCATTCAATTTTGCTTCCTTGCACTATGTCTGTACTCTTCATCT
GCTCCGGCGTTGCCATTGTTTGCTCGCTGTTTATTGCCCTCTTGTTCTTCAACCTTGCGATGCTGGGATGGTTTAATTGCTGTTGCCGTTCGCCTGAGATGACCGACGTT
AAGAATATTAAATATGAAGACTCAAATCTCATCAAGATCTCAACTATCATGTACAAGAAAGAAAACAAGAGCGAAGAAACTAATATTCCAAGTGAGTGTGCTTTGTGCTT
GTCACCTTGTGAAGATGGGGAATGCATCCGGAAACTTCTCGCCTGCAACCATGTCTTTCATGCTTCATGTATCGACGTATGGCTGTATTCACATTCAAACTGCCCGCTCT
GCCGGACAACACTCGACCATGTAGCTTGTAATAATGGGGAGTTGACATCGGGGGTGGTGAATTCTCATGTAGTAGTCATTAATAACAGTCTCCAGATTGGGCTTTCTCTT
CATGAAAGTCGGAGGGGGTCGCCGTCTGAAAACATGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAGTTTCTATGTCGTTTTATGAAGATTGATACCTGGAGGGCTGGAGCAATTGCCAAATTTGTAAATGCATCCAAAAGATCTGCTGTTCATTGTTTCAGCACAGC
TGCAGCATCTTTATCCAATTGCTATTGTTCAGCGCAACACTTAAGGGCTCCTAACTTGCAGATATTGCATTCAATTTTGCTTCCTTGCACTATGTCTGTACTCTTCATCT
GCTCCGGCGTTGCCATTGTTTGCTCGCTGTTTATTGCCCTCTTGTTCTTCAACCTTGCGATGCTGGGATGGTTTAATTGCTGTTGCCGTTCGCCTGAGATGACCGACGTT
AAGAATATTAAATATGAAGACTCAAATCTCATCAAGATCTCAACTATCATGTACAAGAAAGAAAACAAGAGCGAAGAAACTAATATTCCAAGTGAGTGTGCTTTGTGCTT
GTCACCTTGTGAAGATGGGGAATGCATCCGGAAACTTCTCGCCTGCAACCATGTCTTTCATGCTTCATGTATCGACGTATGGCTGTATTCACATTCAAACTGCCCGCTCT
GCCGGACAACACTCGACCATGTAGCTTGTAATAATGGGGAGTTGACATCGGGGGTGGTGAATTCTCATGTAGTAGTCATTAATAACAGTCTCCAGATTGGGCTTTCTCTT
CATGAAAGTCGGAGGGGGTCGCCGTCTGAAAACATGGTTTAA
Protein sequenceShow/hide protein sequence
MPQFLCRFMKIDTWRAGAIAKFVNASKRSAVHCFSTAAASLSNCYCSAQHLRAPNLQILHSILLPCTMSVLFICSGVAIVCSLFIALLFFNLAMLGWFNCCCRSPEMTDV
KNIKYEDSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLYSHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQIGLSL
HESRRGSPSENMV