; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0020239 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020239
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr06:19599898..19601244
RNA-Seq ExpressionPay0020239
SyntenyPay0020239
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34247.1 ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]1.5e-18879.19Show/hide
Query:  MASKKAASNSSIASDAYTGPITRIRSKGII--QEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEM
        MA+ KAAS SS+ASD+Y G +T+   K  +  QEQ+QG  + +  L+QL+ESPK GI+I +NPL++NS  AS+ S K +H +++SVMM D+TA+A + EM
Subjt:  MASKKAASNSSIASDAYTGPITRIRSKGII--QEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEM

Query:  ERNINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRID
        ER INFLMK              QM+  ET ESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQ+GG PQTSF YSK YTKRID
Subjt:  ERNINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRID

Query:  SLRMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRK
        +LRMPLGYQPPKFQQFDG+GN KQHIAHFVETCENAGSRGDQLV+QFVRSLKGNAFEWYTDLEPEVID+WEQLE EFLNRFYSTRR VSMMELTNTKQRK
Subjt:  SLRMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRK

Query:  GEPVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSM
        GEPVI+YINRWRALSLDCKD+LTELSAVEMCTQGMHW LLYILQGIKPRTFEELATRAHDMELSIAN+ AKDFLVQRT  D++EINDTKKIANNVLN+SM
Subjt:  GEPVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSM

Query:  LVQETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF
        LVQETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKV+ F
Subjt:  LVQETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF

TYK23445.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]9.3e-18679.09Show/hide
Query:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER
        MASKK AS SS ASD+Y G +T+   K  +QEQ+QG  + +  L+QL+ESPK  I+I +NPL++NS  AS+ S KE+H +++SVMM D+T +A M EME+
Subjt:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER

Query:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL
         INFLMK              QM+  ETAESS+TPVVKATDKGKNVVQENQPQQQS+SVASLSVQQLQDMI NSIRAQ+GG  QTSF YSK YTKRID+L
Subjt:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL

Query:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE
        RMPLGYQPPKFQQFDGKGN KQHIAHFVE CENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLE EFLN FYSTRR VSMMELTNTKQRKGE
Subjt:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE

Query:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV
        PVI+YINRWRALSLDCKD+LTELSAVEMCTQGMH  LLYILQGIKPRTFEELATRAHDMELSIANR AKDFLVQRT  DK+EINDTKKIANNVLN+SMLV
Subjt:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV

Query:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF
        QETPLKSFSKRKETKHKRNHD DEKRRPTLRERQKKV+ F
Subjt:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]9.3e-18679.32Show/hide
Query:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER
        MASKKAAS SS ASD YTGPITR RSKGIIQ QDQGS +AQSILKQLMESPKAGIVI+ENPLY++ DSASS+S KEAHPD+MSVMMAD+  + AMAEMER
Subjt:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER

Query:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL
         IN LMK              QM+TRETAESSQTPVVK  DKGKNVVQENQPQQQS SVASLSVQQLQDMI NSIRAQ+GG  QTSF YSK YTKRID+L
Subjt:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL

Query:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE
        RMPLGYQPPKFQQFDGKGN KQH+AHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPE I+SWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE
Subjt:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE

Query:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV
        PVI+YINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIA+R  KDFLV    +DK E+   +KI  +   +SM+V
Subjt:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV

Query:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF
          TPLK FSK KE + ++  DG E+RR TL+ERQ+KV+ F
Subjt:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]7.1e-18679.32Show/hide
Query:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER
        MASKKAAS SS ASD YTGPITR RSKGIIQ QDQGS +AQSILKQLMESPKAGIVI+ENPLY++ DSASS+S KEAHPD+MSVMMAD+  + AMAEMER
Subjt:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER

Query:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL
         IN LMK              QM+TRETAESSQTPVVK  DKGKNVVQENQPQQQS SVASLSVQQLQDMI +SIRAQ+GG  QTSF YSK YTKRID+L
Subjt:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL

Query:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE
        RMPLGYQPPKFQQFDGKGN KQH+AHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPE I+SWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE
Subjt:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE

Query:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV
        PVI+YINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIA+R  KDFLV    +DK E+   +KI  + L +SM+V
Subjt:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV

Query:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF
          TPLK FSK KE + ++  DG E+RR TL+ERQ+KV+ F
Subjt:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]9.3e-18679.32Show/hide
Query:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER
        MASKKAAS SS ASD YTGPITR RSKGIIQ QDQGS +AQSILKQLMESPKAGIVI+ENPLY++ DSASS+S KEAHPD+MSVMMAD+  + AMAEMER
Subjt:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER

Query:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL
         IN LMK              QM+TRETAESSQTPVVK  DKGKNVVQENQPQQQS SVASLSVQQLQDMI NSIRAQ+GG  QTSF YSK YTKRID+L
Subjt:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL

Query:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE
        RMPLGYQPPKFQQFDGKGN KQH+AHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPE I+SWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE
Subjt:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE

Query:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV
        PVI+YINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIA+R  KDFLV    +DK E+   +KI  +   +SM+V
Subjt:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV

Query:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF
          TPLK FSK KE + ++  DG E+RR TL+ERQ+KV+ F
Subjt:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF

TrEMBL top hitse value%identityAlignment
A0A5A7SXL9 Ty3-gypsy retrotransposon protein7.4e-18979.19Show/hide
Query:  MASKKAASNSSIASDAYTGPITRIRSKGII--QEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEM
        MA+ KAAS SS+ASD+Y G +T+   K  +  QEQ+QG  + +  L+QL+ESPK GI+I +NPL++NS  AS+ S K +H +++SVMM D+TA+A + EM
Subjt:  MASKKAASNSSIASDAYTGPITRIRSKGII--QEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEM

Query:  ERNINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRID
        ER INFLMK              QM+  ET ESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQ+GG PQTSF YSK YTKRID
Subjt:  ERNINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRID

Query:  SLRMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRK
        +LRMPLGYQPPKFQQFDG+GN KQHIAHFVETCENAGSRGDQLV+QFVRSLKGNAFEWYTDLEPEVID+WEQLE EFLNRFYSTRR VSMMELTNTKQRK
Subjt:  SLRMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRK

Query:  GEPVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSM
        GEPVI+YINRWRALSLDCKD+LTELSAVEMCTQGMHW LLYILQGIKPRTFEELATRAHDMELSIAN+ AKDFLVQRT  D++EINDTKKIANNVLN+SM
Subjt:  GEPVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSM

Query:  LVQETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF
        LVQETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKV+ F
Subjt:  LVQETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF

A0A5A7TC87 Ty3-gypsy retrotransposon protein3.8e-18578.64Show/hide
Query:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER
        MASKK AS SS ASD+Y G +T+   K  +QEQ+QG  + +  L+QL+ESPK  I+I +NPL++NS  AS+ S KE+H +++SVMM D+T +A M EME+
Subjt:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER

Query:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL
         INFLMK              QM+  ETAESS+TPVVKATDKGKNVVQENQPQQQS+SVASLSVQQLQDMI NSIRAQ+GG  QTSF YSK YTKRID+L
Subjt:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL

Query:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE
        RMPLGYQPPKFQQFDGKGN KQHIAHFVE CEN GSRGDQLVR+FVRSLKGNAFEWYTDLEPEVIDSWEQLE EFLN FYSTRR VSMMELTNTKQRKGE
Subjt:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE

Query:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV
        PVI+YINRWRALSLDCKD+LTELSAVEMCTQGMH  LLYILQGIKPRTFEELATRAHDMELSIANR AKDFLVQRT  DK+EINDTKKIANNVLN+SMLV
Subjt:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV

Query:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF
        QETPLKSFSKRKETKHKRNHD DEKRRPTLRERQKKV+ F
Subjt:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF

A0A5D3CD35 Ty3-gypsy retrotransposon protein2.2e-18578.56Show/hide
Query:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER
        MASKK ASNSS+ASDAYTGPIT   SKGI QEQDQGSNVAQSILKQLMESPK GIVI+ENPLYDN D ASSKSKKEAHPD+M VMMADITA+AAMA+ME+
Subjt:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER

Query:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL
         INFLMK              QMRTRETAESSQTPVVKATDKGKNVVQ+NQPQQQSVS+ASLSVQ+LQDMIANSIRAQ+GG PQT+F YSK YTKRID+L
Subjt:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL

Query:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE
        RMPLGYQPPKFQQFDGKGN KQHIAHFVETC NAGSRGDQLVRQFVRSLKGNAFEWYT+LE EVID+WEQLEKEFL+RFYS RRTVSMMELTNTKQ+KGE
Subjt:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE

Query:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV
        PVI+YINRWRALSLDCKDRLTELS+VEMCTQGMHW LLYILQGIKPRTFEE ATRAHDMELSIA+R  KDF V    +DK E    +K+  + +  SM+V
Subjt:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV

Query:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFFLTL
          T LK FSKRKE + ++N DG E+RR TL+ER++KV+ F  L
Subjt:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFFLTL

A0A5D3DIN4 Ty3-gypsy retrotransposon protein4.5e-18679.09Show/hide
Query:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER
        MASKK AS SS ASD+Y G +T+   K  +QEQ+QG  + +  L+QL+ESPK  I+I +NPL++NS  AS+ S KE+H +++SVMM D+T +A M EME+
Subjt:  MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMER

Query:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL
         INFLMK              QM+  ETAESS+TPVVKATDKGKNVVQENQPQQQS+SVASLSVQQLQDMI NSIRAQ+GG  QTSF YSK YTKRID+L
Subjt:  NINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSL

Query:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE
        RMPLGYQPPKFQQFDGKGN KQHIAHFVE CENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLE EFLN FYSTRR VSMMELTNTKQRKGE
Subjt:  RMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGE

Query:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV
        PVI+YINRWRALSLDCKD+LTELSAVEMCTQGMH  LLYILQGIKPRTFEELATRAHDMELSIANR AKDFLVQRT  DK+EINDTKKIANNVLN+SMLV
Subjt:  PVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLV

Query:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF
        QETPLKSFSKRKETKHKRNHD DEKRRPTLRERQKKV+ F
Subjt:  QETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF

E5GCP6 Ty3-gypsy retrotransposon protein7.4e-18979.19Show/hide
Query:  MASKKAASNSSIASDAYTGPITRIRSKGII--QEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEM
        MA+ KAAS SS+ASD+Y G +T+   K  +  QEQ+QG  + +  L+QL+ESPK GI+I +NPL++NS  AS+ S K +H +++SVMM D+TA+A + EM
Subjt:  MASKKAASNSSIASDAYTGPITRIRSKGII--QEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEM

Query:  ERNINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRID
        ER INFLMK              QM+  ET ESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQ+GG PQTSF YSK YTKRID
Subjt:  ERNINFLMK--------------QMRTRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRID

Query:  SLRMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRK
        +LRMPLGYQPPKFQQFDG+GN KQHIAHFVETCENAGSRGDQLV+QFVRSLKGNAFEWYTDLEPEVID+WEQLE EFLNRFYSTRR VSMMELTNTKQRK
Subjt:  SLRMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRK

Query:  GEPVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSM
        GEPVI+YINRWRALSLDCKD+LTELSAVEMCTQGMHW LLYILQGIKPRTFEELATRAHDMELSIAN+ AKDFLVQRT  D++EINDTKKIANNVLN+SM
Subjt:  GEPVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSM

Query:  LVQETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF
        LVQETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKV+ F
Subjt:  LVQETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAAAGAAGGCTGCGTCCAACTCTTCTATTGCAAGCGACGCTTACACAGGACCCATCACCCGCATTCGTTCTAAAGGAATCATTCAAGAGCAGGATCAAGGTTC
TAACGTCGCTCAAAGCATTCTCAAGCAATTGATGGAGTCTCCTAAAGCTGGGATTGTCATCGAAGAAAATCCTTTGTATGATAATTCTGATTCTGCCTCTAGCAAGTCAA
AGAAGGAAGCACATCCTGACATGATGTCTGTCATGATGGCTGATATAACGGCCAAAGCTGCCATGGCAGAGATGGAGAGGAACATTAACTTCCTGATGAAACAAATGCGG
ACTCGTGAAACTGCTGAGTCAAGTCAAACTCCTGTTGTCAAAGCTACTGATAAAGGAAAGAATGTGGTACAGGAAAATCAACCACAACAACAATCAGTGTCTGTTGCTTC
TCTTTCAGTTCAGCAGCTACAGGATATGATCGCGAATTCCATTAGAGCTCAGTTTGGAGGACTGCCGCAAACTTCTTTCACGTACTCTAAGCTGTACACCAAGAGAATCG
ATAGCTTGAGAATGCCACTTGGGTACCAACCTCCAAAATTCCAGCAATTCGATGGAAAAGGCAACTCAAAGCAACATATCGCCCATTTCGTCGAAACATGTGAGAATGCA
GGATCAAGAGGAGACCAACTTGTCAGGCAATTCGTTCGAAGCTTGAAAGGAAATGCCTTCGAGTGGTACACCGATCTGGAGCCAGAAGTCATTGACAGCTGGGAACAATT
AGAAAAGGAGTTCCTCAACCGTTTCTATAGTACCAGACGTACCGTAAGCATGATGGAGCTTACAAACACCAAACAACGGAAGGGAGAGCCAGTCATCAATTACATAAACC
GATGGAGAGCTCTAAGTCTTGACTGCAAAGACCGACTCACCGAACTGTCAGCGGTAGAAATGTGCACCCAAGGCATGCATTGGGGACTCCTTTACATTTTACAAGGAATA
AAGCCTCGCACATTTGAAGAATTGGCAACTCGCGCCCATGATATGGAGTTGAGTATAGCCAACAGAGCAGCAAAAGATTTCTTGGTTCAAAGAACAATGCGTGACAAGAG
TGAAATCAATGACACTAAAAAGATTGCAAATAATGTCCTAAACAAGTCTATGCTTGTCCAAGAGACTCCATTGAAATCTTTCTCTAAAAGAAAAGAAACAAAACATAAAA
GAAATCATGATGGCGATGAAAAGCGACGCCCAACTCTTAGAGAAAGACAGAAAAAAGTTTTTTTCTTTCTGACTCTGATATTGCAGACATGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAAAGAAGGCTGCGTCCAACTCTTCTATTGCAAGCGACGCTTACACAGGACCCATCACCCGCATTCGTTCTAAAGGAATCATTCAAGAGCAGGATCAAGGTTC
TAACGTCGCTCAAAGCATTCTCAAGCAATTGATGGAGTCTCCTAAAGCTGGGATTGTCATCGAAGAAAATCCTTTGTATGATAATTCTGATTCTGCCTCTAGCAAGTCAA
AGAAGGAAGCACATCCTGACATGATGTCTGTCATGATGGCTGATATAACGGCCAAAGCTGCCATGGCAGAGATGGAGAGGAACATTAACTTCCTGATGAAACAAATGCGG
ACTCGTGAAACTGCTGAGTCAAGTCAAACTCCTGTTGTCAAAGCTACTGATAAAGGAAAGAATGTGGTACAGGAAAATCAACCACAACAACAATCAGTGTCTGTTGCTTC
TCTTTCAGTTCAGCAGCTACAGGATATGATCGCGAATTCCATTAGAGCTCAGTTTGGAGGACTGCCGCAAACTTCTTTCACGTACTCTAAGCTGTACACCAAGAGAATCG
ATAGCTTGAGAATGCCACTTGGGTACCAACCTCCAAAATTCCAGCAATTCGATGGAAAAGGCAACTCAAAGCAACATATCGCCCATTTCGTCGAAACATGTGAGAATGCA
GGATCAAGAGGAGACCAACTTGTCAGGCAATTCGTTCGAAGCTTGAAAGGAAATGCCTTCGAGTGGTACACCGATCTGGAGCCAGAAGTCATTGACAGCTGGGAACAATT
AGAAAAGGAGTTCCTCAACCGTTTCTATAGTACCAGACGTACCGTAAGCATGATGGAGCTTACAAACACCAAACAACGGAAGGGAGAGCCAGTCATCAATTACATAAACC
GATGGAGAGCTCTAAGTCTTGACTGCAAAGACCGACTCACCGAACTGTCAGCGGTAGAAATGTGCACCCAAGGCATGCATTGGGGACTCCTTTACATTTTACAAGGAATA
AAGCCTCGCACATTTGAAGAATTGGCAACTCGCGCCCATGATATGGAGTTGAGTATAGCCAACAGAGCAGCAAAAGATTTCTTGGTTCAAAGAACAATGCGTGACAAGAG
TGAAATCAATGACACTAAAAAGATTGCAAATAATGTCCTAAACAAGTCTATGCTTGTCCAAGAGACTCCATTGAAATCTTTCTCTAAAAGAAAAGAAACAAAACATAAAA
GAAATCATGATGGCGATGAAAAGCGACGCCCAACTCTTAGAGAAAGACAGAAAAAAGTTTTTTTCTTTCTGACTCTGATATTGCAGACATGTTAG
Protein sequenceShow/hide protein sequence
MASKKAASNSSIASDAYTGPITRIRSKGIIQEQDQGSNVAQSILKQLMESPKAGIVIEENPLYDNSDSASSKSKKEAHPDMMSVMMADITAKAAMAEMERNINFLMKQMR
TRETAESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQFGGLPQTSFTYSKLYTKRIDSLRMPLGYQPPKFQQFDGKGNSKQHIAHFVETCENA
GSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGEPVINYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGI
KPRTFEELATRAHDMELSIANRAAKDFLVQRTMRDKSEINDTKKIANNVLNKSMLVQETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVFFFLTLILQTC