; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0020245 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020245
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr09:18337590..18339218
RNA-Seq ExpressionPay0020245
SyntenyPay0020245
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037441.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.1e-29697.05Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIES DAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPP FQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQF+RTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSIANRGAKDFLI KSRSDKNE DDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNV PLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.1e-28796.96Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWE+ISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIK QYGGPAQTFSLY KPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFI+TCETAGTRGDLLVKQFVRTLKGNA DWYIDLEPESIDNWEQLERDFLNRFYSTR IVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSN
        LAREKKIELDIDEVAQTNH AIEMTSN
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSN

KAA0060505.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.9e-29295.39Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKR NT SRSREIQS ED PPFEVAKNIWEQISKPPKGGIVIKENPA+DEH S S+ S+E++P PNIMSVMVTNVDTSENRM ELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        +KVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIA+SIKTQYGGPAQTFSLYSKPYTKRI NL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFV+TLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQG KPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKI NSVIKE MV 
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGD+KRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQ GKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNV PLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

TYK03695.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.9e-29897.6Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALS IGKRPNT S SREIQS EDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFD Y+DLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNEL+DTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPF DSDVADMLEQLLENQLIQLP+CKRP+QA KVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIEL+IDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

TYK14887.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-29997.79Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQN TSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

TrEMBL top hitse value%identityAlignment
A0A5A7T777 Ty3-gypsy retrotransposon protein1.0e-29697.05Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIES DAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPP FQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQF+RTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSIANRGAKDFLI KSRSDKNE DDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNV PLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

A0A5A7URH1 Ty3-gypsy retrotransposon protein1.5e-28796.96Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWE+ISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIK QYGGPAQTFSLY KPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFI+TCETAGTRGDLLVKQFVRTLKGNA DWYIDLEPESIDNWEQLERDFLNRFYSTR IVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSN
        LAREKKIELDIDEVAQTNH AIEMTSN
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSN

A0A5A7V3R7 Ty3-gypsy retrotransposon protein9.0e-29395.39Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKR NT SRSREIQS ED PPFEVAKNIWEQISKPPKGGIVIKENPA+DEH S S+ S+E++P PNIMSVMVTNVDTSENRM ELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        +KVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIA+SIKTQYGGPAQTFSLYSKPYTKRI NL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFV+TLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQG KPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKI NSVIKE MV 
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGD+KRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQ GKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNV PLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

A0A5D3BX77 Retrotransposon gag protein1.9e-29897.6Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALS IGKRPNT S SREIQS EDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFD Y+DLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNEL+DTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPF DSDVADMLEQLLENQLIQLP+CKRP+QA KVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIEL+IDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

A0A5D3CSH0 Ty3-gypsy retrotransposon protein7.6e-30097.79Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQN TSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTCAAGGCAACACTTCCAAAGCTCTCAGTGACATCGGCAAACGGCCAAACACCCGTAGCCGCTCAAGGGAGATTCAGTCATCTGAAGATATGCCTCCTTTTGA
AGTTGCAAAGAATATTTGGGAGCAAATCTCTAAGCCACCAAAAGGTGGAATTGTAATCAAAGAGAATCCTGCGGTTGATGAACACAACTCGTTGTCTGAGTGCTCAAACG
AGGAGGTTCCACAGCCAAATATAATGTCAGTTATGGTAACTAACGTGGATACAAGTGAAAATAGAATGGCAGAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTG
GAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACATTGAAAGTCGTGATGCTGCTGAATCAAGTCATAAACATACTGTCAAGAATACTGACAAAGGGAAGGCAGT
TATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGGAGATGATTGCAAGCTCCATCAAAACGCAATATGGTGGACCTGCTC
AAACTTTCTCCTTGTACTCCAAACCATATACGAAGAGGATCGACAATCTCAGAATGCCGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCA
AAACAACATGTTGCTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTA
CATCGATCTGGAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACCGTTTCTATAGCACCCGACGTATCGTCAGCATGATGGAGTTGACAAACA
CAAGACAACAAAAGGGAGAACTAGTCATCGACTACATCAACCGATGGAGAGCTCTGAGTCTTGACTGTAAGGATCGACTCACCGAACTGTCTGCAGTGGAGATGTGCACC
CAAGGCATGCATTGGGGACTTCTTTATATTTTACAGGGAATAAAACCTCGCACGTTCGAAGAGTTGGCGACTCGTGCCCATGATATGGAATTGAGTATCGCCAATAGAGG
AGCAAAAGATTTCTTGATTCCAAAATCGAGGAGTGACAAGAATGAACTTGATGACACTAAAAAGATTGCAAATAGTGTCATAAAAGAGTCAATGGTTGTTCATGCAACTC
CTTTGAAATCTTTCTCTAAAAGAAAAGAAACAAAAATTGAAAGAAAGCATGATGGCGATGAAAAGCGACAGTCAACTCTTAAAGAAAGACAGGAAAAAGTTTATCCATTT
CCTGACTCTGATGTTGCAGACATGTTAGAGCAGTTGCTAGAGAACCAACTTATTCAGCTGCCAGAATGCAAACGACCAGAACAAGCAGGAAAAGTAGATGATCCTAACTA
CTGCAAGTATCATCGGGTCATTAGTCACCCTGTTGAAAAGTGTTTCGTGTTGAAAGAGCTAATTCTAAAGTTGGCTCGTGAAAAGAAGATCGAGCTAGATATTGATGAAG
TAGCTCAGACGAATCATGTTGCGATCGAGATGACTTCAAATGTTCCGCCATTAACACAACTTGATGATCAAAGAAAAAGCTTGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTCAAGGCAACACTTCCAAAGCTCTCAGTGACATCGGCAAACGGCCAAACACCCGTAGCCGCTCAAGGGAGATTCAGTCATCTGAAGATATGCCTCCTTTTGA
AGTTGCAAAGAATATTTGGGAGCAAATCTCTAAGCCACCAAAAGGTGGAATTGTAATCAAAGAGAATCCTGCGGTTGATGAACACAACTCGTTGTCTGAGTGCTCAAACG
AGGAGGTTCCACAGCCAAATATAATGTCAGTTATGGTAACTAACGTGGATACAAGTGAAAATAGAATGGCAGAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTG
GAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACATTGAAAGTCGTGATGCTGCTGAATCAAGTCATAAACATACTGTCAAGAATACTGACAAAGGGAAGGCAGT
TATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGGAGATGATTGCAAGCTCCATCAAAACGCAATATGGTGGACCTGCTC
AAACTTTCTCCTTGTACTCCAAACCATATACGAAGAGGATCGACAATCTCAGAATGCCGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCA
AAACAACATGTTGCTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTA
CATCGATCTGGAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACCGTTTCTATAGCACCCGACGTATCGTCAGCATGATGGAGTTGACAAACA
CAAGACAACAAAAGGGAGAACTAGTCATCGACTACATCAACCGATGGAGAGCTCTGAGTCTTGACTGTAAGGATCGACTCACCGAACTGTCTGCAGTGGAGATGTGCACC
CAAGGCATGCATTGGGGACTTCTTTATATTTTACAGGGAATAAAACCTCGCACGTTCGAAGAGTTGGCGACTCGTGCCCATGATATGGAATTGAGTATCGCCAATAGAGG
AGCAAAAGATTTCTTGATTCCAAAATCGAGGAGTGACAAGAATGAACTTGATGACACTAAAAAGATTGCAAATAGTGTCATAAAAGAGTCAATGGTTGTTCATGCAACTC
CTTTGAAATCTTTCTCTAAAAGAAAAGAAACAAAAATTGAAAGAAAGCATGATGGCGATGAAAAGCGACAGTCAACTCTTAAAGAAAGACAGGAAAAAGTTTATCCATTT
CCTGACTCTGATGTTGCAGACATGTTAGAGCAGTTGCTAGAGAACCAACTTATTCAGCTGCCAGAATGCAAACGACCAGAACAAGCAGGAAAAGTAGATGATCCTAACTA
CTGCAAGTATCATCGGGTCATTAGTCACCCTGTTGAAAAGTGTTTCGTGTTGAAAGAGCTAATTCTAAAGTTGGCTCGTGAAAAGAAGATCGAGCTAGATATTGATGAAG
TAGCTCAGACGAATCATGTTGCGATCGAGATGACTTCAAATGTTCCGCCATTAACACAACTTGATGATCAAAGAAAAAGCTTGATTTAA
Protein sequenceShow/hide protein sequence
MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELEKKVNMLMKVV
EERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNP
KQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCT
QGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPF
PDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI