; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0020355 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020355
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr12:15961800..15962698
RNA-Seq ExpressionPay0020355
SyntenyPay0020355
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059103.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.1e-10670.47Show/hide
Query:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------
        M KP EIIPFYAALLEACSSTKNL+T KQIHALTI L IS++HFIRTKLASTYAACAQLPQA TIFSFATRRPTYLFNALIRAHS               
Subjt:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------

Query:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER
                         SC+GLSSLRLGRQVHGAL I+G S DLPSLNALITMY KCG L                        YGVHGMFG+VF LFER
Subjt:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER

Query:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
        MV+EGQ+PDELTFTSLLTAC HGGLIEKGKEYF  M+ +F LRPGLQHYTC+VDLLGRLGQVEEAEKLIMEME+EPDEALWGAML ACRIHG+ DVAD
Subjt:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

KAG7019344.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-10469.13Show/hide
Query:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------
        M KP++IIPFYAALL+ACSSTKN  T KQIHALTIRL IS++ FIRTKLASTYAAC  LPQATTIFSFATRRPT+LFNALIRAHS               
Subjt:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------

Query:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER
                         SC+GLSSLRLGRQVHGA+ I+G STDLP+LNALITMYGKCG L                        YGVHGMF +VFGLFER
Subjt:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER

Query:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
        MVEEGQKPDELTFT+LLTAC HGGLIE+GKEYF MM+  FDLRPGL+HYTC+VDLLGR+GQVEEAEKLIMEMEIEPDEALWGA+L ACRIHGKA+VAD
Subjt:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

XP_004144516.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis sativus]4.4e-10871.48Show/hide
Query:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------
        M KP EIIPFYAALL+ACSST NL+T KQIHALTI L IS++HFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFN LIRAHS               
Subjt:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------

Query:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER
                         SC+GLSSLRLGRQVHGAL I+G S DLPSLNALITMYGKCG L                        YGVHGMFG+VF LFER
Subjt:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER

Query:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
        MVEEGQKPDELTFTSLLTAC HGGLIEKGKEYF MM+ +F LRPGLQHYTC+VDLLGR GQVEEAEKLIMEMEIEPDEALWGAML ACRIHGK DVAD
Subjt:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

XP_008455480.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucumis melo]1.1e-10670.47Show/hide
Query:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------
        M KP EIIPFYAALLEACSSTKNL+T KQIHALTI L IS++HFIRTKLASTYAACAQLPQA TIFSFATRRPTYLFNALIRAHS               
Subjt:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------

Query:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER
                         SC+GLSSLRLGRQVHGAL I+G S DLPSLNALITMY KCG L                        YGVHGMFG+VF LFER
Subjt:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER

Query:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
        MV+EGQ+PDELTFTSLLTAC HGGLIEKGKEYF  M+ +F LRPGLQHYTC+VDLLGRLGQVEEAEKLIMEME+EPDEALWGAML ACRIHG+ DVAD
Subjt:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

XP_023520705.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita pepo subsp. pepo]1.2e-10569.8Show/hide
Query:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------
        M KP++IIPFYAALL+ACSSTKN  T KQIHALTIRL IS++ FIRTKLASTYAAC  LPQATTIFSFATRRPT+LFNALIRAHS               
Subjt:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------

Query:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER
                         SC+GLSSLRLGRQVHGA+ I+G STDLP+LNALITMYGKCG L                        YGVHGMFG+VFGLFER
Subjt:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER

Query:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
        MVEEGQKPDELTFT+LLTAC HGGLIE+GKEYF MMK  FDLRPGL+HYTC+VDLLGR+GQVEEAEKLIMEMEIEPDEALWGA+L ACRIHGKA+VAD
Subjt:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

TrEMBL top hitse value%identityAlignment
A0A0A0K1F7 Uncharacterized protein2.1e-10871.48Show/hide
Query:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------
        M KP EIIPFYAALL+ACSST NL+T KQIHALTI L IS++HFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFN LIRAHS               
Subjt:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------

Query:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER
                         SC+GLSSLRLGRQVHGAL I+G S DLPSLNALITMYGKCG L                        YGVHGMFG+VF LFER
Subjt:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER

Query:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
        MVEEGQKPDELTFTSLLTAC HGGLIEKGKEYF MM+ +F LRPGLQHYTC+VDLLGR GQVEEAEKLIMEMEIEPDEALWGAML ACRIHGK DVAD
Subjt:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

A0A1S3C0K0 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like5.2e-10770.47Show/hide
Query:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------
        M KP EIIPFYAALLEACSSTKNL+T KQIHALTI L IS++HFIRTKLASTYAACAQLPQA TIFSFATRRPTYLFNALIRAHS               
Subjt:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------

Query:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER
                         SC+GLSSLRLGRQVHGAL I+G S DLPSLNALITMY KCG L                        YGVHGMFG+VF LFER
Subjt:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER

Query:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
        MV+EGQ+PDELTFTSLLTAC HGGLIEKGKEYF  M+ +F LRPGLQHYTC+VDLLGRLGQVEEAEKLIMEME+EPDEALWGAML ACRIHG+ DVAD
Subjt:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

A0A5A7UT42 Pentatricopeptide repeat-containing protein5.2e-10770.47Show/hide
Query:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------
        M KP EIIPFYAALLEACSSTKNL+T KQIHALTI L IS++HFIRTKLASTYAACAQLPQA TIFSFATRRPTYLFNALIRAHS               
Subjt:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------

Query:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER
                         SC+GLSSLRLGRQVHGAL I+G S DLPSLNALITMY KCG L                        YGVHGMFG+VF LFER
Subjt:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER

Query:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
        MV+EGQ+PDELTFTSLLTAC HGGLIEKGKEYF  M+ +F LRPGLQHYTC+VDLLGRLGQVEEAEKLIMEME+EPDEALWGAML ACRIHG+ DVAD
Subjt:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

A0A6J1EHW3 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like1.9e-10468.79Show/hide
Query:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------
        M KP++IIPFYAALL+ACSSTKN  T KQIHALTIRL IS++ FIRTKLASTYAAC  LPQATTIFSFATRRPT+LFNALIRAHS               
Subjt:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------

Query:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER
                         SC+GLSSLRLGRQVHGA+ I+G STDLP+LNALITMYGKCG L                        YGVHGMF +VFGLFER
Subjt:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER

Query:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
        MVEEGQKPDELTFT+LLTAC HGGLIE+GKEYF MM+  FDLRPGL+HYTC+VDLLGR+GQVEEAEKLIMEMEIEPDEALWGA+L ACRIHGK +VAD
Subjt:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

A0A6J1I7X0 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like1.6e-10368.33Show/hide
Query:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------
        M KP++IIPFYAALL+ACSSTKN +T KQIHALTIRL IS++ FIRTKLASTYAAC  LPQATTIFSFATRRPT+LFNALIRAHS               
Subjt:  MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------

Query:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER
                         SC+GLSSLRLGRQVHG + I+G STDLP+LNALITMYGKCG L                        YGVHGMFG+VFGLFER
Subjt:  -----------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFER

Query:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLI--MEMEIEPDEALWGAMLIACRIHGKADVAD
        MVEEGQKPDELTFT+LLTAC HGGLIE+GKEYF MMK  F+L+PGL+HYTC+VDLLGR+GQVEEAEKLI  MEMEIEPDEALWGA+L ACRIHGKA+VAD
Subjt:  MVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLI--MEMEIEPDEALWGAMLIACRIHGKADVAD

SwissProt top hitse value%identityAlignment
O81767 Pentatricopeptide repeat-containing protein At4g339906.7e-3539.66Show/hide
Query:  SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYLS-----------------------YGVHGMFGDVFGLFERMVEEGQKPDELTFTSLL
        +CS   +LR G ++HG L  +GL  D+  + +L  MYGKCG L                        +G HG       LF+ M++EG KPD +TF +LL
Subjt:  SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYLS-----------------------YGVHGMFGDVFGLFERMVEEGQKPDELTFTSLL

Query:  TACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADV
        +AC H GL+++G+  F MM+  + + P L+HY C+VD+ GR GQ+E A K I  M ++PD ++WGA+L ACR+HG  D+
Subjt:  TACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADV

P93005 Pentatricopeptide repeat-containing protein At2g336803.3e-3431.29Show/hide
Query:  KPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAH------------------
        KP E       +L ACS    L   KQ+H+  ++L    + F  T L   YA    L  A   F     R   L+ +LI  +                  
Subjt:  KPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAH------------------

Query:  --------------SSCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYLSYG-----------------------VHGMFGDVFGLFERMV
                       +CS L++L LG+QVHG    HG   ++P  +AL TMY KCG L  G                        +G   +   LFE M+
Subjt:  --------------SSCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYLSYG-----------------------VHGMFGDVFGLFERMV

Query:  EEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADV
         EG +PD++TF ++++AC H G +E+G  YF MM  +  L P + HY C+VDLL R GQ++EA++ I    I+    LW  +L AC+ HGK ++
Subjt:  EEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADV

Q9C507 Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial8.7e-3531.6Show/hide
Query:  AALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS--------------------------
        A+ + AC +   +   KQIH   IR  +S + F++  L   Y+    +  A+T+F+    R    +N+++   S                          
Subjt:  AALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS--------------------------

Query:  ------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFERMVEEGQKPDEL
              +CS + SL  G+ VH  L I GL  DL +  ALI MY KCG L                       +YG+HG  G     F +MVE G KP+E+
Subjt:  ------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFERMVEEGQKPDEL

Query:  TFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVADA
         F ++L+AC H G +E+GK YF +MK  F + P  +H+ C +DLL R G ++EA + I EM    D ++WG+++  CRIH K D+  A
Subjt:  TFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVADA

Q9SJZ3 Pentatricopeptide repeat-containing protein At2g22410, mitochondrial3.3e-3430.48Show/hide
Query:  IPFYAALLEACSSTKNLYTHKQI-HALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNA---------------------------
        IP   AL++  S   +++  ++I   L  R  +S+     T + S YA C  L  +  +F     +   L+NA                           
Subjt:  IPFYAALLEACSSTKNLYTHKQI-HALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNA---------------------------

Query:  -----LIRAHSSCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYLS-----------------------YGVHGMFGDVFGLFERMVEEGQ
             +I   S+CS L +L +G  +H  +  + LS ++    +L+ MY KCG +S                         +HG        F  M++ G 
Subjt:  -----LIRAHSSCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYLS-----------------------YGVHGMFGDVFGLFERMVEEGQ

Query:  KPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
         PDE+TF  LL+ACCHGG+I+ G++YF  MK +F+L P L+HY+ +VDLLGR G +EEA++L+  M +E D A+WGA+L  CR+HG  ++ +
Subjt:  KPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

Q9STF3 Pentatricopeptide repeat-containing protein At3g46790, chloroplastic2.5e-3730.95Show/hide
Query:  YAALLEACSSTKNLYTH----KQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------------
        Y  +L+AC +++    H    K+IHA   R   S + +I T L   YA    +  A+ +F     R    ++A+I  ++                     
Subjt:  YAALLEACSSTKNLYTH----KQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------------

Query:  -------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFERMVEE
                     +C+ L++L  G+ +HG +   GL + LP ++AL+TMYG+CG L                       SYGVHG       +FE M+  
Subjt:  -------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFERMVEE

Query:  GQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
        G  P  +TF S+L AC H GL+E+GK  F  M R   ++P ++HY C+VDLLGR  +++EA K++ +M  EP   +WG++L +CRIHG  ++A+
Subjt:  GQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

Arabidopsis top hitse value%identityAlignment
AT1G69350.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.2e-3631.6Show/hide
Query:  AALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS--------------------------
        A+ + AC +   +   KQIH   IR  +S + F++  L   Y+    +  A+T+F+    R    +N+++   S                          
Subjt:  AALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS--------------------------

Query:  ------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFERMVEEGQKPDEL
              +CS + SL  G+ VH  L I GL  DL +  ALI MY KCG L                       +YG+HG  G     F +MVE G KP+E+
Subjt:  ------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFERMVEEGQKPDEL

Query:  TFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVADA
         F ++L+AC H G +E+GK YF +MK  F + P  +H+ C +DLL R G ++EA + I EM    D ++WG+++  CRIH K D+  A
Subjt:  TFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVADA

AT2G22410.1 SLOW GROWTH 12.4e-3530.48Show/hide
Query:  IPFYAALLEACSSTKNLYTHKQI-HALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNA---------------------------
        IP   AL++  S   +++  ++I   L  R  +S+     T + S YA C  L  +  +F     +   L+NA                           
Subjt:  IPFYAALLEACSSTKNLYTHKQI-HALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNA---------------------------

Query:  -----LIRAHSSCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYLS-----------------------YGVHGMFGDVFGLFERMVEEGQ
             +I   S+CS L +L +G  +H  +  + LS ++    +L+ MY KCG +S                         +HG        F  M++ G 
Subjt:  -----LIRAHSSCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYLS-----------------------YGVHGMFGDVFGLFERMVEEGQ

Query:  KPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
         PDE+TF  LL+ACCHGG+I+ G++YF  MK +F+L P L+HY+ +VDLLGR G +EEA++L+  M +E D A+WGA+L  CR+HG  ++ +
Subjt:  KPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.4e-3531.29Show/hide
Query:  KPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAH------------------
        KP E       +L ACS    L   KQ+H+  ++L    + F  T L   YA    L  A   F     R   L+ +LI  +                  
Subjt:  KPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAH------------------

Query:  --------------SSCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYLSYG-----------------------VHGMFGDVFGLFERMV
                       +CS L++L LG+QVHG    HG   ++P  +AL TMY KCG L  G                        +G   +   LFE M+
Subjt:  --------------SSCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYLSYG-----------------------VHGMFGDVFGLFERMV

Query:  EEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADV
         EG +PD++TF ++++AC H G +E+G  YF MM  +  L P + HY C+VDLL R GQ++EA++ I    I+    LW  +L AC+ HGK ++
Subjt:  EEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADV

AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.7e-3830.95Show/hide
Query:  YAALLEACSSTKNLYTH----KQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------------
        Y  +L+AC +++    H    K+IHA   R   S + +I T L   YA    +  A+ +F     R    ++A+I  ++                     
Subjt:  YAALLEACSSTKNLYTH----KQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHS---------------------

Query:  -------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFERMVEE
                     +C+ L++L  G+ +HG +   GL + LP ++AL+TMYG+CG L                       SYGVHG       +FE M+  
Subjt:  -------------SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYL-----------------------SYGVHGMFGDVFGLFERMVEE

Query:  GQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD
        G  P  +TF S+L AC H GL+E+GK  F  M R   ++P ++HY C+VDLLGR  +++EA K++ +M  EP   +WG++L +CRIHG  ++A+
Subjt:  GQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADVAD

AT4G33990.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.8e-3639.66Show/hide
Query:  SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYLS-----------------------YGVHGMFGDVFGLFERMVEEGQKPDELTFTSLL
        +CS   +LR G ++HG L  +GL  D+  + +L  MYGKCG L                        +G HG       LF+ M++EG KPD +TF +LL
Subjt:  SCSGLSSLRLGRQVHGALFIHGLSTDLPSLNALITMYGKCGYLS-----------------------YGVHGMFGDVFGLFERMVEEGQKPDELTFTSLL

Query:  TACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADV
        +AC H GL+++G+  F MM+  + + P L+HY C+VD+ GR GQ+E A K I  M ++PD ++WGA+L ACR+HG  D+
Subjt:  TACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIEPDEALWGAMLIACRIHGKADV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAACCAAAAGAAATAATCCCCTTCTACGCTGCTCTCCTCGAAGCGTGCTCCTCCACCAAGAACCTCTACACTCACAAGCAAATTCACGCTCTTACCATAAGACT
CCAAATCTCTTACAACCATTTCATTCGAACCAAGCTCGCTTCAACCTACGCCGCCTGCGCCCAACTCCCTCAAGCCACCACCATCTTCTCCTTCGCCACTCGTCGCCCCA
CCTACCTCTTCAATGCTCTCATCAGAGCCCACTCTTCATGTTCCGGCCTCTCCTCCTTGCGCCTTGGCCGCCAGGTTCATGGGGCTCTTTTCATTCATGGCTTATCTACA
GATTTGCCTAGTTTGAATGCTCTGATTACCATGTATGGCAAATGCGGGTATTTGAGTTATGGTGTTCATGGGATGTTTGGGGATGTGTTTGGGTTGTTTGAGAGGATGGT
AGAAGAAGGGCAAAAGCCGGATGAGCTCACTTTTACATCTCTTCTCACGGCGTGTTGCCATGGAGGGTTGATTGAGAAAGGGAAGGAGTATTTTGTTATGATGAAAAGGA
AGTTTGATTTGAGACCTGGTTTGCAACATTATACTTGCCTGGTGGATTTGCTTGGGAGATTGGGGCAAGTGGAAGAAGCAGAGAAGTTGATAATGGAGATGGAGATCGAG
CCTGATGAGGCTTTGTGGGGCGCCATGTTGATTGCTTGTAGGATTCATGGGAAGGCTGATGTTGCTGATGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAAACCAAAAGAAATAATCCCCTTCTACGCTGCTCTCCTCGAAGCGTGCTCCTCCACCAAGAACCTCTACACTCACAAGCAAATTCACGCTCTTACCATAAGACT
CCAAATCTCTTACAACCATTTCATTCGAACCAAGCTCGCTTCAACCTACGCCGCCTGCGCCCAACTCCCTCAAGCCACCACCATCTTCTCCTTCGCCACTCGTCGCCCCA
CCTACCTCTTCAATGCTCTCATCAGAGCCCACTCTTCATGTTCCGGCCTCTCCTCCTTGCGCCTTGGCCGCCAGGTTCATGGGGCTCTTTTCATTCATGGCTTATCTACA
GATTTGCCTAGTTTGAATGCTCTGATTACCATGTATGGCAAATGCGGGTATTTGAGTTATGGTGTTCATGGGATGTTTGGGGATGTGTTTGGGTTGTTTGAGAGGATGGT
AGAAGAAGGGCAAAAGCCGGATGAGCTCACTTTTACATCTCTTCTCACGGCGTGTTGCCATGGAGGGTTGATTGAGAAAGGGAAGGAGTATTTTGTTATGATGAAAAGGA
AGTTTGATTTGAGACCTGGTTTGCAACATTATACTTGCCTGGTGGATTTGCTTGGGAGATTGGGGCAAGTGGAAGAAGCAGAGAAGTTGATAATGGAGATGGAGATCGAG
CCTGATGAGGCTTTGTGGGGCGCCATGTTGATTGCTTGTAGGATTCATGGGAAGGCTGATGTTGCTGATGCCTGA
Protein sequenceShow/hide protein sequence
MSKPKEIIPFYAALLEACSSTKNLYTHKQIHALTIRLQISYNHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHSSCSGLSSLRLGRQVHGALFIHGLST
DLPSLNALITMYGKCGYLSYGVHGMFGDVFGLFERMVEEGQKPDELTFTSLLTACCHGGLIEKGKEYFVMMKRKFDLRPGLQHYTCLVDLLGRLGQVEEAEKLIMEMEIE
PDEALWGAMLIACRIHGKADVADA