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Pay0020468 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020468
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:29813987..29814784
RNA-Seq ExpressionPay0020468
SyntenyPay0020468
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575236.1 hypothetical protein SDJN03_25875, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1639.38Show/hide
Query:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD
        M FF L Q H   EA+ V+   ++  + LKFS    SIM +ASP + CII++QL P  F+TY C  LH+ ++        M +    GFSSL FSF    
Subjt:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD

Query:  PHDTYGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRF
           T  + A L F    R         L PS+   D+G +D+ TFV++ES+EFINII  F
Subjt:  PHDTYGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRF

XP_008458680.1 PREDICTED: uncharacterized protein LOC103498008 [Cucumis melo]2.6e-94100Show/hide
Query:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD
        MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD
Subjt:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD

Query:  PHDTYGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNGNSNMPRLLSI
        PHDTYGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNGNSNMPRLLSI
Subjt:  PHDTYGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNGNSNMPRLLSI

XP_022958855.1 uncharacterized protein LOC111460009 [Cucurbita moschata]5.3e-3144.13Show/hide
Query:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----
        +H  ++A SVL ET +D FD+KFSP +FSIM A +PSS CII LQLSPQ F  Y+C  LH+KF++   F D M   +  GFSSL F+F E D  D+    
Subjt:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----

Query:  -------------------YGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFD
                             + A+L+F +   G      + ++PS + +DVG FD GTFVSI+SQEFINI+  F DFD
Subjt:  -------------------YGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFD

XP_023006011.1 uncharacterized protein LOC111498888 [Cucurbita maxima]3.3e-3345.81Show/hide
Query:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----
        +H  ++A SVL ET +D FD+KFSP +FSIM A +PSSRCII+LQLSPQ F  Y+C  LH+KF++  +F D M   +  GFSSL F+F E D  D+    
Subjt:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----

Query:  -------------------YGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFD
                             + A+L+F +   G      + ++PSS+ +DVG FDFGTFVSI+SQEFINI+  F DFD
Subjt:  -------------------YGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFD

XP_023548336.1 uncharacterized protein LOC111807004 [Cucurbita pepo subsp. pepo]7.4e-3345.81Show/hide
Query:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----
        +H  ++A SVL ET +D FD+KFSP +FSIM A +PSSRCII+LQLSPQ F  Y+C  LH+KF++   F D M   +  GFSSL F+F E D  D+    
Subjt:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----

Query:  -------------------YGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFD
                             + A+L+F +   G      + ++PSS+ +DVG FDFGTFVSI+SQEFINI+  F DFD
Subjt:  -------------------YGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFD

TrEMBL top hitse value%identityAlignment
A0A1S3C9N3 uncharacterized protein LOC1034980081.3e-94100Show/hide
Query:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD
        MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD
Subjt:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD

Query:  PHDTYGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNGNSNMPRLLSI
        PHDTYGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNGNSNMPRLLSI
Subjt:  PHDTYGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNGNSNMPRLLSI

A0A5D3BU35 LINE-1 retrotransposable element ORF2 protein1.5e-1539.75Show/hide
Query:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIF-RTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQ
        M  F L +IH F++A+SVL       F+LKFSP +FSIM   +PS  C I+LQL P  F + Y C  LH+ +++   F   M + + TGFSSL FSF   
Subjt:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIF-RTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQ

Query:  DPHDTYGSDALLQFTNSERGCHMIK-TVRLYPSSEKIDV--GEFDFGTFVSIESQEFINII
           D+  +D     T   R  H+ +    +Y S   +D    + D+ TFVS  SQEFINI+
Subjt:  DPHDTYGSDALLQFTNSERGCHMIK-TVRLYPSSEKIDV--GEFDFGTFVSIESQEFINII

A0A6J1H4N0 uncharacterized protein LOC1114600092.6e-3144.13Show/hide
Query:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----
        +H  ++A SVL ET +D FD+KFSP +FSIM A +PSS CII LQLSPQ F  Y+C  LH+KF++   F D M   +  GFSSL F+F E D  D+    
Subjt:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----

Query:  -------------------YGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFD
                             + A+L+F +   G      + ++PS + +DVG FD GTFVSI+SQEFINI+  F DFD
Subjt:  -------------------YGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFD

A0A6J1KWL1 uncharacterized protein LOC1114988881.6e-3345.81Show/hide
Query:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----
        +H  ++A SVL ET +D FD+KFSP +FSIM A +PSSRCII+LQLSPQ F  Y+C  LH+KF++  +F D M   +  GFSSL F+F E D  D+    
Subjt:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----

Query:  -------------------YGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFD
                             + A+L+F +   G      + ++PSS+ +DVG FDFGTFVSI+SQEFINI+  F DFD
Subjt:  -------------------YGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFD

A0A6J1L2R2 uncharacterized protein LOC1114993087.5e-1534.78Show/hide
Query:  FELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHD
        F L Q+   ++A SV+  +++D  D+KFS  +F+IM  + P+   +I+L L PQ F  YVC  L   + F +     M + + +GF+SL F+        
Subjt:  FELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHD

Query:  TYGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFD
        TY   A L+F  +  G        L PS + ++VG+FDF +FVS++S+EF+NI+  +  FD
Subjt:  TYGSDALLQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTTTTTGAGCTTCCCCAAATCCATGGCTTCCTCGAAGCGATTTCCGTCCTTACCGAGACATCCGAGGATGAGTTTGATCTCAAATTCTCACCGGCAATATTCTC
GATAATGGTCGCTGCATCACCTTCCTCTCGTTGCATCATTTCCCTACAATTATCCCCTCAAATCTTTAGGACATATGTCTGCCCAACACTTCACCATAAATTCCTTTTCT
TCCGAGCCTTTTGTGATACCATGCAAGAATGCCAAAGTACAGGCTTTTCTTCATTGATTTTCAGTTTTCAAGAACAAGATCCCCACGATACGTATGGTTCTGATGCACTT
CTCCAATTTACTAATTCTGAACGTGGTTGTCATATGATAAAAACTGTTCGATTGTACCCTTCTTCTGAAAAGATAGATGTGGGTGAATTTGATTTTGGAACTTTTGTGTC
AATTGAATCACAAGAATTCATAAATATTATCAAACGGTTTGTTGATTTTGATAATGGTAACTCAAATATGCCTCGTCTTCTTTCCATATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCTTTTTTGAGCTTCCCCAAATCCATGGCTTCCTCGAAGCGATTTCCGTCCTTACCGAGACATCCGAGGATGAGTTTGATCTCAAATTCTCACCGGCAATATTCTC
GATAATGGTCGCTGCATCACCTTCCTCTCGTTGCATCATTTCCCTACAATTATCCCCTCAAATCTTTAGGACATATGTCTGCCCAACACTTCACCATAAATTCCTTTTCT
TCCGAGCCTTTTGTGATACCATGCAAGAATGCCAAAGTACAGGCTTTTCTTCATTGATTTTCAGTTTTCAAGAACAAGATCCCCACGATACGTATGGTTCTGATGCACTT
CTCCAATTTACTAATTCTGAACGTGGTTGTCATATGATAAAAACTGTTCGATTGTACCCTTCTTCTGAAAAGATAGATGTGGGTGAATTTGATTTTGGAACTTTTGTGTC
AATTGAATCACAAGAATTCATAAATATTATCAAACGGTTTGTTGATTTTGATAATGGTAACTCAAATATGCCTCGTCTTCTTTCCATATAG
Protein sequenceShow/hide protein sequence
MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDTYGSDAL
LQFTNSERGCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNGNSNMPRLLSI