; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0020498 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020498
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr07:2957928..2971250
RNA-Seq ExpressionPay0020498
SyntenyPay0020498
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064677.1 chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo var. makuwa]3.6e-12798.73Show/hide
Query:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
        MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
Subjt:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML
        SKLK  TLDYLGIPGLHLAGSQGVIVIAICQAILM+
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML

XP_004145567.1 chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Cucumis sativus]1.5e-12596.19Show/hide
Query:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
        MAL+QPHTPASSISSSSAS +GTYLQQ RPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSA+PFTAVKAIANSPLG SLQRQLEKKK SAVANSSKF
Subjt:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQK+FNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML
        SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILM+
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML

XP_008453032.2 PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo]2.9e-12999.58Show/hide
Query:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
        MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
Subjt:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML
        SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILM+
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML

XP_008453034.2 PREDICTED: chlorophyll a-b binding protein, chloroplastic isoform X3 [Cucumis melo]5.7e-149100Show/hide
Query:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
        MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
Subjt:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMLLSSRSASAILLPHSCLLLHDLLYSISHFSSLLRFW
        SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMLLSSRSASAILLPHSCLLLHDLLYSISHFSSLLRFW
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMLLSSRSASAILLPHSCLLLHDLLYSISHFSSLLRFW

XP_011654293.1 chlorophyll a-b binding protein 7, chloroplastic isoform X3 [Cucumis sativus]5.3e-13995.83Show/hide
Query:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
        MAL+QPHTPASSISSSSAS +GTYLQQ RPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSA+PFTAVKAIANSPLG SLQRQLEKKK SAVANSSKF
Subjt:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQK+FNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMLLSSRSASAILLPHSCLLLHDLLYSISHF
        SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML SSRSASAILLPHSCLLL DLLYSI HF
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMLLSSRSASAILLPHSCLLLHDLLYSISHF

TrEMBL top hitse value%identityAlignment
A0A1S3BVA0 Chlorophyll a-b binding protein, chloroplastic2.7e-149100Show/hide
Query:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
        MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
Subjt:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMLLSSRSASAILLPHSCLLLHDLLYSISHFSSLLRFW
        SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMLLSSRSASAILLPHSCLLLHDLLYSISHFSSLLRFW
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMLLSSRSASAILLPHSCLLLHDLLYSISHFSSLLRFW

A0A1S3BWE1 Chlorophyll a-b binding protein, chloroplastic1.4e-12999.58Show/hide
Query:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
        MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
Subjt:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML
        SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILM+
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML

A0A5A7VCG1 Chlorophyll a-b binding protein, chloroplastic1.7e-12798.73Show/hide
Query:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
        MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
Subjt:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML
        SKLK  TLDYLGIPGLHLAGSQGVIVIAICQAILM+
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML

A0A6J1FCV0 Chlorophyll a-b binding protein, chloroplastic9.9e-11588.98Show/hide
Query:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
        MAL QPHT  S+ISSSSASFYG+ LQQLR  T  LNLR++ SI HR TC ASWQELAGVLIFSA+PFTAVKAIANSP GESLQRQLEKKK +AVA SSKF
Subjt:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAE+ARKDSSWYGE+RPRWLGPLPY+YPKYLTGELPGDYGFDIAGLSEDPVAF+KYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML
        SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILM+
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML

A0A6J1IGJ6 Chlorophyll a-b binding protein, chloroplastic6.4e-11487.71Show/hide
Query:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF
        MAL  PHT  S++SSSSASFYG+ LQQLR  T  LNLR++ SI HR TC ASWQELAG+LIFSA+PFTAVKAIANSP GESLQRQLEKKK +AVA SSKF
Subjt:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAE+ARKDSSWYGE+RPRWLGPLPY+YPKYLTGELPGDYGFDIAGLSEDPVAF+KYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML
        SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILM+
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML

SwissProt top hitse value%identityAlignment
P07370 Chlorophyll a-b binding protein 1B, chloroplastic3.3e-2745.93Show/hide
Query:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KA+A+ A   S WYG +R ++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H RWAML +LG + PE+L   G   F E +W++ G 
Subjt:  KALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILM
               LDYLG P   L  +Q ++ I  CQ +LM
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILM

P14278 Chlorophyll a-b binding protein 4, chloroplastic2.0e-2748Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        S WYGE+RP++LGP     P YLTGE PGDYG+D AGLS DP  F +    E++H RWAML +LG + PEIL   G   F E +W++ G        LDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILM
        LG P  +L  +Q ++ I  CQ +LM
Subjt:  LGIPGLHLAGSQGVIVIAICQAILM

P20866 Chlorophyll a-b binding protein, chloroplastic2.6e-2741.25Show/hide
Query:  GESLQR---QLEKKKKSAVANSSKFKALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLG
        G+SL +   +L +K  +  A  +  + +++ A  DS WYG +RP++LGP   + P YL GE  GDYG+D AGLS DP  F +    E++HARWAML +LG
Subjt:  GESLQR---QLEKKKKSAVANSSKFKALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLG

Query:  ALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILM
         L PE+L   G   F E +W++ G        LDYLG P   L  +Q ++ I  CQ +LM
Subjt:  ALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILM

P22686 Chlorophyll a-b binding protein of LHCII type I, chloroplastic8.0e-2941.94Show/hide
Query:  SLQRQLEKKKKSAVANSSKFKALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPE
        +L  ++E  KK+A    +K    A        WYG +R +WLGP   + P YLTGE PGDYG+D AGLS DP  F+KY   E++HARWA+L +LG L PE
Subjt:  SLQRQLEKKKKSAVANSSKFKALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPE

Query:  ILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILM
        +L  +    F EP+W++ G        LDYLG P   L  +Q ++     Q +LM
Subjt:  ILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILM

Q9C9K1 Chlorophyll a-b binding protein 7, chloroplastic2.9e-8767.51Show/hide
Query:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSIS-HRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSK
        MAL Q     SS+SSS +S +        P       R+  +++  RS CRASWQELAGVL+FSA+PFTAVKAIANS +G SL+R+LE+KKK AV NSS+
Subjt:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSIS-HRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSK

Query:  FKALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVG
        FK+ A+EAR DS WYG+ERPRW GP+PYDYP YLTGELPGDYGFDIAGL +D + F KYFNFEILHARWAMLA+LGAL+PE+ D+ G FHF EP+WWRVG
Subjt:  FKALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVG

Query:  YSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML
        YSKL+G+TL+YLGIPGLH+AGSQGVIVIAICQ +LM+
Subjt:  YSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML

Arabidopsis top hitse value%identityAlignment
AT1G76570.1 Chlorophyll A-B binding family protein2.0e-8867.51Show/hide
Query:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSIS-HRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSK
        MAL Q     SS+SSS +S +        P       R+  +++  RS CRASWQELAGVL+FSA+PFTAVKAIANS +G SL+R+LE+KKK AV NSS+
Subjt:  MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSIS-HRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSK

Query:  FKALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVG
        FK+ A+EAR DS WYG+ERPRW GP+PYDYP YLTGELPGDYGFDIAGL +D + F KYFNFEILHARWAMLA+LGAL+PE+ D+ G FHF EP+WWRVG
Subjt:  FKALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVG

Query:  YSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML
        YSKL+G+TL+YLGIPGLH+AGSQGVIVIAICQ +LM+
Subjt:  YSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILML

AT2G05070.1 photosystem II light harvesting complex gene 2.27.6e-2747.2Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        S WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILM
        LG P  +L  +Q ++ I   Q +LM
Subjt:  LGIPGLHLAGSQGVIVIAICQAILM

AT2G05100.1 photosystem II light harvesting complex gene 2.17.6e-2747.2Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        S WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILM
        LG P  +L  +Q ++ I   Q +LM
Subjt:  LGIPGLHLAGSQGVIVIAICQAILM

AT3G27690.1 photosystem II light harvesting complex gene 2.35.3e-2848Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        S WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILM
        LG P  +L  +Q ++ I  CQ +LM
Subjt:  LGIPGLHLAGSQGVIVIAICQAILM

AT5G54270.1 light-harvesting chlorophyll B-binding protein 34.5e-2745.53Show/hide
Query:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG
        WYG +R ++LGP     P YLTGE PGDYG+D AGLS DP AF K    E++H RWAML + G + PE+L  +    F EP+W++ G        LDYLG
Subjt:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG

Query:  IPGLHLAGSQGVIVIAICQAILM
         P  +L  +Q ++ +   Q ILM
Subjt:  IPGLHLAGSQGVIVIAICQAILM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTAATTCAGCCACACACTCCAGCTTCTTCAATTTCATCTTCATCCGCCTCATTCTACGGAACGTATCTTCAACAGCTCCGTCCGCTCACCACAACCCTTAATCT
TCGAAGCAACCACTCTATCTCTCATCGTTCCACTTGCAGAGCTTCCTGGCAGGAGCTTGCAGGTGTTCTGATCTTCTCTGCAGTTCCTTTCACGGCGGTTAAAGCCATTG
CCAATAGCCCGCTTGGAGAGTCGCTCCAGAGACAATTGGAAAAGAAGAAAAAATCTGCCGTAGCCAACTCTTCCAAGTTCAAGGCTCTTGCTGAGGAGGCTAGAAAAGAT
AGCTCGTGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAGTATCTGACAGGTGAACTGCCTGGTGATTATGGATTTGATATTGCAGG
TTTGAGTGAGGATCCTGTGGCTTTCCAGAAATACTTCAACTTTGAAATATTGCATGCTCGTTGGGCTATGTTAGCATCCCTAGGTGCTTTAGTTCCAGAGATCTTGGATA
TTTTTGGAGCGTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAAGGAGATACACTTGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGA
AGCCAAGGAGTGATCGTCATTGCAATTTGCCAAGCTATTTTGATGTTGCTCTCATCAAGATCTGCATCTGCAATTCTTCTTCCACATTCATGTCTCCTACTCCATGATCT
TCTCTACTCGATCTCCCATTTCAGCTCACTCCTCCGCTTCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTAATTCAGCCACACACTCCAGCTTCTTCAATTTCATCTTCATCCGCCTCATTCTACGGAACGTATCTTCAACAGCTCCGTCCGCTCACCACAACCCTTAATCT
TCGAAGCAACCACTCTATCTCTCATCGTTCCACTTGCAGAGCTTCCTGGCAGGAGCTTGCAGGTGTTCTGATCTTCTCTGCAGTTCCTTTCACGGCGGTTAAAGCCATTG
CCAATAGCCCGCTTGGAGAGTCGCTCCAGAGACAATTGGAAAAGAAGAAAAAATCTGCCGTAGCCAACTCTTCCAAGTTCAAGGCTCTTGCTGAGGAGGCTAGAAAAGAT
AGCTCGTGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAGTATCTGACAGGTGAACTGCCTGGTGATTATGGATTTGATATTGCAGG
TTTGAGTGAGGATCCTGTGGCTTTCCAGAAATACTTCAACTTTGAAATATTGCATGCTCGTTGGGCTATGTTAGCATCCCTAGGTGCTTTAGTTCCAGAGATCTTGGATA
TTTTTGGAGCGTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAAGGAGATACACTTGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGA
AGCCAAGGAGTGATCGTCATTGCAATTTGCCAAGCTATTTTGATGTTGCTCTCATCAAGATCTGCATCTGCAATTCTTCTTCCACATTCATGTCTCCTACTCCATGATCT
TCTCTACTCGATCTCCCATTTCAGCTCACTCCTCCGCTTCTGGTAA
Protein sequenceShow/hide protein sequence
MALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKFKALAEEARKD
SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAG
SQGVIVIAICQAILMLLSSRSASAILLPHSCLLLHDLLYSISHFSSLLRFW