; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0020623 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020623
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr12:24465120..24466748
RNA-Seq ExpressionPay0020623
SyntenyPay0020623
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037441.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.0e-29897.23Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPP FQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQF+RTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSIANRGAKDFLI KSRSDKNE DDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNV PLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

KAA0060505.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]9.2e-29295.2Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKR NT SRSREIQS ED PPFEVAKNIWEQISKPPKGGIVIKENPA+DEH S S+ S+E++P PNIMSVMVTNVDTSENRM ELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        +KVNMLMKVVEERDYEIAFLKNHIES DAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIA+SIKTQYGGPAQTFSLYSKPYTKRI NL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFV+TLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQG KPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKI NSVIKE MV 
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGD+KRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQ GKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNV PLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

KAA0061565.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]9.5e-28995.02Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNI EQISKPPK                   C+NEEVPQPNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIAS SVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRG KDFLIPKSRSDKNE DDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAR+KKIEL+IDEVAQTNHVAIEMTSNVPPLTQLDDQRK+LI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

TYK03695.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.9e-29797.42Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALS IGKRPNT S SREIQS EDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIES DAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFD Y+DLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNEL+DTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPF DSDVADMLEQLLENQLIQLP+CKRP+QA KVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIEL+IDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

TYK14887.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.8e-29997.6Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIES DAAESSHKHTVKNTDKGKAVMQESQPQN TSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

TrEMBL top hitse value%identityAlignment
A0A5A7T777 Ty3-gypsy retrotransposon protein2.4e-29897.23Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPP FQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQF+RTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSIANRGAKDFLI KSRSDKNE DDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNV PLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

A0A5A7V3R7 Ty3-gypsy retrotransposon protein4.5e-29295.2Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKR NT SRSREIQS ED PPFEVAKNIWEQISKPPKGGIVIKENPA+DEH S S+ S+E++P PNIMSVMVTNVDTSENRM ELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        +KVNMLMKVVEERDYEIAFLKNHIES DAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIA+SIKTQYGGPAQTFSLYSKPYTKRI NL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFV+TLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQG KPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKI NSVIKE MV 
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGD+KRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQ GKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNV PLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

A0A5A7V6U6 Ty3-gypsy retrotransposon protein4.6e-28995.02Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNI EQISKPPK                   C+NEEVPQPNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIAS SVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRG KDFLIPKSRSDKNE DDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAR+KKIEL+IDEVAQTNHVAIEMTSNVPPLTQLDDQRK+LI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

A0A5D3BX77 Retrotransposon gag protein9.3e-29897.42Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALS IGKRPNT S SREIQS EDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIES DAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFD Y+DLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNEL+DTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPF DSDVADMLEQLLENQLIQLP+CKRP+QA KVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIEL+IDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

A0A5D3CSH0 Ty3-gypsy retrotransposon protein3.8e-29997.6Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLMKVVEERDYEIAFLKNHIES DAAESSHKHTVKNTDKGKAVMQESQPQN TSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLMKVVEERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTCAAGGCAACACTTCCAAAGCTCTCAGTGACATCGGCAAACGGCCAAACACCCGTAGCCGCTCAAGGGAGATTCAGTCATCTGAAGATATGCCTCCTTTTGA
AGTTGCAAAGAATATTTGGGAGCAAATCTCTAAGCCACCAAAAGGTGGAATTGTAATCAAAGAGAATCCTGCGGTTGATGAACACAACTCGTTGTCTGAGTGCTCAAACG
AGGAGGTTCCACAGCCAAATATAATGTCAGTTATGGTAACTAACGTGGATACAAGTGAAAATAGAATGGCAGAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTG
GAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACATTGAAAGTTGTGATGCTGCTGAATCAAGTCATAAACATACTGTCAAGAATACTGACAAAGGGAAGGCAGT
TATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGGAGATGATTGCAAGCTCCATCAAAACGCAATATGGTGGACCTGCTC
AAACTTTCTCCTTGTACTCCAAACCATATACGAAGAGGATCGACAATCTCAGAATGCCGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCA
AAACAACATGTTGCTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTA
CATCGATCTGGAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACCGTTTCTATAGCACCCGACGTATCGTCAGCATGATGGAGTTGACAAACA
CAAGACAACAAAAGGGAGAACTAGTCATCGACTACATCAACCGATGGAGAGCTCTGAGTCTTGACTGTAAGGATCGACTCACCGAACTGTCTGCAGTGGAGATGTGCACC
CAAGGCATGCATTGGGGACTTCTTTATATTTTACAGGGAATAAAACCTCGCACGTTTGAAGAGTTGGCGACTCGTGCCCATGATATGGAATTGAGTATCGCCAATAGAGG
AGCAAAAGATTTCTTGATTCCAAAATCGAGGAGTGACAAGAATGAACTTGATGACACTAAAAAGATTGCAAATAGTGTCATAAAAGAGTCAATGGTTGTTCATGCAACTC
CTTTGAAATCTTTCTCTAAAAGAAAAGAAACAAAAATTGAAAGAAAGCATGATGGCGATGAAAAGCGACAGTCAACTCTTAAAGAAAGACAGGAAAAAGTTTATCCATTT
CCTGACTCTGATGTTGCAGACATGTTAGAGCAGTTGCTAGAGAACCAACTTATTCAACTGCCAGAATGCAAACGACCAGAACAAGCAGGAAAAGTAGATGATCCTAACTA
CTGCAAGTATCATCGGGTCATTAGTCACCCTGTTGAAAAGTGTTTCGTGTTGAAAGAGCTAATTCTAAAGTTGGCTCGTGAAAAGAAGATCGAGCTAGATATTGATGAAG
TAGCTCAGACGAATCATGTTGCGATCGAGATGACTTCAAATGTTCCGCCATTAACACAACTTGATGATCAAAGAAAAAGCTTGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTCAAGGCAACACTTCCAAAGCTCTCAGTGACATCGGCAAACGGCCAAACACCCGTAGCCGCTCAAGGGAGATTCAGTCATCTGAAGATATGCCTCCTTTTGA
AGTTGCAAAGAATATTTGGGAGCAAATCTCTAAGCCACCAAAAGGTGGAATTGTAATCAAAGAGAATCCTGCGGTTGATGAACACAACTCGTTGTCTGAGTGCTCAAACG
AGGAGGTTCCACAGCCAAATATAATGTCAGTTATGGTAACTAACGTGGATACAAGTGAAAATAGAATGGCAGAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTG
GAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACATTGAAAGTTGTGATGCTGCTGAATCAAGTCATAAACATACTGTCAAGAATACTGACAAAGGGAAGGCAGT
TATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGGAGATGATTGCAAGCTCCATCAAAACGCAATATGGTGGACCTGCTC
AAACTTTCTCCTTGTACTCCAAACCATATACGAAGAGGATCGACAATCTCAGAATGCCGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCA
AAACAACATGTTGCTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTA
CATCGATCTGGAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACCGTTTCTATAGCACCCGACGTATCGTCAGCATGATGGAGTTGACAAACA
CAAGACAACAAAAGGGAGAACTAGTCATCGACTACATCAACCGATGGAGAGCTCTGAGTCTTGACTGTAAGGATCGACTCACCGAACTGTCTGCAGTGGAGATGTGCACC
CAAGGCATGCATTGGGGACTTCTTTATATTTTACAGGGAATAAAACCTCGCACGTTTGAAGAGTTGGCGACTCGTGCCCATGATATGGAATTGAGTATCGCCAATAGAGG
AGCAAAAGATTTCTTGATTCCAAAATCGAGGAGTGACAAGAATGAACTTGATGACACTAAAAAGATTGCAAATAGTGTCATAAAAGAGTCAATGGTTGTTCATGCAACTC
CTTTGAAATCTTTCTCTAAAAGAAAAGAAACAAAAATTGAAAGAAAGCATGATGGCGATGAAAAGCGACAGTCAACTCTTAAAGAAAGACAGGAAAAAGTTTATCCATTT
CCTGACTCTGATGTTGCAGACATGTTAGAGCAGTTGCTAGAGAACCAACTTATTCAACTGCCAGAATGCAAACGACCAGAACAAGCAGGAAAAGTAGATGATCCTAACTA
CTGCAAGTATCATCGGGTCATTAGTCACCCTGTTGAAAAGTGTTTCGTGTTGAAAGAGCTAATTCTAAAGTTGGCTCGTGAAAAGAAGATCGAGCTAGATATTGATGAAG
TAGCTCAGACGAATCATGTTGCGATCGAGATGACTTCAAATGTTCCGCCATTAACACAACTTGATGATCAAAGAAAAAGCTTGATTTAA
Protein sequenceShow/hide protein sequence
MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELEKKVNMLMKVV
EERDYEIAFLKNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNP
KQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCT
QGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPF
PDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI