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Pay0020627 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020627
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionMediator of RNA polymerase II transcription subunit 13, putative
Genome locationchr12:25007761..25008446
RNA-Seq ExpressionPay0020627
SyntenyPay0020627
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652596.1 hypothetical protein Csa_014373 [Cucumis sativus]4.5e-5484.56Show/hide
Query:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
        MKKKPDLHQLHD DRHLEILKAVAQAWH+HTGTSKPASEFDAHRRNSRP PSRFK+EAIRSRT++VS+RRWDFAQSLWDSYEIVTVSKKL          
Subjt:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG

Query:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
            ESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
Subjt:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY

XP_008438871.1 PREDICTED: uncharacterized protein LOC103483829 [Cucumis melo]3.8e-69100Show/hide
Query:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
        MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
Subjt:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG

Query:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
        FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
Subjt:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY

XP_011651756.1 uncharacterized protein LOC105434938 [Cucumis sativus]4.4e-6594.85Show/hide
Query:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
        MKKKPDLHQLHD DRHLEILKAVAQAWH+HTGTSKPASEFDAHRRNSRP PSRFK+EAIRSRT++VS+RRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
Subjt:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG

Query:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
        FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
Subjt:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY

XP_023001654.1 uncharacterized protein LOC111495727 [Cucurbita maxima]2.7e-4681.75Show/hide
Query:  LHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFREAESGGG
        + D D HLEILKAVAQAW +HTGTSKPASEFDAHRRN R  PSRFKLEAIRSR++    RRWDF QSLWDSYEIV VSKKLEAGLVLDGDGFREA+ GGG
Subjt:  LHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFREAESGGG

Query:  RSQRKRRESCNSLRNLFNRASSRRFN
        R+QRK+RESCNSLRNLFNR +SRRFN
Subjt:  RSQRKRRESCNSLRNLFNRASSRRFN

XP_038894267.1 uncharacterized protein LOC120082919 [Benincasa hispida]5.3e-5586.03Show/hide
Query:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
        MKKKP+L    DH RHLEILKAVAQAWH+HTG+SKPASEFDAHRRNSRPTPSRFKLEAIR+R +SVS+RRWDF QSLWDSYEIVTVSKKLEAGLVLD DG
Subjt:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG

Query:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
        FRE + GGGRSQRK+RESCNSLRNLF+RASSRRFNY
Subjt:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY

TrEMBL top hitse value%identityAlignment
A0A0A0LTM3 Uncharacterized protein2.1e-6594.85Show/hide
Query:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
        MKKKPDLHQLHD DRHLEILKAVAQAWH+HTGTSKPASEFDAHRRNSRP PSRFK+EAIRSRT++VS+RRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
Subjt:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG

Query:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
        FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
Subjt:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY

A0A1S3AX17 uncharacterized protein LOC1034838291.8e-69100Show/hide
Query:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
        MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
Subjt:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG

Query:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
        FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
Subjt:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY

A0A5A7UNW1 Uncharacterized protein1.8e-69100Show/hide
Query:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
        MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
Subjt:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG

Query:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
        FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
Subjt:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFNY

A0A6J1E7J5 uncharacterized protein LOC1114313502.2e-4678.52Show/hide
Query:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
        MK KP    + D D HLEILKAVAQAW +HTGTSKPASEFDAHRRN R  PSRFKLEAIRSR++    RRWDF QSLWDSYEIV VSKKLE GLVLDGDG
Subjt:  MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG

Query:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFN
        FREA+ GGGR+QRK+RESCNSLRNLFNR +SRRFN
Subjt:  FREAESGGGRSQRKRRESCNSLRNLFNRASSRRFN

A0A6J1KNC1 uncharacterized protein LOC1114957271.3e-4681.75Show/hide
Query:  LHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFREAESGGG
        + D D HLEILKAVAQAW +HTGTSKPASEFDAHRRN R  PSRFKLEAIRSR++    RRWDF QSLWDSYEIV VSKKLEAGLVLDGDGFREA+ GGG
Subjt:  LHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFREAESGGG

Query:  RSQRKRRESCNSLRNLFNRASSRRFN
        R+QRK+RESCNSLRNLFNR +SRRFN
Subjt:  RSQRKRRESCNSLRNLFNRASSRRFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24700.1 unknown protein2.9e-1943.06Show/hide
Query:  MKKKPDLHQLHDHD-----RHLEILKAVAQAWHNHTGTSK-PASEFDAHRRNS--RPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEA
        M+KK +    ++ +     + LE++KA AQAW +H+ TSK    EFDA R+++  +   SRFK EA+ S  +  S   W+F QSLWD YEI++VSKKLE 
Subjt:  MKKKPDLHQLHDHD-----RHLEILKAVAQAWHNHTGTSK-PASEFDAHRRNS--RPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEA

Query:  GLVLDGDGFREAESGGGRSQRKR--RESCNSLRNLFNRASSRRF
         L L+   F  +++ G +  +K+  R+S NSLR+LF R+SS+RF
Subjt:  GLVLDGDGFREAESGGGRSQRKR--RESCNSLRNLFNRASSRRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAAACCAGACCTTCATCAACTCCATGACCACGATCGTCATCTCGAAATCCTCAAGGCCGTCGCTCAGGCATGGCACAACCACACCGGCACTTCAAAGCCTGC
TAGTGAATTCGACGCCCATCGCCGGAATTCCAGACCCACGCCGTCTAGGTTCAAGCTTGAGGCTATTCGGAGCCGGACTAATTCCGTCAGCAATCGGAGATGGGACTTCG
CACAGTCGCTGTGGGATTCGTATGAGATCGTGACGGTTTCGAAAAAGCTAGAGGCGGGTCTGGTGCTCGACGGGGATGGGTTCCGGGAAGCTGAGAGCGGGGGTGGGCGG
AGTCAGCGGAAAAGGCGAGAGAGTTGTAATAGTTTGAGGAATTTGTTTAATAGGGCTTCTTCGAGGAGATTCAATTATTAG
mRNA sequenceShow/hide mRNA sequence
GAAGAAAGTAGAGAACAAAAATCCAAATGTAAGGTCCACAGTGTTCAACTGTAAAAGTACCAAAAATCAAAACCCATCTCTCTCGGACGAAACCCCCCAAATTTTGAGGT
TGTGATTGAACCTCATCATAAACAATGGCCCCGCCCCCAGTTTCAATTCCTTAATCCACACACACACACACATACACACACACACACACATTATGAAGAAGAAACCAGAC
CTTCATCAACTCCATGACCACGATCGTCATCTCGAAATCCTCAAGGCCGTCGCTCAGGCATGGCACAACCACACCGGCACTTCAAAGCCTGCTAGTGAATTCGACGCCCA
TCGCCGGAATTCCAGACCCACGCCGTCTAGGTTCAAGCTTGAGGCTATTCGGAGCCGGACTAATTCCGTCAGCAATCGGAGATGGGACTTCGCACAGTCGCTGTGGGATT
CGTATGAGATCGTGACGGTTTCGAAAAAGCTAGAGGCGGGTCTGGTGCTCGACGGGGATGGGTTCCGGGAAGCTGAGAGCGGGGGTGGGCGGAGTCAGCGGAAAAGGCGA
GAGAGTTGTAATAGTTTGAGGAATTTGTTTAATAGGGCTTCTTCGAGGAGATTCAATTATTAGGGATTTCAAGTTCGAATTCGAACTGATGAATGGAATGTGAGACTTTG
TTGATTATCCAAATTTTGAAACCCAG
Protein sequenceShow/hide protein sequence
MKKKPDLHQLHDHDRHLEILKAVAQAWHNHTGTSKPASEFDAHRRNSRPTPSRFKLEAIRSRTNSVSNRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFREAESGGGR
SQRKRRESCNSLRNLFNRASSRRFNY