; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0020646 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020646
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionStructure-specific endonuclease subunit SLX1 homolog
Genome locationchr12:1358432..1360584
RNA-Seq ExpressionPay0020646
SyntenyPay0020646
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0051569 - regulation of histone H3-K4 methylation (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016593 - Cdc73/Paf1 complex (cellular component)
GO:0033557 - Slx1-Slx4 complex (cellular component)
GO:0000993 - RNA polymerase II complex binding (molecular function)
GO:0008821 - crossover junction endodeoxyribonuclease activity (molecular function)
GO:0017108 - 5'-flap endonuclease activity (molecular function)
InterPro domainsIPR000305 - GIY-YIG endonuclease
IPR027520 - Structure-specific endonuclease subunit Slx1
IPR035901 - GIY-YIG endonuclease superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060004.1 Structure-specific endonuclease subunit SLX1 [Cucumis melo var. makuwa]1.0e-22699.23Show/hide
Query:  MAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP
        MAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP
Subjt:  MAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP

Query:  NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDWEYDRESEEIC
        NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI+ELPCYSEGDQGVLENEDDWEYDRESEEIC
Subjt:  NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDWEYDRESEEIC

Query:  SFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDD
        SF+VYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDD
Subjt:  SFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDD

Query:  GEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
        GEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRC+NGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
Subjt:  GEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL

KGN66284.2 hypothetical protein Csa_023148 [Cucumis sativus]2.7e-18794.19Show/hide
Query:  IGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNY
        I  +VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW GLNITVNY
Subjt:  IGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNY

Query:  FSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETN
        FSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQ +LENE DWEY+RE EEIC FRVYGSMKEVSNEVPQKLMDYQTGTDGRPP VLRGCDKELETN
Subjt:  FSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETN

Query:  EQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTV
        EQVPPSSCTPSY+DVGMSYDLCACDEGLENDEREAASCGQSC VAGTSRTEI+IDD EENQ EGS MNLQEQPGR+NLTSGIASEISKVSR NNG VPTV
Subjt:  EQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTV

Query:  EYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
        EYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
Subjt:  EYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL

XP_004153269.1 structure-specific endonuclease subunit SLX1 homolog [Cucumis sativus]8.0e-21693.77Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKEKPEICKT      DEEKE DDEEEERGN VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW GLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQ +LENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
         DWEY+RE EEIC FRVYGSMKEVSNEVPQKLMDYQTGTDGRPP VLRGCDKELETNEQVPPSSCTPSY+DVGMSYDLCACDEGLENDEREAASCGQSC 
Subjt:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        VAGTSRTEI+IDD EENQ EGS MNLQEQPGR+NLTSGIASEISKVSR NNG VPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

XP_008457313.1 PREDICTED: uncharacterized protein LOC103497035 [Cucumis melo]5.0e-23499.25Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI+ELPCYSEGDQGVLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
        DDWEYDRESEEICSF+VYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
Subjt:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRC+NGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

XP_038894793.1 structure-specific endonuclease subunit SLX1 [Benincasa hispida]5.0e-19484.29Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKE+PEI KTMA   +++E ++D+EEEE  N VNGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWC LNITVNYFSTK+MKNAAGCPSLP+HMKVQVSPINELPCYSEGDQ VLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
        DDWEY+RE EEICSFRVYGSMKEVSNEVPQKLMD+Q  TDGRP   L GCDKE E NEQVPPSSC PSY+D GMSYDL  CDE LE DERE ASC  SC 
Subjt:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        V   SRTEIIIDDG+E+Q EG+GMNL++Q  RKNL+SGIASEISKVSRCN  L P VEYEVIDVSTPSPDCRT+SHR KR+VTSG+SE+IDLTKSPTFIQ
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A0A0M0Y6 Structure-specific endonuclease subunit SLX1 homolog3.9e-21693.77Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKEKPEICKT      DEEKE DDEEEERGN VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW GLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQ +LENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
         DWEY+RE EEIC FRVYGSMKEVSNEVPQKLMDYQTGTDGRPP VLRGCDKELETNEQVPPSSCTPSY+DVGMSYDLCACDEGLENDEREAASCGQSC 
Subjt:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        VAGTSRTEI+IDD EENQ EGS MNLQEQPGR+NLTSGIASEISKVSR NNG VPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

A0A1S3C574 Structure-specific endonuclease subunit SLX1 homolog2.4e-23499.25Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI+ELPCYSEGDQGVLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
        DDWEYDRESEEICSF+VYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
Subjt:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRC+NGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

A0A5D3BBR0 Structure-specific endonuclease subunit SLX1 homolog4.8e-22799.23Show/hide
Query:  MAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP
        MAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP
Subjt:  MAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP

Query:  NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDWEYDRESEEIC
        NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI+ELPCYSEGDQGVLENEDDWEYDRESEEIC
Subjt:  NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDWEYDRESEEIC

Query:  SFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDD
        SF+VYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDD
Subjt:  SFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDD

Query:  GEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
        GEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRC+NGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
Subjt:  GEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL

A0A6J1HZQ2 Structure-specific endonuclease subunit SLX1 homolog1.6e-16678.53Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MR+RKEKPEI KTMA     EEK++DDE+EERGN  NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMV CIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSG+ANK+KLAYTMLTLPAWC LNITVNYFSTK+M NAAGCPSLP HM+VQ+SPI+ELPCYSEGD+ VLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
        +DWEY++E EE+CS +V+G M EV NE+PQ LMDY TGTDGRP   LRG D+EL+ NEQVP SSCTPSY+DVG+SYDL  C      DE+E A C Q CT
Subjt:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRV
        V G   TEIIIDDGEENQ EGSGM LQ+QPGRK   SGIA+EISKVS    GL P VEYEVIDVSTPSP CRTSSH+FKRR+
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRV

A0A6J1I681 Structure-specific endonuclease subunit SLX1 homolog1.6e-16678.53Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MR+RKEKPEI KTMA     EEK++DDE+EERGN  NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMV CIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSG+ANK+KLAYTMLTLPAWC LNITVNYFSTK+M NAAGCPSLP HM+VQ+SPI+ELPCYSEGD+ VLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
        +DWEY++E EE+CS +V+G M EV NE+PQ LMDY TGTDGRP   LRG D+EL+ NEQVP SSCTPSY+DVG+SYDL  C      DE+E A C Q CT
Subjt:  DDWEYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRV
        V G   TEIIIDDGEENQ EGSGM LQ+QPGRK   SGIA+EISKVS    GL P VEYEVIDVSTPSP CRTSSH+FKRR+
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRV

SwissProt top hitse value%identityAlignment
Q0IH86 Structure-specific endonuclease subunit slx12.5e-2637.91Show/hide
Query:  VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVAN
        V GF+  YLL    P++KG  YIGFTVNP+RRI+QHN G+ + GAW+T  + PW+MVL ++GFP +++AL+FEWAWQHP+ S  +       K  S    
Subjt:  VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVAN

Query:  KVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELP
         + +   ML +  W  L +T+ +   ++ +        P HM +    +   P
Subjt:  KVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELP

Q32PI0 Structure-specific endonuclease subunit SLX12.6e-2841.61Show/hide
Query:  GVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVA
        G   FF  YLL    PR +G  Y+GFTVNP RR++QHN G  + GAWRT  + PWEMVL ++GFP+ V+AL+FEWAWQHP  S  +       +  +  A
Subjt:  GVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVA

Query:  NKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP
          +++   ML  P W  L +T+ +    F ++   CP  P HM +   P
Subjt:  NKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP

Q5PQP5 Structure-specific endonuclease subunit SLX13.1e-2940.74Show/hide
Query:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR +G  Y+GFTVNP RR+RQHN G  + GAWRT  + PW+MVL ++GFP+ V+AL+FEWAWQHP  S  +       +S +     ++
Subjt:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP------INELPCYSEGD
        +   ML +P W  L +TV +    F      CP+ P HM +   P      + + P  SE D
Subjt:  LAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP------INELPCYSEGD

Q8BX32 Structure-specific endonuclease subunit SLX11.1e-2941.36Show/hide
Query:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR +G  Y+GFTVNP RR+RQHN G  + GAWRT  + PW+MVL I+GFP+ V+AL+FEWAWQHP  S  +       +S +  A  ++
Subjt:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP------INELPCYSEGD
        +   ML +P W  L +T+ +    F      CP+ P HM +   P      + + P  SE D
Subjt:  LAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP------INELPCYSEGD

Q9BQ83 Structure-specific endonuclease subunit SLX15.5e-2639.31Show/hide
Query:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR++G  Y+GFTVN  RR++QHN G  + GAWRT  + PWEMVL ++GFP++V+AL+FEWAWQHP+ S  +       +  +  A  ++
Subjt:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP
        +   ML  P W  L +T+ +      ++   C   P H+ +   P
Subjt:  LAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP

Arabidopsis top hitse value%identityAlignment
AT2G30350.1 Excinuclease ABC, C subunit, N-terminal1.6e-3334.43Show/hide
Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDW
        LQFEWAWQHP ES+AVR AAA FKS SGVA+K+KL YTML LPAW  LN+TVNYFS+K+  +    PSLP HMKVQV  + +L  +++ D      +++ 
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDW

Query:  EYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDK--------ELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASC
            E ++        ++ +  N       D        P  V    D+         L+  E V       S++ VG         E + ND   + +C
Subjt:  EYDRESEEICSFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDK--------ELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASC

Query:  GQSCTVAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKS
                    EI+ D+        +    +E   R+N  +   +E              V+ EVID+ TPSP CR  S   +RRV    SE IDLT S
Subjt:  GQSCTVAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKS

Query:  PTFIQ
        P FI+
Subjt:  PTFIQ

AT2G30350.2 Excinuclease ABC, C subunit, N-terminal4.4e-7142.78Show/hide
Query:  EEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFK
        E+   G    GFF+CYLL S  PR KG TYIGFTVNP+RRIRQHNGEI  GAWRTK+KRPWEMVLCIYGFPTNVSALQFEWAWQHP ES+AVR AAA FK
Subjt:  EEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFK

Query:  SLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDWEYDRESEEICSFRVYGSMKEVSNE
        S SGVA+K+KL YTML LPAW  LN+TVNYFS+K+  +    PSLP HMKVQV  + +L  +++ D      +++     E ++        ++ +  N 
Subjt:  SLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDWEYDRESEEICSFRVYGSMKEVSNE

Query:  VPQKLMDYQTGTDGRPPPVLRGCDK--------ELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDDGEENQF
              D        P  V    D+         L+  E V       S++ VG         E + ND   + +C            EI+ D+      
Subjt:  VPQKLMDYQTGTDGRPPPVLRGCDK--------ELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDDGEENQF

Query:  EGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
          +    +E   R+N  +   +E              V+ EVID+ TPSP CR  S   +RRV    SE IDLT SP FI+
Subjt:  EGSGMNLQEQPGRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

AT5G43210.1 Excinuclease ABC, C subunit, N-terminal4.0e-0841.67Show/hide
Query:  FSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQ
        +S YL+ S     K  TY+G T +  RR++QHNGEIR GA  +   RPW     I GF     A  FE  W+
Subjt:  FSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGAGGAAAGAGAAACCGGAAATCTGTAAAACCATGGCTGCAGTAGTACAGGATGAGGAGAAGGAAGATGATGATGAAGAAGAAGAGAGAGGAAACGGTGTGAA
TGGCTTCTTTTCATGCTATCTCTTGGCCTCTGCTTGCCCTCGTTTCAAAGGCCATACCTATATCGGATTCACAGTGAATCCGAAGCGCAGAATCAGACAACACAATGGTG
AAATTAGATGCGGTGCTTGGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTGTGCATTTATGGCTTCCCTACTAATGTATCTGCTCTTCAGTTTGAATGGGCGTGG
CAGCATCCTAATGAGTCATTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCTAACAAAGTTAAACTTGCATATACAATGCTCACACTTCCTGC
TTGGTGTGGTTTAAATATAACTGTAAACTACTTCTCAACAAAGTTCATGAAGAATGCGGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGTTTCTCCCATCA
ATGAGCTTCCATGCTATTCCGAAGGAGATCAAGGTGTGCTTGAAAATGAAGATGACTGGGAGTATGATAGAGAAAGTGAAGAAATTTGTAGTTTTCGAGTATATGGATCG
ATGAAAGAAGTTTCAAATGAAGTTCCTCAAAAGTTAATGGATTATCAGACAGGTACAGATGGAAGACCTCCTCCCGTATTGCGTGGATGTGATAAGGAGCTTGAGACCAA
TGAACAAGTGCCACCTTCTTCGTGTACTCCATCTTATGTTGATGTGGGTATGTCTTATGACTTGTGTGCATGTGATGAAGGACTCGAGAATGATGAAAGAGAGGCAGCTT
CGTGTGGTCAGTCTTGCACTGTAGCAGGTACATCTAGGACTGAAATTATCATTGATGACGGAGAGGAAAACCAATTCGAAGGGAGTGGTATGAACTTGCAGGAGCAACCA
GGTAGGAAGAATTTAACATCAGGAATAGCTTCTGAAATCAGCAAAGTTTCAAGGTGTAATAATGGCCTGGTTCCAACTGTTGAGTATGAGGTTATCGATGTGTCTACCCC
GTCTCCCGACTGCCGAACAAGTTCGCATAGATTCAAGAGAAGAGTTACTTCCGGTAAGTCTGAGATGATTGACTTGACTAAATCTCCTACATTTATCCAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGAGGAAAGAGAAACCGGAAATCTGTAAAACCATGGCTGCAGTAGTACAGGATGAGGAGAAGGAAGATGATGATGAAGAAGAAGAGAGAGGAAACGGTGTGAA
TGGCTTCTTTTCATGCTATCTCTTGGCCTCTGCTTGCCCTCGTTTCAAAGGCCATACCTATATCGGATTCACAGTGAATCCGAAGCGCAGAATCAGACAACACAATGGTG
AAATTAGATGCGGTGCTTGGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTGTGCATTTATGGCTTCCCTACTAATGTATCTGCTCTTCAGTTTGAATGGGCGTGG
CAGCATCCTAATGAGTCATTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCTAACAAAGTTAAACTTGCATATACAATGCTCACACTTCCTGC
TTGGTGTGGTTTAAATATAACTGTAAACTACTTCTCAACAAAGTTCATGAAGAATGCGGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGTTTCTCCCATCA
ATGAGCTTCCATGCTATTCCGAAGGAGATCAAGGTGTGCTTGAAAATGAAGATGACTGGGAGTATGATAGAGAAAGTGAAGAAATTTGTAGTTTTCGAGTATATGGATCG
ATGAAAGAAGTTTCAAATGAAGTTCCTCAAAAGTTAATGGATTATCAGACAGGTACAGATGGAAGACCTCCTCCCGTATTGCGTGGATGTGATAAGGAGCTTGAGACCAA
TGAACAAGTGCCACCTTCTTCGTGTACTCCATCTTATGTTGATGTGGGTATGTCTTATGACTTGTGTGCATGTGATGAAGGACTCGAGAATGATGAAAGAGAGGCAGCTT
CGTGTGGTCAGTCTTGCACTGTAGCAGGTACATCTAGGACTGAAATTATCATTGATGACGGAGAGGAAAACCAATTCGAAGGGAGTGGTATGAACTTGCAGGAGCAACCA
GGTAGGAAGAATTTAACATCAGGAATAGCTTCTGAAATCAGCAAAGTTTCAAGGTGTAATAATGGCCTGGTTCCAACTGTTGAGTATGAGGTTATCGATGTGTCTACCCC
GTCTCCCGACTGCCGAACAAGTTCGCATAGATTCAAGAGAAGAGTTACTTCCGGTAAGTCTGAGATGATTGACTTGACTAAATCTCCTACATTTATCCAATTGTAA
Protein sequenceShow/hide protein sequence
MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAW
QHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDWEYDRESEEICSFRVYGS
MKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDDGEENQFEGSGMNLQEQP
GRKNLTSGIASEISKVSRCNNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL