| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO73521.1 gag-pol polyprotein [Glycine max] | 2.7e-291 | 48.11 | Show/hide |
Query: ISSLKLKLREVQNENDQILKSVKMLNSGTKNLDSILKSGHNGSHRYGLGF----------------------VASASRAMHN-------------LALSG
IS LK ++ + ++ + + KS+KMLN G+ LD +L G N ++ GLGF S R+ H+ G
Subjt: ISSLKLKLREVQNENDQILKSVKMLNSGTKNLDSILKSGHNGSHRYGLGF----------------------VASASRAMHN-------------LALSG
Query: ELNLLKDVRLPLHPF--------RPQMM---------------------------------------------HCVTGHVTFGDGTKGKIIAKGNIDKNN
+ +K LHP R +MM C T +VTFGDG+KGKII G + +
Subjt: ELNLLKDVRLPLHPF--------RPQMM---------------------------------------------HCVTGHVTFGDGTKGKIIAKGNIDKNN
Query: LPRLNDL-------------------------------------------------------------------------------GHVSMKGLEKVIKN
LP LN + GH+ ++G++K+I
Subjt: LPRLNDL-------------------------------------------------------------------------------GHVSMKGLEKVIKN
Query: EAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQRE
A+ I +L + CG+CQI KQ + +H+ L+ T+RVLELLHMDLMGPMQ ESL GKRY VVVDD+SR+TWV F + K++T E+ K L L+LQRE
Subjt: EAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQRE
Query: KGKKITRIRSDHGKDFDN---------EGF------------NSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWK
K I RIRSDHG++F+N EG N ERKNRTLQE RVM+HAK LP WAEA+NT C+IHNRVT+R G TLYE+WK
Subjt: KGKKITRIRSDHGKDFDN---------EGF------------NSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWK
Query: EREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PNMSEA----------
R+P++K+FH+FGS CYILAD+E R+K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL A K+ +E+ T N+++A
Subjt: EREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PNMSEA----------
Query: -STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRR-------------
S T +++ D S + + K IIG + G+ T+ +E +++V + C+ S IEP V AL DE+W+NAMQEEL QF+R
Subjt: -STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRR-------------
Query: ----------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKH
N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKLYQ+DVKS FLN YLNEEVYV QPKGF D HP H
Subjt: ----------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKH
Query: VYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKN
VY+L K+LYGLKQAPRAWYERLT +L + Y +G I KTLF+ + ++ L++AQIYVD I+FGG +++ +F+ MQSEFEMS+VGEL+YFLGLQ+KQ
Subjt: VYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKN
Query: DGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTS
D IF+SQ +YAK++VKKFG+E A +KRTPA H+KL++D G V LYRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL VKRILKYV+GTS
Subjt: DGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTS
Query: DFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAI
D+G+MY + + P LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+QL+WMK ML EY +QD MTLY DNMSAI
Subjt: DFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAI
Query: DISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
+ISKNP+QHSRTKHIDIRHH+I +LV+DKVI L H+ + Q DIFTK LDAN FE LR LG+CL
Subjt: DISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
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| AAO73523.1 gag-pol polyprotein [Glycine max] | 1.5e-289 | 57.73 | Show/hide |
Query: GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDT
GH+ ++G++K++ A+ I +L + CG+CQI KQ + +H+ L+ T+RVLELLHMDLMGPMQ ESL GKRY VVVDD+SR+TWV F + K+ T
Subjt: GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDT
Query: VEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVT
E+ K L L+LQREK I RIRSDHG++F+N F F ERKNRTLQE RVM+HAK LP WAEA+NT C+IHNRVT
Subjt: VEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVT
Query: IRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PN
+R G TLYE+WK R+P++K+FH+FGS CYILAD+E R+K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL A K+ +E+ T N
Subjt: IRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PN
Query: MSEA-----------STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR
+++A S T +++ D S + + K IIG + G+ T+ +E +++V + C+ S IEP V AL DE+W+NAMQEEL QF+
Subjt: MSEA-----------STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR
Query: R-----------------------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYV
R N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKLYQ+DVKS FLN YLNEEVYV
Subjt: R-----------------------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYV
Query: AQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG
QPKGF D HP HVY+L K+LYGLKQAPRAWYERLT +L + Y +G I KTLF+ + ++ L++AQIYVD I+FGG +++ +F+ MQSEFEMS+VG
Subjt: AQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG
Query: ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHL
EL+YFLGLQ+KQ D IF+SQ +YAK++VKKFG+E A +KRTPA H+KL++D G V K YRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL
Subjt: ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHL
Query: EVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFD
VKRILKYV+GTSD+G+MY + ++ LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+QL+WMK ML EY +
Subjt: EVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFD
Query: QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
QD MTLY DNMSAI+ISKNP+QHSRTKHIDIRHH+I +LV+DKVI L H+ + Q DIFTK LDAN FE LR LG+C+
Subjt: QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
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| AAO73527.1 gag-pol polyprotein [Glycine max] | 2.7e-291 | 58.07 | Show/hide |
Query: GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDT
GH+ ++G++K+I A+ I +L + CG+CQI KQ + +H+ L+ T+RVLELLHMDLMGPMQ ESL GKRY VVVDD+SR+TWV F + K++T
Subjt: GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDT
Query: VEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVT
E+ K L L+LQREK I RIRSDHG++F+N F F ERKNRTLQE RVM+HAK LP WAEA+NT C+IHNRVT
Subjt: VEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVT
Query: IRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PN
+R G TLYE+WK R+P++K+FH+FGS CYILAD+E R+K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL A K+ +E+ T N
Subjt: IRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PN
Query: MSEA-----------STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR
+++A S T +++ D S + + K IIG + G+ T+ +E +++V + C+ S IEP V AL DE+W+NAMQEEL QF+
Subjt: MSEA-----------STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR
Query: R-----------------------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYV
R N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKLYQ+DVKS FLN YLNEEVYV
Subjt: R-----------------------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYV
Query: AQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG
QPKGF D HP HVY+L K+LYGLKQAPRAWYERLT +L + Y +G I KTLF+ + ++ L++AQIYVD I+FGG +++ +F+ MQSEFEMS+VG
Subjt: AQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG
Query: ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHL
EL+YFLGLQ+KQ D IF+SQ +YAK++VKKFG+E A +KRTPA H+KL++D G V LYRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL
Subjt: ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHL
Query: EVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFD
VKRILKYV+GTSD+G+MY + + P LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+QL+WMK ML EY +
Subjt: EVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFD
Query: QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
QD MTLY DNMSAI+ISKNP+QHSRTKHIDIRHH+I +LV+DKVI L H+ + Q DIFTK LDAN FE LR LG+CL
Subjt: QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
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| AAO73529.1 gag-pol polyprotein [Glycine max] | 3.2e-292 | 58.18 | Show/hide |
Query: GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDT
GH+ ++G++K+I A+ I +L + CG+CQI KQ + +H+ L+ T+RVLELLHMDLMGPMQ ESL GKRY VVVDD+SR+TWV F + K+DT
Subjt: GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDT
Query: VEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVT
E+ K L L+LQREK I RIRSDHG++F+N F F ERKNRTLQE RVM+HAK LP WAEA+NT C+IHNRVT
Subjt: VEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVT
Query: IRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDETPNMS
+R G TLYE+WK R+P +K+FH+FGS CYILAD+E R+K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL A K+ +E+ T +
Subjt: IRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDETPNMS
Query: EASTTSTVE-VSKADNPSDDPGKSL--------------KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR
A T + E +D+ +D+P + K IIG + G+ T+ +E +++V + C+ S IEP V AL DE+W+NAMQEEL QF+
Subjt: EASTTSTVE-VSKADNPSDDPGKSL--------------KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR
Query: R-----------------------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYV
R N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKLYQ+DVKS FLN YLNEE YV
Subjt: R-----------------------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYV
Query: AQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG
QPKGFVD HP HVY+L K+LYGLKQAPRAWYERLT +L + Y +G I KTLF+ + ++ L++AQIYVD I+FGG +++ +F+ MQSEFEMS+VG
Subjt: AQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG
Query: ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHL
EL+YFLGLQ+KQ D IF+SQ KYAK++VKKFG+E A +KRTPA H+KL++D G V LYRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL
Subjt: ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHL
Query: EVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFD
VKRILKYV+GTSD+G+MY + + LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+QL+WMK ML EY +
Subjt: EVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFD
Query: QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
QD MTLY DNMSAI+ISKNP+QHSRTKHIDIRHH+I ELV+DKVI L+H+ + Q DIFTK LDA FE LR LG+CL
Subjt: QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
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| MCH79363.1 gag-pol polyprotein [Trifolium medium] | 6.1e-291 | 58.49 | Show/hide |
Query: LGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTD
LGH+ +KG++K I EAI + L + CG+CQI KQT+ +H L+ T+RVLELLHMDLMGPMQ ES+ GKRY V+VDD+SR+TW+ F K K+D
Subjt: LGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTD
Query: TVEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGF---------------------NSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRV
+ E+ KNLCL+LQREK I RIRSDHGK+F+N F N ERKNRT+QE RVM+HAK+LP WAEA+NT C+IHNRV
Subjt: TVEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGF---------------------NSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRV
Query: TIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSA--------IKQMND
T+R+G + TLYELWK R+P +K+FHVFGS CYILAD+E R+K D +SE+GIFLGYS NSRAY+V N+R++ +ME+INVV++D SA + +D
Subjt: TIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSA--------IKQMND
Query: --EEDETPNMSEASTTSTVEVSKADNPSDDPGKS-LKNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR---
EE E + EAST+ V+K PS K+ K+ IIG + G+ T+R + + + C+ S IEP V AL DE+W+ AMQEEL QF+
Subjt: --EEDETPNMSEASTTSTVEVSKADNPSDDPGKS-LKNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR---
Query: --------------------RNNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQP
RN +DE G VT+NKARLVAQGY+QVEG++FDETFAPVARLE+I+LL+G++CI +FKLYQ+DVKS FLN YL+EEVYV QP
Subjt: --------------------RNNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQP
Query: KGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELS
KGF+D +P HVYKL K+LYGLKQAPRAWYERLT++L + Y +G KTLF+ K+ L++AQIYVD I+FGG ++V +F+ MQSEFEMS+VGEL+
Subjt: KGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELS
Query: YFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVV
YFLGLQ+KQ D IF+SQ KYAK++VKKFG+E A KRTPAA H+KLTRD G V +Y+S++GSLLYLTASRPDI + VG+CAR+QA+P +SHL V
Subjt: YFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVV
Query: KRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFDQDT
KRILKY++GTSD+G++Y LVGYCDADW GSADDRKSTS GCFFLGNNLISW SKKQNCVSLSTAEAEYIA GS C+QL+WMK ML +Y QD
Subjt: KRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFDQDT
Query: MTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
MTL+ DN+SAI+ISKNPIQHSRTKHIDIRHHFI +LVE+ V+ L+H+S++ Q DIFTK LDAN +E LR LG+CL
Subjt: MTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A392LWM0 Gag-pol polyprotein (Fragment) | 2.9e-291 | 58.49 | Show/hide |
Query: LGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTD
LGH+ +KG++K I EAI + L + CG+CQI KQT+ +H L+ T+RVLELLHMDLMGPMQ ES+ GKRY V+VDD+SR+TW+ F K K+D
Subjt: LGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTD
Query: TVEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGF---------------------NSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRV
+ E+ KNLCL+LQREK I RIRSDHGK+F+N F N ERKNRT+QE RVM+HAK+LP WAEA+NT C+IHNRV
Subjt: TVEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGF---------------------NSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRV
Query: TIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSA--------IKQMND
T+R+G + TLYELWK R+P +K+FHVFGS CYILAD+E R+K D +SE+GIFLGYS NSRAY+V N+R++ +ME+INVV++D SA + +D
Subjt: TIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSA--------IKQMND
Query: --EEDETPNMSEASTTSTVEVSKADNPSDDPGKS-LKNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR---
EE E + EAST+ V+K PS K+ K+ IIG + G+ T+R + + + C+ S IEP V AL DE+W+ AMQEEL QF+
Subjt: --EEDETPNMSEASTTSTVEVSKADNPSDDPGKS-LKNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR---
Query: --------------------RNNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQP
RN +DE G VT+NKARLVAQGY+QVEG++FDETFAPVARLE+I+LL+G++CI +FKLYQ+DVKS FLN YL+EEVYV QP
Subjt: --------------------RNNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQP
Query: KGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELS
KGF+D +P HVYKL K+LYGLKQAPRAWYERLT++L + Y +G KTLF+ K+ L++AQIYVD I+FGG ++V +F+ MQSEFEMS+VGEL+
Subjt: KGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELS
Query: YFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVV
YFLGLQ+KQ D IF+SQ KYAK++VKKFG+E A KRTPAA H+KLTRD G V +Y+S++GSLLYLTASRPDI + VG+CAR+QA+P +SHL V
Subjt: YFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVV
Query: KRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFDQDT
KRILKY++GTSD+G++Y LVGYCDADW GSADDRKSTS GCFFLGNNLISW SKKQNCVSLSTAEAEYIA GS C+QL+WMK ML +Y QD
Subjt: KRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFDQDT
Query: MTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
MTL+ DN+SAI+ISKNPIQHSRTKHIDIRHHFI +LVE+ V+ L+H+S++ Q DIFTK LDAN +E LR LG+CL
Subjt: MTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
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| Q84VH6 Gag-pol polyprotein | 1.6e-292 | 58.18 | Show/hide |
Query: GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDT
GH+ ++G++K+I A+ I +L + CG+CQI KQ + +H+ L+ T+RVLELLHMDLMGPMQ ESL GKRY VVVDD+SR+TWV F + K+DT
Subjt: GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDT
Query: VEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVT
E+ K L L+LQREK I RIRSDHG++F+N F F ERKNRTLQE RVM+HAK LP WAEA+NT C+IHNRVT
Subjt: VEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVT
Query: IRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDETPNMS
+R G TLYE+WK R+P +K+FH+FGS CYILAD+E R+K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL A K+ +E+ T +
Subjt: IRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDETPNMS
Query: EASTTSTVE-VSKADNPSDDPGKSL--------------KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR
A T + E +D+ +D+P + K IIG + G+ T+ +E +++V + C+ S IEP V AL DE+W+NAMQEEL QF+
Subjt: EASTTSTVE-VSKADNPSDDPGKSL--------------KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR
Query: R-----------------------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYV
R N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKLYQ+DVKS FLN YLNEE YV
Subjt: R-----------------------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYV
Query: AQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG
QPKGFVD HP HVY+L K+LYGLKQAPRAWYERLT +L + Y +G I KTLF+ + ++ L++AQIYVD I+FGG +++ +F+ MQSEFEMS+VG
Subjt: AQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG
Query: ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHL
EL+YFLGLQ+KQ D IF+SQ KYAK++VKKFG+E A +KRTPA H+KL++D G V LYRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL
Subjt: ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHL
Query: EVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFD
VKRILKYV+GTSD+G+MY + + LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+QL+WMK ML EY +
Subjt: EVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFD
Query: QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
QD MTLY DNMSAI+ISKNP+QHSRTKHIDIRHH+I ELV+DKVI L+H+ + Q DIFTK LDA FE LR LG+CL
Subjt: QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
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| Q84VH8 Gag-pol polyprotein | 1.3e-291 | 58.07 | Show/hide |
Query: GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDT
GH+ ++G++K+I A+ I +L + CG+CQI KQ + +H+ L+ T+RVLELLHMDLMGPMQ ESL GKRY VVVDD+SR+TWV F + K++T
Subjt: GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDT
Query: VEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVT
E+ K L L+LQREK I RIRSDHG++F+N F F ERKNRTLQE RVM+HAK LP WAEA+NT C+IHNRVT
Subjt: VEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVT
Query: IRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PN
+R G TLYE+WK R+P++K+FH+FGS CYILAD+E R+K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL A K+ +E+ T N
Subjt: IRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PN
Query: MSEA-----------STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR
+++A S T +++ D S + + K IIG + G+ T+ +E +++V + C+ S IEP V AL DE+W+NAMQEEL QF+
Subjt: MSEA-----------STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR
Query: R-----------------------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYV
R N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKLYQ+DVKS FLN YLNEEVYV
Subjt: R-----------------------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYV
Query: AQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG
QPKGF D HP HVY+L K+LYGLKQAPRAWYERLT +L + Y +G I KTLF+ + ++ L++AQIYVD I+FGG +++ +F+ MQSEFEMS+VG
Subjt: AQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG
Query: ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHL
EL+YFLGLQ+KQ D IF+SQ +YAK++VKKFG+E A +KRTPA H+KL++D G V LYRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL
Subjt: ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHL
Query: EVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFD
VKRILKYV+GTSD+G+MY + + P LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+QL+WMK ML EY +
Subjt: EVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFD
Query: QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
QD MTLY DNMSAI+ISKNP+QHSRTKHIDIRHH+I +LV+DKVI L H+ + Q DIFTK LDAN FE LR LG+CL
Subjt: QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
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| Q84VI2 Gag-pol polyprotein | 7.3e-290 | 57.73 | Show/hide |
Query: GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDT
GH+ ++G++K++ A+ I +L + CG+CQI KQ + +H+ L+ T+RVLELLHMDLMGPMQ ESL GKRY VVVDD+SR+TWV F + K+ T
Subjt: GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDT
Query: VEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVT
E+ K L L+LQREK I RIRSDHG++F+N F F ERKNRTLQE RVM+HAK LP WAEA+NT C+IHNRVT
Subjt: VEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVT
Query: IRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PN
+R G TLYE+WK R+P++K+FH+FGS CYILAD+E R+K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL A K+ +E+ T N
Subjt: IRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PN
Query: MSEA-----------STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR
+++A S T +++ D S + + K IIG + G+ T+ +E +++V + C+ S IEP V AL DE+W+NAMQEEL QF+
Subjt: MSEA-----------STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR
Query: R-----------------------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYV
R N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKLYQ+DVKS FLN YLNEEVYV
Subjt: R-----------------------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYV
Query: AQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG
QPKGF D HP HVY+L K+LYGLKQAPRAWYERLT +L + Y +G I KTLF+ + ++ L++AQIYVD I+FGG +++ +F+ MQSEFEMS+VG
Subjt: AQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG
Query: ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHL
EL+YFLGLQ+KQ D IF+SQ +YAK++VKKFG+E A +KRTPA H+KL++D G V K YRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL
Subjt: ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHL
Query: EVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFD
VKRILKYV+GTSD+G+MY + ++ LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+QL+WMK ML EY +
Subjt: EVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFD
Query: QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
QD MTLY DNMSAI+ISKNP+QHSRTKHIDIRHH+I +LV+DKVI L H+ + Q DIFTK LDAN FE LR LG+C+
Subjt: QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
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| Q84VI4 Gag-pol polyprotein | 1.3e-291 | 48.11 | Show/hide |
Query: ISSLKLKLREVQNENDQILKSVKMLNSGTKNLDSILKSGHNGSHRYGLGF----------------------VASASRAMHN-------------LALSG
IS LK ++ + ++ + + KS+KMLN G+ LD +L G N ++ GLGF S R+ H+ G
Subjt: ISSLKLKLREVQNENDQILKSVKMLNSGTKNLDSILKSGHNGSHRYGLGF----------------------VASASRAMHN-------------LALSG
Query: ELNLLKDVRLPLHPF--------RPQMM---------------------------------------------HCVTGHVTFGDGTKGKIIAKGNIDKNN
+ +K LHP R +MM C T +VTFGDG+KGKII G + +
Subjt: ELNLLKDVRLPLHPF--------RPQMM---------------------------------------------HCVTGHVTFGDGTKGKIIAKGNIDKNN
Query: LPRLNDL-------------------------------------------------------------------------------GHVSMKGLEKVIKN
LP LN + GH+ ++G++K+I
Subjt: LPRLNDL-------------------------------------------------------------------------------GHVSMKGLEKVIKN
Query: EAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQRE
A+ I +L + CG+CQI KQ + +H+ L+ T+RVLELLHMDLMGPMQ ESL GKRY VVVDD+SR+TWV F + K++T E+ K L L+LQRE
Subjt: EAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQRE
Query: KGKKITRIRSDHGKDFDN---------EGF------------NSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWK
K I RIRSDHG++F+N EG N ERKNRTLQE RVM+HAK LP WAEA+NT C+IHNRVT+R G TLYE+WK
Subjt: KGKKITRIRSDHGKDFDN---------EGF------------NSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWK
Query: EREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PNMSEA----------
R+P++K+FH+FGS CYILAD+E R+K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL A K+ +E+ T N+++A
Subjt: EREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PNMSEA----------
Query: -STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRR-------------
S T +++ D S + + K IIG + G+ T+ +E +++V + C+ S IEP V AL DE+W+NAMQEEL QF+R
Subjt: -STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRR-------------
Query: ----------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKH
N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKLYQ+DVKS FLN YLNEEVYV QPKGF D HP H
Subjt: ----------NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKH
Query: VYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKN
VY+L K+LYGLKQAPRAWYERLT +L + Y +G I KTLF+ + ++ L++AQIYVD I+FGG +++ +F+ MQSEFEMS+VGEL+YFLGLQ+KQ
Subjt: VYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKN
Query: DGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTS
D IF+SQ +YAK++VKKFG+E A +KRTPA H+KL++D G V LYRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL VKRILKYV+GTS
Subjt: DGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTS
Query: DFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAI
D+G+MY + + P LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+QL+WMK ML EY +QD MTLY DNMSAI
Subjt: DFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAI
Query: DISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
+ISKNP+QHSRTKHIDIRHH+I +LV+DKVI L H+ + Q DIFTK LDAN FE LR LG+CL
Subjt: DISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.4e-93 | 27.27 | Show/hide |
Query: KNNLPRLND-LGHVSMKGL-----EKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKE-CYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVD
KNN ++ GH+S L + + ++++L L+L C C KQ R K LK+ + R L ++H D+ GP+ +L K Y ++ VD
Subjt: KNNLPRLND-LGHVSMKGL-----EKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKE-CYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVD
Query: DYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKDF-DNE--------------------GFNSFSERKNRTLQEMTRVMIHAKNLPLC
++ Y K K+D + ++ K + K+ + D+G+++ NE N SER RT+ E R M+ L
Subjt: DYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKDF-DNE--------------------GFNSFSERKNRTLQEMTRVMIHAKNLPLC
Query: FWAEAVNTTCHIHNRVTIR--TGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVIND
FW EAV T ++ NR+ R + T YE+W ++P +K+ VFG+T Y+ K + K+D +S + IF+GY N +K+++ +E + +VV+++
Subjt: FWAEAVNTTCHIHNRVTIR--TGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVIND
Query: LDSA-----------IKQMNDEED-------------ETPNMS-EASTTSTVEVSKADNPSDDPGKS--------------------LKNSIIGGSSAGM
+ +K + E+ E PN S E ++ SK + P S LK+S
Subjt: LDSA-----------IKQMNDEED-------------ETPNMS-EASTTSTVEVSKADNPSDDPGKS--------------------LKNSIIGGSSAGM
Query: QTKRKEKIDY---------------------------------------------MKMVVDLCYNS--------TIEPSTVHSALKDEY-----------
++K++++ D+ +K + YN + T+ + + + +
Subjt: QTKRKEKIDY---------------------------------------------MKMVVDLCYNS--------TIEPSTVHSALKDEY-----------
Query: WLNAMQEELLQFRRNNT-----------------------DEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKS
W A+ EL + NNT +E G + KARLVA+G+ Q I+++ETFAPVAR+ + + +L + K++Q+DVK+
Subjt: WLNAMQEELLQFRRNNT-----------------------DEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKS
Query: VFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKS--DQLLVAQIYVDVIIFGGFPQDLVNN
FLN L EE+Y+ P+G S + +V KLNK++YGLKQA R W+E LK E+ + + ++I K ++ + +YVD ++ +NN
Subjt: VFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKS--DQLLVAQIYVDVIIFGGFPQDLVNN
Query: FINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVK---LTRDTDGAEVGHKLYRSIVGSLLY-LTASRPDI
F + +F M+ + E+ +F+G++I+ + D I++SQ Y K ++ KF +E TP + + L D D + RS++G L+Y + +RPD+
Subjt: FINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVK---LTRDTDGAEVGHKLYRSIVGSLLY-LTASRPDI
Query: AYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTT--PTLVGYCDADWTGSADDRKSTSEGCFFLGN-NLISWLSKKQNCVSLSTAEAEYI
V I +R+ + + +KR+L+Y+ GT D +++ ++GY D+DW GS DRKST+ F + + NLI W +K+QN V+ S+ EAEY+
Subjt: AYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTT--PTLVGYCDADWTGSADDRKSTSEGCFFLGN-NLISWLSKKQNCVSLSTAEAEYI
Query: ATGSGCTQLIWMKNMLHEYRFD-QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLG
A + +W+K +L ++ + +Y DN I I+ NP H R KHIDI++HF E V++ VI L++I + Q DIFTKPL A F LR LG
Subjt: ATGSGCTQLIWMKNMLHEYRFD-QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLG
Query: V
+
Subjt: V
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-119 | 31.08 | Show/hide |
Query: LGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTD
+GH+S KGL+ + K I V C C KQ R + ++ E N +L+L++ D+ GPM+ ES+ G +Y + +DD SR WV K K
Subjt: LGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTD
Query: TVEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGF---------------------NSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRV
++ + ++RE G+K+ R+RSD+G ++ + F N +ER NRT+ E R M+ LP FW EAV T C++ NR
Subjt: TVEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGF---------------------NSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRV
Query: TIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET---
+W +E + + VFG + KE R K D +S IF+GY Y++++ + V+ + +VV +S ++ D ++
Subjt: TIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET---
Query: --------PNMSEASTTSTVEVSKADNPSDDPGKSLKNS---IIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDE--------------
P+ S T++ + + PG+ ++ G T+ +E+ ++ S PST + + D+
Subjt: --------PNMSEASTTSTVEVSKADNPSDDPGKSLKNS---IIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDE--------------
Query: --YWLNAMQEELLQFRRNNT----------------------DEAGC-VTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQID
+ AMQEE+ ++N T + C + + KARLV +G+ Q +GI+FDE F+PV ++ +I+ +L ++ ++ Q+D
Subjt: --YWLNAMQEELLQFRRNNT----------------------DEAGC-VTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQID
Query: VKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSD-QLLVAQIYVDVIIFGGFPQDLV
VK+ FL+ L EE+Y+ QP+GF + V KLNKSLYGLKQAPR WY + ++K + Y + ++ R S+ ++ +YVD ++ G + L+
Subjt: VKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSD-QLLVAQIYVDVIIFGGFPQDLV
Query: NNFINIMQSEFEMSMVGELSYFLGLQIKQKNDG--IFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHK------LYRSIVGSLLY-L
+ F+M +G LG++I ++ +++SQEKY + ++++F ++ A+ TP A H+KL++ V K Y S VGSL+Y +
Subjt: NNFINIMQSEFEMSMVGELSYFLGLQIKQKNDG--IFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHK------LYRSIVGSLLY-L
Query: TASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAE
+RPDIA+ VG+ +RF +P H E VK IL+Y+ GT+ + F G+ P L GY DAD G D+RKS++ F ISW SK Q CV+LST E
Subjt: TASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAE
Query: AEYIATGSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRA
AEYIA ++IW+K L E Q +Y D+ SAID+SKN + H+RTKHID+R+H+I E+V+D+ +K+ IS+N D+ TK + N FE +
Subjt: AEYIATGSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRA
Query: DLGV
+G+
Subjt: DLGV
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 1.1e-35 | 37.67 | Show/hide |
Query: IYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKL-YRS
+YVD I+ G L+N I + S F M +G + YFLG+QIK G+F+SQ KYA+ ++ G+ + TP +KL A+ +RS
Subjt: IYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKL-YRS
Query: IVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQN
IVG+L YLT +RPDI+Y V I + +P ++ +++KR+L+YV GT G+ + + +CD+DW G R+ST+ C FLG N+ISW +K+Q
Subjt: IVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQN
Query: CVSLSTAEAEYIATGSGCTQLIW
VS S+ E EY A +L W
Subjt: CVSLSTAEAEYIATGSGCTQLIW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.7e-84 | 33.94 | Show/hide |
Query: NDLDSAIKQMNDEEDETPNMSEASTTSTVEVSKADNPSD---DPGKSLKNSIIGGSSAGMQTK---RKEKIDYMK------MVVDLCYNSTIEPSTVHSA
N+ S + Q ++ + S + TTS S + P P L + + A + T + K +K + V L S EP T A
Subjt: NDLDSAIKQMNDEEDETPNMSEASTTSTVEVSKADNPSD---DPGKSLKNSIIGGSSAGMQTK---RKEKIDYMK------MVVDLCYNSTIEPSTVHSA
Query: LKDEYWLNAMQEELLQFRRNNT------------------------DEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLY
LKDE W NAM E+ N+T + G + + KARLVA+GYNQ G+++ ETF+PV + +I+++LG++ + + +
Subjt: LKDEYWLNAMQEELLQFRRNNT------------------------DEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLY
Query: QIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQD
Q+DV + FL L ++VY++QP GF+D + P +V KL K+LYGLKQAPRAWY L YL + +LF+ ++ ++ +YVD I+ G
Subjt: QIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQD
Query: LVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKL-----TRDTDGAEVGHKLYRSIVGSLLYLTA
L++N ++ + F + EL YFLG++ K+ G+ +SQ +Y D++ + + A+ TP A KL T+ TD E YR IVGSL YL
Subjt: LVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKL-----TRDTDGAEVGHKLYRSIVGSLLYLTA
Query: SRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAE
+RPDI+Y V ++F P HL+ +KRIL+Y+ GT + G+ G T +L Y DADW G DD ST+ +LG++ ISW SKKQ V S+ EAE
Subjt: SRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAE
Query: YIATGSGCTQLIWMKNMLHE--YRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRA
Y + + +++ W+ ++L E R + + +Y DN+ A + NP+ HSR KHI I +HFI V+ +++ H+S++ Q D TKPL +F+ +
Subjt: YIATGSGCTQLIWMKNMLHE--YRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRA
Query: DLGV
+GV
Subjt: DLGV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.4e-90 | 26.74 | Show/hide |
Query: LGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHK---SLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKG
LGH S+ L VI N + L +L+ ++ C DC I+K +HK S +++ LE ++ D+ S+ RY ++ VD ++RYTW+ K
Subjt: LGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHK---SLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKG
Query: KT---DTVEICKNLCLKLQREKGKKITRIRSDHGKDF-------------------DNEGFNSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHI
K+ DT I K+L ++ +I + SD+G +F N SERK+R + EM ++ ++P +W A + ++
Subjt: KT---DTVEICKNLCLKLQREKGKKITRIRSDHGKDF-------------------DNEGFNSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHI
Query: HNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVIND-----------LDS
NR+ + ++ + PN + VFG CY R K + +S+Q F+GYS AY + + + + +V ++ + +
Subjt: HNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVIND-----------LDS
Query: AIKQMNDEEDETPNMSEASTT---------------------------STVEVSKADNPSDD--------------------------------------
+ +Q +D P+ + TT T +VS ++ PS
Subjt: AIKQMNDEEDETPNMSEASTT---------------------------STVEVSKADNPSDD--------------------------------------
Query: -----------------------------PGKSLKNSIIGGSSA---------------------------GMQTKRKEKI----DYMKMVVDLCYNSTI
P S+ SS+ M T+ K+ I L NS
Subjt: -----------------------------PGKSLKNSIIGGSSA---------------------------GMQTKRKEKI----DYMKMVVDLCYNSTI
Query: EPSTVHSALKDEYWLNAMQEELLQFRRNNT------------------------DEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGIS
EP T A+KD+ W AM E+ N+T + G + + KARLVA+GYNQ G+++ ETF+PV + +I+++LG++
Subjt: EPSTVHSALKDEYWLNAMQEELLQFRRNNT------------------------DEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGIS
Query: CIQKFKLYQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVI
+ + + Q+DV + FL L +EVY++QP GFVD + P +V +L K++YGLKQAPRAWY L YL + +LF+ ++ ++ +YVD I
Subjt: CIQKFKLYQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVI
Query: IFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLY
+ G L+ + ++ + F + +L YFLG++ K+ G+ +SQ +Y D++ + + A+ TP A KLT + YR IVGSL Y
Subjt: IFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLY
Query: LTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTA
L +RPD++Y V +++ P H +KR+L+Y+ GT D G+ G T +L Y DADW G DD ST+ +LG++ ISW SKKQ V S+
Subjt: LTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTA
Query: EAEYIATGSGCTQLIWMKNMLHEYRFD-QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYL
EAEY + + ++L W+ ++L E +Y DN+ A + NP+ HSR KHI + +HFI V+ +++ H+S++ Q D TKPL +F+
Subjt: EAEYIATGSGCTQLIWMKNMLHEYRFD-QDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYL
Query: RADLGV
+GV
Subjt: RADLGV
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 4.5e-74 | 35.11 | Show/hide |
Query: EKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRRNNTDEA-----------------------GCVTKNKARLVAQGYNQVEGIEFDET
EK+ + +C EPST + A + W AM +E+ +T E G + + KARLVA+GY Q EGI+F ET
Subjt: EKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRRNNTDEA-----------------------GCVTKNKARLVAQGYNQVEGIEFDET
Query: FAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQPKGFV----DSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVK
F+PV +L +++L+L IS I F L+Q+D+ + FLN L+EE+Y+ P G+ DS P V L KS+YGLKQA R W+ + +V L G + +
Subjt: FAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQPKGFV----DSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVK
Query: TLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTR
T F+ + L +YVD II V+ + ++S F++ +G L YFLGL+I + GI I Q KYA D++ + GL + P V +
Subjt: TLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTR
Query: DTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFF
+ G V K YR ++G L+YL +R DI++ V ++F P ++H + V +IL Y+ GT G+ Y L + DA + D R+ST+ C F
Subjt: DTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFF
Query: LGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFDQDTMTLYY-DNMSAIDISKNPIQHSRTKHIDIRHHFIHE
LG +LISW SKKQ VS S+AEAEY A +++W+ E + TL + DN +AI I+ N + H RTKHI+ H + E
Subjt: LGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFDQDTMTLYY-DNMSAIDISKNPIQHSRTKHIDIRHHFIHE
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 7.5e-37 | 37.67 | Show/hide |
Query: IYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKL-YRS
+YVD I+ G L+N I + S F M +G + YFLG+QIK G+F+SQ KYA+ ++ G+ + TP +KL A+ +RS
Subjt: IYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKL-YRS
Query: IVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQN
IVG+L YLT +RPDI+Y V I + +P ++ +++KR+L+YV GT G+ + + +CD+DW G R+ST+ C FLG N+ISW +K+Q
Subjt: IVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQN
Query: CVSLSTAEAEYIATGSGCTQLIW
VS S+ E EY A +L W
Subjt: CVSLSTAEAEYIATGSGCTQLIW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 1.3e-09 | 35.2 | Show/hide |
Query: MQTKRKEKIDYMKMVVDLCYNSTI--EPSTVHSALKDEYWLNAMQEELLQFRRNNT-----------------------DEAGCVTKNKARLVAQGYNQV
M T+ K I+ + L +TI EP +V ALKD W AMQEEL RN T G + + KARLVA+G++Q
Subjt: MQTKRKEKIDYMKMVVDLCYNSTI--EPSTVHSALKDEYWLNAMQEELLQFRRNNT-----------------------DEAGCVTKNKARLVAQGYNQV
Query: EGIEFDETFAPVARLEAIQLLLGIS
EGI F ET++PV R I+ +L ++
Subjt: EGIEFDETFAPVARLEAIQLLLGIS
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