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Pay0020731 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020731
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPre-mRNA-splicing factor CWC25-like protein
Genome locationchr01:4851020..4858108
RNA-Seq ExpressionPay0020731
SyntenyPay0020731
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005684 - U2-type spliceosomal complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034965.1 pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa]5.0e-3093.59Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK
        MGEPICMTLVVA GNKILQKKGTVIFFFTFFRKHERLN LYELGL+VGKASN DGFKSLETL SSTIAATATEPSSSK
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK
KAA0037864.1 pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa]8.5e-3093.59Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK
        MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHE LN LYELGL+VGKASN DGFKSLETL SSTIAATATEPSSSK
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK
TYK21842.1 pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa]5.0e-3093.59Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK
        MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLN LYELGL+VGKASN DGFKSLETL SSTIA TATEPSSSK
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK
XP_008462005.1 PREDICTED: uncharacterized protein LOC103500480 isoform X1 [Cucumis melo]6.7e-5197.32Show/hide
Query:  SAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI
        S +VQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI
Subjt:  SAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI

Query:  AATATEPSSSKI
        AATATEPSSSK+
Subjt:  AATATEPSSSKI
XP_016902821.1 PREDICTED: uncharacterized protein LOC103500480 isoform X2 [Cucumis melo]6.7e-5197.32Show/hide
Query:  SAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI
        S +VQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI
Subjt:  SAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI

Query:  AATATEPSSSKI
        AATATEPSSSK+
Subjt:  AATATEPSSSKI
TrEMBL top hitse value%identityAlignment
A0A1S3CFU5 uncharacterized protein LOC103500480 isoform X13.3e-5197.32Show/hide
Query:  SAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI
        S +VQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI
Subjt:  SAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI

Query:  AATATEPSSSKI
        AATATEPSSSK+
Subjt:  AATATEPSSSKI
A0A1S4E3L4 uncharacterized protein LOC103500480 isoform X23.3e-5197.32Show/hide
Query:  SAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI
        S +VQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI
Subjt:  SAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTI

Query:  AATATEPSSSKI
        AATATEPSSSK+
Subjt:  AATATEPSSSKI
A0A5A7T0H4 Pre-mRNA-splicing factor CWC25-like protein2.4e-3093.59Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK
        MGEPICMTLVVA GNKILQKKGTVIFFFTFFRKHERLN LYELGL+VGKASN DGFKSLETL SSTIAATATEPSSSK
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK
A0A5D3CF18 Pre-mRNA-splicing factor CWC25-like protein4.1e-3093.59Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK
        MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHE LN LYELGL+VGKASN DGFKSLETL SSTIAATATEPSSSK
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK
A0A5D3DE30 Pre-mRNA-splicing factor CWC25-like protein2.4e-3093.59Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK
        MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLN LYELGL+VGKASN DGFKSLETL SSTIA TATEPSSSK
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK
SwissProt top hitse value%identityAlignment
F4JLM5 Isoleucine--tRNA ligase, cytoplasmic3.8e-0475.86Show/hide
Query:  KIVNRIKKLRKKAALEPTDTVEVYFRSQD
        +IVNRI+KLRKK+ LEPTD VEVYF+S D
Subjt:  KIVNRIKKLRKKAALEPTDTVEVYFRSQD
Arabidopsis top hitse value%identityAlignment
AT4G10320.1 tRNA synthetase class I (I, L, M and V) family protein2.7e-0575.86Show/hide
Query:  KIVNRIKKLRKKAALEPTDTVEVYFRSQD
        +IVNRI+KLRKK+ LEPTD VEVYF+S D
Subjt:  KIVNRIKKLRKKAALEPTDTVEVYFRSQD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAATGACACAGACTCTGCATTTGGCTTCTGCAAAAGTACAAAAGAAAAGAAGAAGTCGAAGGGATAAAATTTTGTCGTTGCCGCAAAAATTTTCGAGGCAATG
TTCTAACGTTTCAGGAGAAGATATGGGAGAACCCATTTGCATGACTTTGGTCGTTGCCGCCGGTAACAAAATACTTCAGAAGAAGGGAACCGTCATTTTCTTTTTCACAT
TTTTTAGGAAGCATGAGAGATTGAATTTTCTTTATGAATTGGGTTTGAAAGTTGGGAAAGCTAGCAATTTCGATGGATTTAAAAGCCTTGAAACCCTACTTAGTTCAACT
ATTGCCGCGACTGCCACTGAACCATCTAGTTCCAAGATTGTTAATAGAATCAAGAAGTTAAGGAAGAAAGCTGCCCTTGAACCTACAGATACAGTAGAAGTGTATTTTCG
ATCACAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAAATGACACAGACTCTGCATTTGGCTTCTGCAAAAGTACAAAAGAAAAGAAGAAGTCGAAGGGATAAAATTTTGTCGTTGCCGCAAAAATTTTCGAGGCAATG
TTCTAACGTTTCAGGAGAAGATATGGGAGAACCCATTTGCATGACTTTGGTCGTTGCCGCCGGTAACAAAATACTTCAGAAGAAGGGAACCGTCATTTTCTTTTTCACAT
TTTTTAGGAAGCATGAGAGATTGAATTTTCTTTATGAATTGGGTTTGAAAGTTGGGAAAGCTAGCAATTTCGATGGATTTAAAAGCCTTGAAACCCTACTTAGTTCAACT
ATTGCCGCGACTGCCACTGAACCATCTAGTTCCAAGATTGTTAATAGAATCAAGAAGTTAAGGAAGAAAGCTGCCCTTGAACCTACAGATACAGTAGAAGTGTATTTTCG
ATCACAAGATTAG
Protein sequenceShow/hide protein sequence
MPQMTQTLHLASAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSST
IAATATEPSSSKIVNRIKKLRKKAALEPTDTVEVYFRSQD