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Pay0020757 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020757
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibonuclease H
Genome locationchr07:9923595..9924026
RNA-Seq ExpressionPay0020757
SyntenyPay0020757
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsIPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]4.5e-3861.54Show/hide
Query:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD
        M+D T GHEALSFMDGSSGYNQIRM L D++KTAFRTPKGIY Y                                       KSKKKCDHLKD+KLVLD
Subjt:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD

Query:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI
        RLRKY+LRMNPLKCAF VTSGKFL FI+RHRGIE+DH KID I
Subjt:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]4.5e-3861.54Show/hide
Query:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD
        M+D T GHEALSFMDGSSGYNQIRM L D++KTAFRTPKGIY Y                                       KSKKKCDHLKD+KLVLD
Subjt:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD

Query:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI
        RLRKY+LRMNPLKCAF VTSGKFL FI+RHRGIE+DH KID I
Subjt:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI

TYK02262.1 uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa]4.5e-3861.54Show/hide
Query:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD
        M+D T GHEALSFMDGSSGYNQIRM L D++KTAFRTPKGIY Y                                       KSKKKCDHLKD+KLVLD
Subjt:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD

Query:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI
        RLRKY+LRMNPLKCAF VTSGKFL FI+RHRGIE+DH KID I
Subjt:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI

TYK16275.1 uncharacterized protein E5676_scaffold21G00440 [Cucumis melo var. makuwa]4.5e-3861.54Show/hide
Query:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD
        M+D T GHEALSFMDGSSGYNQIRM L D++KTAFRTPKGIY Y                                       KSKKKCDHLKD+KLVLD
Subjt:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD

Query:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI
        RLRKY+LRMNPLKCAF VTSGKFL FI+RHRGIE+DH KID I
Subjt:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI

XP_016899857.1 PREDICTED: uncharacterized protein LOC107990690 [Cucumis melo]6.7e-5097.12Show/hide
Query:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYYKSKKKCDHLKDMKLVLDRLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFK
        MVDETV HEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYYKSKKK D LKDMKLVLDRLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFK
Subjt:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYYKSKKKCDHLKDMKLVLDRLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFK

Query:  IDVI
        IDVI
Subjt:  IDVI

TrEMBL top hitse value%identityAlignment
A0A1S4DV45 uncharacterized protein LOC1079906903.3e-5097.12Show/hide
Query:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYYKSKKKCDHLKDMKLVLDRLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFK
        MVDETV HEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYYKSKKK D LKDMKLVLDRLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFK
Subjt:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYYKSKKKCDHLKDMKLVLDRLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFK

Query:  IDVI
        IDVI
Subjt:  IDVI

A0A5A7TZU9 Ribonuclease H2.2e-3861.54Show/hide
Query:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD
        M+D T GHEALSFMDGSSGYNQIRM L D++KTAFRTPKGIY Y                                       KSKKKCDHLKD+KLVLD
Subjt:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD

Query:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI
        RLRKY+LRMNPLKCAF VTSGKFL FI+RHRGIE+DH KID I
Subjt:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI

A0A5D3BIH8 Uncharacterized protein2.2e-3861.54Show/hide
Query:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD
        M+D T GHEALSFMDGSSGYNQIRM L D++KTAFRTPKGIY Y                                       KSKKKCDHLKD+KLVLD
Subjt:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD

Query:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI
        RLRKY+LRMNPLKCAF VTSGKFL FI+RHRGIE+DH KID I
Subjt:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI

A0A5D3BTY1 Ribonuclease H2.2e-3861.54Show/hide
Query:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD
        M+D T GHEALSFMDGSSGYNQIRM L D++KTAFRTPKGIY Y                                       KSKKKCDHLKD+KLVLD
Subjt:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD

Query:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI
        RLRKY+LRMNPLKCAF VTSGKFL FI+RHRGIE+DH KID I
Subjt:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI

A0A5D3CXS1 Uncharacterized protein2.2e-3861.54Show/hide
Query:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD
        M+D T GHEALSFMDGSSGYNQIRM L D++KTAFRTPKGIY Y                                       KSKKKCDHLKD+KLVLD
Subjt:  MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYY---------------------------------------KSKKKCDHLKDMKLVLD

Query:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI
        RLRKY+LRMNPLKCAF VTSGKFL FI+RHRGIE+DH KID I
Subjt:  RLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGATGAAACTGTAGGGCATGAAGCTTTATCTTTCATGGATGGGTCATCAGGATATAATCAGATTCGAATGACTCTACATGATAAAGATAAAACAGCATTTCGAAC
TCCAAAAGGTATATACTATTATAAGTCCAAGAAAAAATGTGATCACCTGAAAGACATGAAGCTTGTCCTTGATCGCCTCAGAAAATATGAACTAAGAATGAACCCTCTTA
AGTGTGCATTCGACGTGACTTCAGGAAAGTTTCTGGAATTTATCTTGAGACATCGTGGAATCGAACTTGATCACTTTAAAATTGATGTTATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGATGAAACTGTAGGGCATGAAGCTTTATCTTTCATGGATGGGTCATCAGGATATAATCAGATTCGAATGACTCTACATGATAAAGATAAAACAGCATTTCGAAC
TCCAAAAGGTATATACTATTATAAGTCCAAGAAAAAATGTGATCACCTGAAAGACATGAAGCTTGTCCTTGATCGCCTCAGAAAATATGAACTAAGAATGAACCCTCTTA
AGTGTGCATTCGACGTGACTTCAGGAAAGTTTCTGGAATTTATCTTGAGACATCGTGGAATCGAACTTGATCACTTTAAAATTGATGTTATCTAG
Protein sequenceShow/hide protein sequence
MVDETVGHEALSFMDGSSGYNQIRMTLHDKDKTAFRTPKGIYYYKSKKKCDHLKDMKLVLDRLRKYELRMNPLKCAFDVTSGKFLEFILRHRGIELDHFKIDVI