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Pay0020868 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020868
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr12:21552374..21553381
RNA-Seq ExpressionPay0020868
SyntenyPay0020868
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583907.1 hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sororia]3.5e-9476.03Show/hide
Query:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPP-----VPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNY
        MGEKM PPPPPPP +SLHS FFSSLKQVEKRLKLDH SQRD L PP P     +PV+  +SSS EE  LSTPMYLH PQTNT+S+LQESS+PP EFLSN 
Subjt:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPP-----VPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNY

Query:  SHSPPSHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLE
             S  K  SN PNLID G NR +DDIQRL+QLLGL DS +E+ELGA+ GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++  NGGGE +RLE
Subjt:  SHSPPSHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLE

Query:  PLRLAYLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA
        PLRLAYLL+GKAVFASNG D CLEGLEFPSTVEDFLLNDPPA
Subjt:  PLRLAYLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA

KGN65550.1 hypothetical protein Csa_019856 [Cucumis sativus]2.1e-11591.34Show/hide
Query:  PPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKPVS
        P P PPCLSLHS+FFSSLKQVEKRLKLDHSSQRDVLHPPPP+PV+TN SSSTEED LSTPMYLHFPQTNTSSTLQESSQ PLEFLS+ S SPPSHPK  S
Subjt:  PPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKPVS

Query:  NPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLLGKA
        NPP  IDRGQNRD+DDIQRLIQLLGLEDSCDEKE GAK GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG EEDRLEPLRLAYLLLGKA
Subjt:  NPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLLGKA

Query:  VFASNGDDGCLEGLEFPSTVEDFLLNDPPAL
        VFASN DDGCLEGLEFPSTVEDFLLNDPPAL
Subjt:  VFASNGDDGCLEGLEFPSTVEDFLLNDPPAL

XP_004147438.2 uncharacterized protein LOC101217056 [Cucumis sativus]3.8e-11790.76Show/hide
Query:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
        MGEKM  P P PPCLSLHS+FFSSLKQVEKRLKLDHSSQRDVLHPPPP+PV+TN SSSTEED LSTPMYLHFPQTNTSSTLQESSQ PLEFLS+ S SPP
Subjt:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP

Query:  SHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
        SHPK  SNPP  IDRGQNRD+DDIQRLIQLLGLEDSCDEKE GAK GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG EEDRLEPLRLA
Subjt:  SHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA

Query:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL
        YLLLGKAVFASN DDGCLEGLEFPSTVEDFLLNDPPAL
Subjt:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL

XP_008444181.1 PREDICTED: uncharacterized protein LOC103487596 [Cucumis melo]2.7e-13498.74Show/hide
Query:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
        MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
Subjt:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP

Query:  SHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
        SHPK VSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELG KIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
Subjt:  SHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA

Query:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL
        YLLLGKAVFASNGDDGCL+GLEFPSTVEDFLLNDPPAL
Subjt:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL

XP_038895328.1 uncharacterized protein LOC120083579 [Benincasa hispida]6.6e-10985.41Show/hide
Query:  MQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPK
        MQPP PPPP +SLHS+FFSSLKQVEKRLKLDH SQRDVLHPPP  PV+TN+SSST ED LSTPMYLHFPQTNT S LQESS+PPLEFLSN S SPPSHPK
Subjt:  MQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPK

Query:  PVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLL
          SNP   IDRGQN  + DIQRLIQLLGL +SCDE ELGAK GCNGCEGCESGFYSKIVGLKGPKC+KEVERLNGWIEFFSNGGGEE+RLEPLRLAYLL 
Subjt:  PVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLL

Query:  GKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA
        GK+VFASNGDDGCLEG+EFPSTVEDFLLNDPPA
Subjt:  GKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA

TrEMBL top hitse value%identityAlignment
A0A0A0LUG6 Uncharacterized protein1.0e-11591.34Show/hide
Query:  PPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKPVS
        P P PPCLSLHS+FFSSLKQVEKRLKLDHSSQRDVLHPPPP+PV+TN SSSTEED LSTPMYLHFPQTNTSSTLQESSQ PLEFLS+ S SPPSHPK  S
Subjt:  PPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKPVS

Query:  NPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLLGKA
        NPP  IDRGQNRD+DDIQRLIQLLGLEDSCDEKE GAK GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG EEDRLEPLRLAYLLLGKA
Subjt:  NPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLLGKA

Query:  VFASNGDDGCLEGLEFPSTVEDFLLNDPPAL
        VFASN DDGCLEGLEFPSTVEDFLLNDPPAL
Subjt:  VFASNGDDGCLEGLEFPSTVEDFLLNDPPAL

A0A1S3B9V1 uncharacterized protein LOC1034875961.3e-13498.74Show/hide
Query:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
        MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
Subjt:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP

Query:  SHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
        SHPK VSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELG KIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
Subjt:  SHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA

Query:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL
        YLLLGKAVFASNGDDGCL+GLEFPSTVEDFLLNDPPAL
Subjt:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL

A0A5A7UHE6 Uncharacterized protein1.3e-13498.74Show/hide
Query:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
        MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
Subjt:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP

Query:  SHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
        SHPK VSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELG KIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
Subjt:  SHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA

Query:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL
        YLLLGKAVFASNGDDGCL+GLEFPSTVEDFLLNDPPAL
Subjt:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL

A0A6J1END4 uncharacterized protein LOC1114341552.2e-9475.72Show/hide
Query:  MGEKMQPPPPPP-PCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSN
        MGEKM PPPPPP P +SLHS FFSSLKQVEKRLKLD+ SQRD L PP     P +PV+ ++SSS EE  LSTPMYLH PQTNT+S+LQESS+PP EFLSN
Subjt:  MGEKMQPPPPPP-PCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSN

Query:  YSHSPPSHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRL
              S  K  SN PNLID GQNR +DDIQRL+QLLGL DS +E+ELGA+ GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI +F  GGGE +RL
Subjt:  YSHSPPSHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRL

Query:  EPLRLAYLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA
        EPLRLAYLL+GKAVFASNG D CLEGLEFPSTVEDFLLNDPPA
Subjt:  EPLRLAYLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA

A0A6J1KGL6 uncharacterized protein LOC1114955908.4e-9475.31Show/hide
Query:  MGEKM-QPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSN
        MGEKM  PPPPPPP +SLHS FFSSLKQVEKRLKLD+ SQRD L PP     P +PV+ ++SSS EE  LSTPMYLH  QTNT+S+LQESS+PP EFLSN
Subjt:  MGEKM-QPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSN

Query:  YSHSPPSHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRL
              S  K  SN PNLID GQNR +DDIQRL+QLLG  DS +EKELGA+ GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++F  GGGE +RL
Subjt:  YSHSPPSHPKPVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRL

Query:  EPLRLAYLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA
        EPLRLAYLL+GKAVFASNG D CLEGLEFPSTVEDFLLNDPPA
Subjt:  EPLRLAYLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAAAAATGCAGCCGCCACCGCCACCGCCACCGTGTTTATCTCTTCACTCCCATTTCTTTTCCTCTCTAAAGCAGGTCGAAAAGCGCCTCAAATTAGATCATTC
ATCGCAACGAGACGTTCTTCATCCACCACCTCCAGTGCCAGTACAAACCAATGCTTCTTCATCAACTGAAGAAGACTTACTGAGCACTCCCATGTACCTTCATTTCCCCC
AAACCAACACAAGCTCCACCTTACAAGAAAGCAGCCAACCGCCACTCGAATTCCTCTCAAATTACTCCCATTCTCCACCATCTCATCCGAAACCAGTATCGAATCCTCCA
AATCTCATCGATCGTGGCCAAAATCGAGATTTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTAGGAGCTAAGATTGG
CTGTAATGGCTGTGAGGGATGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTAGAGAGGCTAAATGGATGGATCGAGTTCT
TTAGTAATGGTGGTGGTGAAGAAGACAGATTAGAGCCTCTTAGATTAGCGTATTTGCTGTTGGGAAAAGCTGTTTTTGCTTCTAATGGCGATGATGGATGTTTGGAAGGA
TTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAAAAATGCAGCCGCCACCGCCACCGCCACCGTGTTTATCTCTTCACTCCCATTTCTTTTCCTCTCTAAAGCAGGTCGAAAAGCGCCTCAAATTAGATCATTC
ATCGCAACGAGACGTTCTTCATCCACCACCTCCAGTGCCAGTACAAACCAATGCTTCTTCATCAACTGAAGAAGACTTACTGAGCACTCCCATGTACCTTCATTTCCCCC
AAACCAACACAAGCTCCACCTTACAAGAAAGCAGCCAACCGCCACTCGAATTCCTCTCAAATTACTCCCATTCTCCACCATCTCATCCGAAACCAGTATCGAATCCTCCA
AATCTCATCGATCGTGGCCAAAATCGAGATTTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTAGGAGCTAAGATTGG
CTGTAATGGCTGTGAGGGATGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTAGAGAGGCTAAATGGATGGATCGAGTTCT
TTAGTAATGGTGGTGGTGAAGAAGACAGATTAGAGCCTCTTAGATTAGCGTATTTGCTGTTGGGAAAAGCTGTTTTTGCTTCTAATGGCGATGATGGATGTTTGGAAGGA
TTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATTATAGGTAATAATTCCGCTTCAGTTATCTCTTTTGTTTTGTACATACTTATTCTTTAT
TTCATAAGCATGAGCAGTTGAATTGAAGCTTTAATTTCCTTTCTGGGTCAATAATGGCCACGATTAGTTCTATTCTCAAACGAGTTTCAAGAGCTGTTTGTAGTGATTTC
TTTAAAATGGTTGGTTTATCTCTCTCTGGTCACAGGGTTTGTAGTGATATAATCCTG
Protein sequenceShow/hide protein sequence
MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKPVSNPP
NLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLLGKAVFASNGDDGCLEG
LEFPSTVEDFLLNDPPAL