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Pay0020875 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020875
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Genome locationchr02:21120852..21121675
RNA-Seq ExpressionPay0020875
SyntenyPay0020875
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036694.1 retrotransposon protein [Cucumis melo var. makuwa]2.9e-8475.48Show/hide
Query:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
        MVAMFLHVLAHDVK+RVIQREFVRS ETVSRHFN++LL VLRLY+ELIK+ VP+T+NC DQRWKCF+N LGALDGTYIK ++PA DRPTFR RKG+I TN
Subjt:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN

Query:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG
        VLG+C+MK DFVYVLAGWEGSAADS IL DAL++ N L         + + + YHLQEWRG  NAPT AKEYFNMKHS TRNVIE  FGV KGHWAILRG
Subjt:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG

Query:  KSYYPLQV
        KSYYPLQV
Subjt:  KSYYPLQV

KAA0044609.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-8371.49Show/hide
Query:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
        MVAMFLHVLAHDVK+RVIQREFVRS ETVSRHFN++LL VLRLY+ELIK+ VP+T+NC DQRWKCF+N LGALDGTYIK ++PA DRPTFR RKG+I TN
Subjt:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN

Query:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRL-LSKCWKFFC------------LIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESA
        VLG+C+ K DFVYVLAGWEGSAADS ILRDA++R N L + K + + C              + + YHLQEWRG  NAPT AKEYFNMKHS  RNVIE A
Subjt:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRL-LSKCWKFFC------------LIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESA

Query:  FGVPKGHWAILRGKSYYPLQV
        FGV KG WAILRGKSYYPLQV
Subjt:  FGVPKGHWAILRGKSYYPLQV

TYK27061.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-8371.49Show/hide
Query:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
        MVAMFLHVLAHDVK+RVIQREFVRS ETVSRHFN++LL VLRLY+ELIK+ VP+T+NC DQRWKCF+N LGALDGTYIK ++PA DRPTFR RKG+I TN
Subjt:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN

Query:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRL-LSKCWKFFC------------LIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESA
        VLG+C+ K DFVYVLAGWEGSAADS ILRDA++R N L + K + + C              + + YHLQEWRG  NAPT AKEYFNMKHS  RNVIE A
Subjt:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRL-LSKCWKFFC------------LIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESA

Query:  FGVPKGHWAILRGKSYYPLQV
        FGV KGHWAI RGKSYYPLQV
Subjt:  FGVPKGHWAILRGKSYYPLQV

TYK28527.1 retrotransposon protein [Cucumis melo var. makuwa]3.7e-11695.37Show/hide
Query:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
        MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFN+ILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
Subjt:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN

Query:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRL--------LSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPK
        VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRL        LSKCW FFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPK
Subjt:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRL--------LSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPK

Query:  GHWAILRGKSYYPLQV
        GHWAILRGKSYYPLQV
Subjt:  GHWAILRGKSYYPLQV

XP_008453694.1 PREDICTED: uncharacterized protein LOC103494342 [Cucumis melo]3.6e-119100Show/hide
Query:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
        MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
Subjt:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN

Query:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG
        VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG
Subjt:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG

Query:  KSYYPLQV
        KSYYPLQV
Subjt:  KSYYPLQV

TrEMBL top hitse value%identityAlignment
A0A1S3BWC4 uncharacterized protein LOC1034943421.7e-119100Show/hide
Query:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
        MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
Subjt:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN

Query:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG
        VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG
Subjt:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG

Query:  KSYYPLQV
        KSYYPLQV
Subjt:  KSYYPLQV

A0A5A7SZH3 Retrotransposon protein1.4e-8475.48Show/hide
Query:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
        MVAMFLHVLAHDVK+RVIQREFVRS ETVSRHFN++LL VLRLY+ELIK+ VP+T+NC DQRWKCF+N LGALDGTYIK ++PA DRPTFR RKG+I TN
Subjt:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN

Query:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG
        VLG+C+MK DFVYVLAGWEGSAADS IL DAL++ N L         + + + YHLQEWRG  NAPT AKEYFNMKHS TRNVIE  FGV KGHWAILRG
Subjt:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG

Query:  KSYYPLQV
        KSYYPLQV
Subjt:  KSYYPLQV

A0A5A7UX19 Retrotransposon protein1.7e-119100Show/hide
Query:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
        MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
Subjt:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN

Query:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG
        VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG
Subjt:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRG

Query:  KSYYPLQV
        KSYYPLQV
Subjt:  KSYYPLQV

A0A5D3DTQ4 Retrotransposon protein5.3e-8471.49Show/hide
Query:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
        MVAMFLHVLAHDVK+RVIQREFVRS ETVSRHFN++LL VLRLY+ELIK+ VP+T+NC DQRWKCF+N LGALDGTYIK ++PA DRPTFR RKG+I TN
Subjt:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN

Query:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRL-LSKCWKFFC------------LIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESA
        VLG+C+ K DFVYVLAGWEGSAADS ILRDA++R N L + K + + C              + + YHLQEWRG  NAPT AKEYFNMKHS  RNVIE A
Subjt:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRL-LSKCWKFFC------------LIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESA

Query:  FGVPKGHWAILRGKSYYPLQV
        FGV KGHWAI RGKSYYPLQV
Subjt:  FGVPKGHWAILRGKSYYPLQV

A0A5D3DXD5 Retrotransposon protein1.8e-11695.37Show/hide
Query:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
        MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFN+ILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
Subjt:  MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN

Query:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRL--------LSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPK
        VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRL        LSKCW FFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPK
Subjt:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRL--------LSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPK

Query:  GHWAILRGKSYYPLQV
        GHWAILRGKSYYPLQV
Subjt:  GHWAILRGKSYYPLQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein3.7e-1327.98Show/hide
Query:  VAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIK-----KLVPITNNC-TDQR-WKCFKNFLGALDGTYIKFDLPAVDRPTFRMRK
        VAMFL +  H+   R +   F R++ETV R F  +L     L  + I+     +L  I      DQR W  F  F+GA+DGT++   +    +  +  R 
Subjt:  VAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIK-----KLVPITNNC-TDQR-WKCFKNFLGALDGTYIKFDLPAVDRPTFRMRK

Query:  GKITTNVLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQS-------------------ESYHL-QEWRGPENAPTTAKEYFN
           + N++ IC++K  F Y+  G  GS  D+ +L+ A    +       + + L+ S                     YH+ Q + GP   P    E FN
Subjt:  GKITTNVLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQS-------------------ESYHL-QEWRGPENAPTTAKEYFN

Query:  MKHSFTRNVIESAFGVPK
          H+  R+VIE  F + K
Subjt:  MKHSFTRNVIESAFGVPK

AT5G28950.1 unknown protein1.1e-1451.35Show/hide
Query:  FKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTNVLGICNMKRDFVYVLAGWEGSAADSWILRDALARH-NRL
        FK+ +GA+D T+I   +     P+FR RKG I+ N+L  CN   +F+YVL+GWEGSA DS +L DAL R+ NRL
Subjt:  FKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTNVLGICNMKRDFVYVLAGWEGSAADSWILRDALARH-NRL

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.0e-1443.3Show/hide
Query:  FVYVLAGWEGSAADSWILRDALARH--------NRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILR
        F+YVL+GWEGSA DS +L DAL +         NRL      F    +   YHLQE+ G    P T  E FN++H   RNVIE  FG+ K  +AI +
Subjt:  FVYVLAGWEGSAADSWILRDALARH--------NRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILR

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.1e-2533.02Show/hide
Query:  VAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCT-DQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN
        +A+FL ++ H++++R +Q  F  S ET+SRHFN +L  V+ +  +  +   P +N+ T +     FK+ +G +D  +I   +   ++  FR   G +T N
Subjt:  VAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCT-DQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTN

Query:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTT-----AKEYFNMKHSFTRNVIESAFGVPKGHW
        VL   +    F YVLAGWEGSA+D  +L  AL R N+L     K++ ++ ++  +L  +  P +  +T     AKE FN +H      I   FG  K  +
Subjt:  VLGICNMKRDFVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTT-----AKEYFNMKHSFTRNVIESAFGVPKGHW

Query:  AILRGKSYYPLQ
         IL     YPLQ
Subjt:  AILRGKSYYPLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCGATGTTCTTGCACGTTCTTGCCCATGACGTGAAGAGTCGTGTAATTCAACGAGAATTTGTACGGTCGGAAGAGACAGTATCGCGACATTTCAACCTCATCTT
GTTGGTTGTGCTACGTCTCTACGACGAGTTGATAAAGAAACTTGTGCCAATAACAAACAACTGCACAGATCAACGTTGGAAGTGTTTCAAGAATTTTCTTGGGGCGTTGG
ACGGAACGTACATCAAGTTCGATCTCCCCGCAGTAGATCGCCCTACGTTCAGAATGCGTAAGGGAAAAATTACGACTAATGTACTCGGTATTTGCAACATGAAAAGGGAT
TTCGTATACGTCCTCGCTGGTTGGGAAGGATCCGCAGCAGACTCGTGGATTCTCCGGGATGCCCTTGCACGACACAACAGACTGTTATCCAAATGCTGGAAATTTTTTTG
TCTCATACAGAGTGAGAGTTACCACTTGCAAGAGTGGCGTGGGCCTGAAAATGCCCCAACCACTGCAAAGGAATACTTCAACATGAAGCACTCTTTTACAAGGAATGTGA
TTGAGAGCGCCTTTGGTGTTCCGAAGGGTCATTGGGCAATACTTCGTGGGAAGTCGTACTATCCCCTCCAAGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCGATGTTCTTGCACGTTCTTGCCCATGACGTGAAGAGTCGTGTAATTCAACGAGAATTTGTACGGTCGGAAGAGACAGTATCGCGACATTTCAACCTCATCTT
GTTGGTTGTGCTACGTCTCTACGACGAGTTGATAAAGAAACTTGTGCCAATAACAAACAACTGCACAGATCAACGTTGGAAGTGTTTCAAGAATTTTCTTGGGGCGTTGG
ACGGAACGTACATCAAGTTCGATCTCCCCGCAGTAGATCGCCCTACGTTCAGAATGCGTAAGGGAAAAATTACGACTAATGTACTCGGTATTTGCAACATGAAAAGGGAT
TTCGTATACGTCCTCGCTGGTTGGGAAGGATCCGCAGCAGACTCGTGGATTCTCCGGGATGCCCTTGCACGACACAACAGACTGTTATCCAAATGCTGGAAATTTTTTTG
TCTCATACAGAGTGAGAGTTACCACTTGCAAGAGTGGCGTGGGCCTGAAAATGCCCCAACCACTGCAAAGGAATACTTCAACATGAAGCACTCTTTTACAAGGAATGTGA
TTGAGAGCGCCTTTGGTGTTCCGAAGGGTCATTGGGCAATACTTCGTGGGAAGTCGTACTATCCCCTCCAAGTCTAG
Protein sequenceShow/hide protein sequence
MVAMFLHVLAHDVKSRVIQREFVRSEETVSRHFNLILLVVLRLYDELIKKLVPITNNCTDQRWKCFKNFLGALDGTYIKFDLPAVDRPTFRMRKGKITTNVLGICNMKRD
FVYVLAGWEGSAADSWILRDALARHNRLLSKCWKFFCLIQSESYHLQEWRGPENAPTTAKEYFNMKHSFTRNVIESAFGVPKGHWAILRGKSYYPLQV