| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026033.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.4e-121 | 86.56 | Show/hide |
Query: INSSDTCVYSKMLITDTKFFLSSH-FEMKD----------LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSV
+NS D+ ++ + + ++ + +H +E+ D LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSV
Subjt: INSSDTCVYSKMLITDTKFFLSSH-FEMKD----------LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSV
Query: SQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAIS
SQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAIS
Subjt: SQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAIS
Query: WKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLWGTSVPESIQCDS
WKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLWGTSVPESIQCDS
Subjt: WKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLWGTSVPESIQCDS
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| KAA0049695.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.8e-122 | 93.48 | Show/hide |
Query: LITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDI
L+TDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFD FDVSPVRTPFDASKHL KNKGDSVSQPEYAKIIGSVMYLMNYTRPDI
Subjt: LITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDI
Query: AYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALEL
AYAVSRLSRYTHNP+RYHWD LR LLRYLKGTIDYCL+FNKFP +LEGYCDANWV DNDEVNST GYVFLLGGGAISWKSTKQTCIARSTMESEFIALEL
Subjt: AYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALEL
Query: AGQEVVWIKNLLGDVPLWGTSVPESIQCDS
AGQE WIKNLLGDVPLWGT VP SIQCDS
Subjt: AGQEVVWIKNLLGDVPLWGTSVPESIQCDS
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| KAD6453934.1 hypothetical protein E3N88_08640 [Mikania micrantha] | 1.6e-117 | 66.45 | Show/hide |
Query: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVYSK---------------ML--------ITDTKFFLSSHFEMKDL
M QPEGF +SG E+KVCKLRKSLYGLKQAPK+WY+KF+ TL +G+ +N+SD+CVYSK ML I TK FLSS FEMKDL
Subjt: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVYSK---------------ML--------ITDTKFFLSSHFEMKDL
Query: GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYH
GEADVILGVKI++ +SLCQSHY+E++LKKFD F+++PV+TP+D S LKKN +SVSQ EYAKIIGSVM+LMNYTRPDIAY VSRLSRYTHNP++ H
Subjt: GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYH
Query: WDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLW
W A+ RL+RYL+GT++ CLH+NKFP +LEGYCDANWV DNDEV+ST GYVF++GGGAISWKS+KQTCIARSTMESEFIALELAGQE W++ LL D+P W
Subjt: WDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLW
Query: GTS-VPESIQCDS
G + +P + CDS
Subjt: GTS-VPESIQCDS
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| TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 9.3e-158 | 89.1 | Show/hide |
Query: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVYSKM-----------------------LITDTKFFLSSHFEMKDL
MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWY+KFNNTLITNGFKINSSDTCVYSKM LITDTK+FLSSHFEMKDL
Subjt: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVYSKM-----------------------LITDTKFFLSSHFEMKDL
Query: GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYH
GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYH
Subjt: GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYH
Query: WDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLW
WDALR LLRYLKGTIDYCLHF KFP +LEGYCDANWV DNDEVNST GYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQE WIKNLLGDVPLW
Subjt: WDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLW
Query: GTSVPESIQCDS
GTSVP SIQCDS
Subjt: GTSVPESIQCDS
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| TYK22837.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.2e-122 | 99.54 | Show/hide |
Query: MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNP
MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNP
Subjt: MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNP
Query: NRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGD
NRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYC+ANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGD
Subjt: NRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGD
Query: VPLWGTSVPESIQCDS
VPLWGTSVPESIQCDS
Subjt: VPLWGTSVPESIQCDS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SN16 Ty1-copia retrotransposon protein | 6.8e-122 | 86.56 | Show/hide |
Query: INSSDTCVYSKMLITDTKFFLSSH-FEMKD----------LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSV
+NS D+ ++ + + ++ + +H +E+ D LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSV
Subjt: INSSDTCVYSKMLITDTKFFLSSH-FEMKD----------LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSV
Query: SQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAIS
SQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAIS
Subjt: SQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAIS
Query: WKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLWGTSVPESIQCDS
WKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLWGTSVPESIQCDS
Subjt: WKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLWGTSVPESIQCDS
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| A0A5A7U7W6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-122 | 93.48 | Show/hide |
Query: LITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDI
L+TDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFD FDVSPVRTPFDASKHL KNKGDSVSQPEYAKIIGSVMYLMNYTRPDI
Subjt: LITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDI
Query: AYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALEL
AYAVSRLSRYTHNP+RYHWD LR LLRYLKGTIDYCL+FNKFP +LEGYCDANWV DNDEVNST GYVFLLGGGAISWKSTKQTCIARSTMESEFIALEL
Subjt: AYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALEL
Query: AGQEVVWIKNLLGDVPLWGTSVPESIQCDS
AGQE WIKNLLGDVPLWGT VP SIQCDS
Subjt: AGQEVVWIKNLLGDVPLWGTSVPESIQCDS
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| A0A5D3C5T2 Ty1-copia retrotransposon protein | 4.5e-158 | 89.1 | Show/hide |
Query: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVYSKM-----------------------LITDTKFFLSSHFEMKDL
MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWY+KFNNTLITNGFKINSSDTCVYSKM LITDTK+FLSSHFEMKDL
Subjt: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVYSKM-----------------------LITDTKFFLSSHFEMKDL
Query: GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYH
GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYH
Subjt: GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYH
Query: WDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLW
WDALR LLRYLKGTIDYCLHF KFP +LEGYCDANWV DNDEVNST GYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQE WIKNLLGDVPLW
Subjt: WDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLW
Query: GTSVPESIQCDS
GTSVP SIQCDS
Subjt: GTSVPESIQCDS
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| A0A5D3DGL6 Ty1-copia retrotransposon protein | 1.0e-122 | 99.54 | Show/hide |
Query: MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNP
MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNP
Subjt: MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNP
Query: NRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGD
NRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYC+ANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGD
Subjt: NRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGD
Query: VPLWGTSVPESIQCDS
VPLWGTSVPESIQCDS
Subjt: VPLWGTSVPESIQCDS
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| A0A5N6PGV2 Reverse transcriptase Ty1/copia-type domain-containing protein | 7.8e-118 | 66.45 | Show/hide |
Query: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVYSK---------------ML--------ITDTKFFLSSHFEMKDL
M QPEGF +SG E+KVCKLRKSLYGLKQAPK+WY+KF+ TL +G+ +N+SD+CVYSK ML I TK FLSS FEMKDL
Subjt: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVYSK---------------ML--------ITDTKFFLSSHFEMKDL
Query: GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYH
GEADVILGVKI++ +SLCQSHY+E++LKKFD F+++PV+TP+D S LKKN +SVSQ EYAKIIGSVM+LMNYTRPDIAY VSRLSRYTHNP++ H
Subjt: GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYH
Query: WDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLW
W A+ RL+RYL+GT++ CLH+NKFP +LEGYCDANWV DNDEV+ST GYVF++GGGAISWKS+KQTCIARSTMESEFIALELAGQE W++ LL D+P W
Subjt: WDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLW
Query: GTS-VPESIQCDS
G + +P + CDS
Subjt: GTS-VPESIQCDS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.3e-40 | 33.99 | Show/hide |
Query: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVY-------------------------SKMLITDTKFFLSSHFEMK
M P+G IS + VCKL K++YGLKQA + W++ F L F +S D C+Y + + K +L F M
Subjt: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVY-------------------------SKMLITDTKFFLSSHFEMK
Query: DLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNR
DL E +G++I + + L QS YV+KIL KF+ + + V TP + + + D +IG +MY+M TRPD+ AV+ LSRY+ N
Subjt: DLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNR
Query: YHWDALRRLLRYLKGTIDYCLHFNK---FPTILEGYCDANWVIDNDEVNSTCGYVF-LLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLL
W L+R+LRYLKGTID L F K F + GY D++W + ST GY+F + I W + +Q +A S+ E+E++AL A +E +W+K LL
Subjt: YHWDALRRLLRYLKGTIDYCLHFNK---FPTILEGYCDANWVIDNDEVNSTCGYVF-LLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLL
Query: GDV
+
Subjt: GDV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.8e-61 | 42.26 | Show/hide |
Query: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVY------------------------SKMLITDTKFFLSSHFEMKD
M QPEGF+++G+++ VCKL KSLYGLKQAP+QWY KF++ + + + SD CVY K LI K LS F+MKD
Subjt: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVY------------------------SKMLITDTKFFLSSHFEMKD
Query: LGEADVILGVKIRKNKTS--LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKK--------NKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRL
LG A ILG+KI + +TS L L Q Y+E++L++F+ + PV TP L K KG+ P Y+ +GS+MY M TRPDIA+AV +
Subjt: LGEADVILGVKIRKNKTS--LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKK--------NKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRL
Query: SRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVW
SR+ NP + HW+A++ +LRYL+GT CL F IL+GY DA+ D D S+ GY+F GGAISW+S Q C+A ST E+E+IA G+E++W
Subjt: SRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTILEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVW
Query: IKNLLGDVPL
+K L ++ L
Subjt: IKNLLGDVPL
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 2.0e-30 | 34.6 | Show/hide |
Query: SKMLITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTR
S L+ F LSS F MKDLG LG++I+ + + L L Q+ Y E+IL D P+ TP + + ++ I+G++ YL TR
Subjt: SKMLITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTR
Query: PDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTI-LEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFI
PDI+YAV+ + + H P +D L+R+LRY+KGTI + L+ +K + ++ +CD++W ST G+ LG ISW + +Q ++RS+ E+E+
Subjt: PDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTI-LEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFI
Query: ALELAGQEVVW
AL L E+ W
Subjt: ALELAGQEVVW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.7e-50 | 37.9 | Show/hide |
Query: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVY-----------------------SKMLITDTKFFLSSHFEMKDL
M+QP GF + N VCKLRK+LYGLKQAP+ WY + N L+T GF + SDT ++ L+ +T LS F +KD
Subjt: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVY-----------------------SKMLITDTKFFLSSHFEMKDL
Query: GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRY
E LG++ ++ T L L Q Y+ +L + + PV TP S L G ++ P EY I+GS+ YL +TRPDI+YAV+RLS++ H P
Subjt: GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRY
Query: HWDALRRLLRYLKGTIDYCLHFNKFPTI-LEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVP
H AL+R+LRYL GT ++ + K T+ L Y DA+W D D+ ST GY+ LG ISW S KQ + RS+ E+E+ ++ E+ WI +LL ++
Subjt: HWDALRRLLRYLKGTIDYCLHFNKFPTI-LEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVP
Query: LWGTSVPESIQCDS
+ T P I CD+
Subjt: LWGTSVPESIQCDS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-48 | 36.31 | Show/hide |
Query: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVY-----------------------SKMLITDTKFFLSSHFEMKDL
M+QP GF + + VC+LRK++YGLKQAP+ WY + L+T GF + SDT ++ +L+ T LS F +K+
Subjt: MTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVY-----------------------SKMLITDTKFFLSSHFEMKDL
Query: GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRY
+ LG++ ++ L L Q Y +L + + PV TP S L + G + P EY I+GS+ YL +TRPD++YAV+RLS+Y H P
Subjt: GEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRY
Query: HWDALRRLLRYLKGTIDYCLHFNKFPTI-LEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVP
HW+AL+R+LRYL GT D+ + K T+ L Y DA+W D D+ ST GY+ LG ISW S KQ + RS+ E+E+ ++ E+ WI +LL ++
Subjt: HWDALRRLLRYLKGTIDYCLHFNKFPTI-LEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVP
Query: LWGTSVPESIQCDS
+ S P I CD+
Subjt: LWGTSVPESIQCDS
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.1e-39 | 32.89 | Show/hide |
Query: NKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVYSKMLIT-----------------------DTKFFLSSHFEMKDLGEADVILGVKIRK
N VC L+KS+YGLKQA +QW+ KF+ TLI GF + SD + K+ T + K L S F+++DLG LG++I +
Subjt: NKVCKLRKSLYGLKQAPKQWYDKFNNTLITNGFKINSSDTCVYSKMLIT-----------------------DTKFFLSSHFEMKDLGEADVILGVKIRK
Query: NKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNK-GDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLK
+ +++CQ Y +L + P P D S + GD V Y ++IG +MYL TR DI++AV++LS+++ P H A+ ++L Y+K
Subjt: NKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNK-GDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLK
Query: GTIDYCLHFNKFPTI-LEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLWGTSVPESIQCD
GT+ L ++ + L+ + DA++ D ST GY LG ISWKS KQ +++S+ E+E+ AL A E++W+ ++ L S P + CD
Subjt: GTIDYCLHFNKFPTI-LEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEVVWIKNLLGDVPLWGTSVPESIQCD
Query: S
+
Subjt: S
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 1.4e-05 | 31.33 | Show/hide |
Query: MYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTI-LEGYCDANWVIDNDEVNSTCGYVFLL
MYL TRPD+ +AV+RLS+++ A+ ++L Y+KGT+ L ++ + L+ + D++W D S G+ L+
Subjt: MYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTI-LEGYCDANWVIDNDEVNSTCGYVFLL
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.4e-31 | 34.6 | Show/hide |
Query: SKMLITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTR
S L+ F LSS F MKDLG LG++I+ + + L L Q+ Y E+IL D P+ TP + + ++ I+G++ YL TR
Subjt: SKMLITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTR
Query: PDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTI-LEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFI
PDI+YAV+ + + H P +D L+R+LRY+KGTI + L+ +K + ++ +CD++W ST G+ LG ISW + +Q ++RS+ E+E+
Subjt: PDIAYAVSRLSRYTHNPNRYHWDALRRLLRYLKGTIDYCLHFNKFPTI-LEGYCDANWVIDNDEVNSTCGYVFLLGGGAISWKSTKQTCIARSTMESEFI
Query: ALELAGQEVVW
AL L E+ W
Subjt: ALELAGQEVVW
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