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Pay0020937 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020937
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionprotein RADIALIS-like 1
Genome locationchr01:18553446..18554571
RNA-Seq ExpressionPay0020937
SyntenyPay0020937
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017884 - SANT domain
IPR017930 - Myb domain
IPR044636 - Transcription factor RADIALIS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036170.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa]1.9e-3698.72Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
        MASMSAHGSGVWTAKQNKAFE+ALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG

XP_004151116.1 protein RADIALIS-like 1 [Cucumis sativus]7.8e-3596.1Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSR
        MAS+SAHGSGVWTAKQNKAFE+ALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYR+SR
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSR

XP_008447025.1 PREDICTED: protein RADIALIS-like 1 [Cucumis melo]6.4e-37100Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
        MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG

XP_022135728.1 protein RADIALIS-like 1 [Momordica charantia]2.0e-3085.9Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
        MASMSA+ SG WTAKQNKAFEKALA+YD+DTP+RW+NVAKAIG KTEEEVKRHYQ L+EDVKHIESG VPFPYRTSRG
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG

XP_022952073.1 protein RADIALIS-like 1 [Cucurbita moschata]3.9e-3492.31Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
        MASMSAHGSGVWTAKQNKAFE+ALAMYD+D PDRWLNVAKAIGGKTEEEVKRHYQ+L+EDVKHIESGKVPFPYR+SRG
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG

TrEMBL top hitse value%identityAlignment
A0A0A0K344 SANT domain-containing protein3.8e-3596.1Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSR
        MAS+SAHGSGVWTAKQNKAFE+ALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYR+SR
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSR

A0A1S3BGF6 protein RADIALIS-like 13.1e-37100Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
        MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG

A0A5A7SYM4 Protein RADIALIS-like 19.0e-3798.72Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
        MASMSAHGSGVWTAKQNKAFE+ALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG

A0A6J1GJG0 protein RADIALIS-like 11.9e-3492.31Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
        MASMSAHGSGVWTAKQNKAFE+ALAMYD+D PDRWLNVAKAIGGKTEEEVKRHYQ+L+EDVKHIESGKVPFPYR+SRG
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG

A0A6J1IA78 protein RADIALIS-like 11.9e-3492.31Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
        MASMSAHGSGVWTAKQNKAFE+ALAMYD+D PDRWLNVAKAIGGKTEEEVKRHYQ+L+EDVKHIESGKVPFPYR+SRG
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG

SwissProt top hitse value%identityAlignment
F4JVB8 Protein RADIALIS-like 16.9e-2670.51Show/hide
Query:  ASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRTSRG
        +SMS+  SG WTAKQNKAFE+ALA YD+DTP+RW NVAK +GGKT EEVKRHY+LL++D+  IE+G VPFP YRTS G
Subjt:  ASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRTSRG

Q1A173 Protein RADIALIS-like 66.0e-2265.79Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRT
        MAS S      WT  QNK FE+ALA+YDKDTPDRW NVAKA+GGKT EEVKRHY +L+ED+ +IE+G+VP P Y+T
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRT

Q58FS3 Transcription factor RADIALIS5.8e-2569.74Show/hide
Query:  SAHGSG-VWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRTSRG
        S  GSG  W+AK+NKAFE+ALA+YDKDTPDRW NVA+A+ G+T EEVK+HY++L+ED+K+IESGKVPFP YRT+ G
Subjt:  SAHGSG-VWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRTSRG

Q6NNN0 Protein RADIALIS-like 37.9e-2261.54Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG
        MAS S   S  WT K+NK FE+ALA YD+DTPDRW NVA+A+GGK+ EEV+RHY+LL+ DV  IESG+ P P   S G
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG

Q9SIJ5 Protein RADIALIS-like 25.8e-2567.53Show/hide
Query:  SMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRTSRG
        SMS++GSG WT KQNKAFE+ALA+YD+DTPDRW NVA+A+GGKT EE KR Y LL+ D++ IE+G VPFP Y+T+ G
Subjt:  SMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRTSRG

Arabidopsis top hitse value%identityAlignment
AT1G19510.1 RAD-like 59.6e-2364.47Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRT
        MAS S   S  WT+KQNK FE+ALA+YDKDTPDRW NVAKA+G K+ EEVKRHY +L+ED+ +IE   VP P Y+T
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRT

AT1G75250.1 RAD-like 64.3e-2365.79Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRT
        MAS S      WT  QNK FE+ALA+YDKDTPDRW NVAKA+GGKT EEVKRHY +L+ED+ +IE+G+VP P Y+T
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRT

AT1G75250.2 RAD-like 64.3e-2365.79Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRT
        MAS S      WT  QNK FE+ALA+YDKDTPDRW NVAKA+GGKT EEVKRHY +L+ED+ +IE+G+VP P Y+T
Subjt:  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRT

AT2G21650.1 Homeodomain-like superfamily protein4.2e-2667.53Show/hide
Query:  SMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRTSRG
        SMS++GSG WT KQNKAFE+ALA+YD+DTPDRW NVA+A+GGKT EE KR Y LL+ D++ IE+G VPFP Y+T+ G
Subjt:  SMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRTSRG

AT4G39250.1 RAD-like 14.9e-2770.51Show/hide
Query:  ASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRTSRG
        +SMS+  SG WTAKQNKAFE+ALA YD+DTP+RW NVAK +GGKT EEVKRHY+LL++D+  IE+G VPFP YRTS G
Subjt:  ASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRTSRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATGTCAGCTCATGGGTCAGGTGTATGGACTGCAAAGCAAAACAAGGCATTTGAGAAAGCTTTGGCAATGTATGATAAAGACACACCCGATAGATGGTTGAA
TGTTGCAAAAGCCATTGGTGGAAAAACTGAAGAGGAAGTCAAAAGGCATTACCAACTTCTTTTGGAGGATGTTAAGCATATTGAGTCTGGCAAAGTTCCTTTTCCTTATA
GAACCTCAAGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAATGTCAGCTCATGGGTCAGGTGTATGGACTGCAAAGCAAAACAAGGCATTTGAGAAAGCTTTGGCAATGTATGATAAAGACACACCCGATAGATGGTTGAA
TGTTGCAAAAGCCATTGGTGGAAAAACTGAAGAGGAAGTCAAAAGGCATTACCAACTTCTTTTGGAGGATGTTAAGCATATTGAGTCTGGCAAAGTTCCTTTTCCTTATA
GAACCTCAAGAGGATGA
Protein sequenceShow/hide protein sequence
MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRTSRG