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Pay0020938 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020938
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPol protein
Genome locationchr10:13003059..13003475
RNA-Seq ExpressionPay0020938
SyntenyPay0020938
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037486.1 pol protein [Cucumis melo var. makuwa]2.7e-4682.35Show/hide
Query:  DMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQPVEILAREVKML
        DMVFLK+  MK VLRFEKKGKLSPRFV  F+ILERIGPVAYRL L  +FSAVHDV HVS+LR+YVAD THVVDFEPL INENL+YE+QPVEILAREVKML
Subjt:  DMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQPVEILAREVKML

Query:  RNTGIALVKVLWRNHEVEE
        RN GIALVKVLWRNH VE+
Subjt:  RNTGIALVKVLWRNHEVEE

KAA0045487.1 pol protein [Cucumis melo var. makuwa]7.8e-4681.51Show/hide
Query:  DMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQPVEILAREVKML
        DMVFLK+  MK VLRFEKKGKLSPRFV  FEILER GPVAYRL L  + S VHDV HVSMLRKYVADSTHVVDFEPL INENL+YE+QP+EILAREVK+L
Subjt:  DMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQPVEILAREVKML

Query:  RNTGIALVKVLWRNHEVEE
        RN GI+LVKVLWRNH VEE
Subjt:  RNTGIALVKVLWRNHEVEE

KAA0047631.1 pol protein [Cucumis melo var. makuwa]2.1e-4684.03Show/hide
Query:  DMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQPVEILAREVKML
        DMVFLK+  MKDVLRF+KKGKLSPRFV SFEILERIGPVAYRL L  AFS VHDV HVSMLRKYVAD THVVDFEPL INENL+YE++PVEILAREVKML
Subjt:  DMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQPVEILAREVKML

Query:  RNTGIALVKVLWRNHEVEE
        RN  IALVKVLWRNH V E
Subjt:  RNTGIALVKVLWRNHEVEE

KAA0067510.1 pol protein [Cucumis melo var. makuwa]1.9e-6899.26Show/hide
Query:  MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP
        MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHD+LHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP
Subjt:  MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP

Query:  VEILAREVKMLRNTGIALVKVLWRNHEVEEPHGRE
        VEILAREVKMLRNTGIALVKVLWRNHEVEEPHGRE
Subjt:  VEILAREVKMLRNTGIALVKVLWRNHEVEEPHGRE

XP_016902031.1 PREDICTED: uncharacterized protein LOC107991506 [Cucumis melo]2.7e-7099.28Show/hide
Query:  MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP
        MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHD+LHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP
Subjt:  MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP

Query:  VEILAREVKMLRNTGIALVKVLWRNHEVEEPHGRESMT
        VEILAREVKMLRNTGIALVKVLWRNHEVEEPHGRESMT
Subjt:  VEILAREVKMLRNTGIALVKVLWRNHEVEEPHGRESMT

TrEMBL top hitse value%identityAlignment
A0A1S4E1C8 uncharacterized protein LOC1079915061.3e-7099.28Show/hide
Query:  MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP
        MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHD+LHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP
Subjt:  MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP

Query:  VEILAREVKMLRNTGIALVKVLWRNHEVEEPHGRESMT
        VEILAREVKMLRNTGIALVKVLWRNHEVEEPHGRESMT
Subjt:  VEILAREVKMLRNTGIALVKVLWRNHEVEEPHGRESMT

A0A5A7SQD9 Pol protein3.8e-4675.38Show/hide
Query:  MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP
        MNG+ I S M +   LK+  MK+ LRFEKKGKLSP F+ SFEILERI P+AYRL LS  FS VHDV HVSMLRKYV DSTHVVDFEPLHINENL+YE+Q 
Subjt:  MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP

Query:  VEILAREVKMLRNTGIALVKVLWRNHEVEE
        VEILAREVKMLRN GIALVKVLWRNH  E+
Subjt:  VEILAREVKMLRNTGIALVKVLWRNHEVEE

A0A5A7T5R3 Pol protein1.3e-4682.35Show/hide
Query:  DMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQPVEILAREVKML
        DMVFLK+  MK VLRFEKKGKLSPRFV  F+ILERIGPVAYRL L  +FSAVHDV HVS+LR+YVAD THVVDFEPL INENL+YE+QPVEILAREVKML
Subjt:  DMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQPVEILAREVKML

Query:  RNTGIALVKVLWRNHEVEE
        RN GIALVKVLWRNH VE+
Subjt:  RNTGIALVKVLWRNHEVEE

A0A5A7U220 Pol protein1.0e-4684.03Show/hide
Query:  DMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQPVEILAREVKML
        DMVFLK+  MKDVLRF+KKGKLSPRFV SFEILERIGPVAYRL L  AFS VHDV HVSMLRKYVAD THVVDFEPL INENL+YE++PVEILAREVKML
Subjt:  DMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQPVEILAREVKML

Query:  RNTGIALVKVLWRNHEVEE
        RN  IALVKVLWRNH V E
Subjt:  RNTGIALVKVLWRNHEVEE

A0A5D3DFQ8 Pol protein9.3e-6999.26Show/hide
Query:  MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP
        MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHD+LHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP
Subjt:  MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQP

Query:  VEILAREVKMLRNTGIALVKVLWRNHEVEEPHGRE
        VEILAREVKMLRNTGIALVKVLWRNHEVEEPHGRE
Subjt:  VEILAREVKMLRNTGIALVKVLWRNHEVEEPHGRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGCGTAAGGATCTCGAGTTTCATGTGTGACATGGTTTTTCTGAAGATAACACATATGAAGGATGTTTTGAGGTTTGAGAAGAAAGGGAAGCTAAGTCCACGTTT
TGTAAGGTCGTTTGAGATACTTGAGCGGATTGGCCCCGTGGCTTACCGTTTGACGTTGTCTTCAGCGTTTTCTGCAGTACATGACGTACTCCATGTTTCTATGCTGAGGA
AGTATGTCGCAGACTCAACACATGTAGTTGACTTTGAGCCATTGCACATCAATGAGAACTTGGCCTATGAGAAGCAACCGGTCGAGATTTTGGCGAGAGAGGTCAAGATG
CTTCGTAATACGGGGATTGCGCTCGTCAAAGTTCTTTGGCGAAACCACGAAGTTGAAGAGCCACATGGAAGAGAGAGTATGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGCGTAAGGATCTCGAGTTTCATGTGTGACATGGTTTTTCTGAAGATAACACATATGAAGGATGTTTTGAGGTTTGAGAAGAAAGGGAAGCTAAGTCCACGTTT
TGTAAGGTCGTTTGAGATACTTGAGCGGATTGGCCCCGTGGCTTACCGTTTGACGTTGTCTTCAGCGTTTTCTGCAGTACATGACGTACTCCATGTTTCTATGCTGAGGA
AGTATGTCGCAGACTCAACACATGTAGTTGACTTTGAGCCATTGCACATCAATGAGAACTTGGCCTATGAGAAGCAACCGGTCGAGATTTTGGCGAGAGAGGTCAAGATG
CTTCGTAATACGGGGATTGCGCTCGTCAAAGTTCTTTGGCGAAACCACGAAGTTGAAGAGCCACATGGAAGAGAGAGTATGACTTGA
Protein sequenceShow/hide protein sequence
MNGVRISSFMCDMVFLKITHMKDVLRFEKKGKLSPRFVRSFEILERIGPVAYRLTLSSAFSAVHDVLHVSMLRKYVADSTHVVDFEPLHINENLAYEKQPVEILAREVKM
LRNTGIALVKVLWRNHEVEEPHGRESMT