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Pay0020954 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020954
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B
Genome locationchr12:26342830..26348214
RNA-Seq ExpressionPay0020954
SyntenyPay0020954
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019377 - NADH-ubiquinone oxidoreductase, subunit 10
IPR039993 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137473.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucumis sativus]1.1e-55100Show/hide
Query:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  PAESE
        PAESE
Subjt:  PAESE

XP_022137450.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Momordica charantia]5.0e-5395.24Show/hide
Query:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGR+KTVEFDESPPDDFD ENPYKDPVAMLEMRE+IVREKWIDIEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  PAESE
        P ESE
Subjt:  PAESE

XP_022924082.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita moschata]1.1e-5295.24Show/hide
Query:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPE+PYKDPVAMLEMRE+IVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  PAESE
          ESE
Subjt:  PAESE

XP_022994087.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima]7.3e-5294.29Show/hide
Query:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFD E+PYKDPVAMLEMRE+IVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  PAESE
          E+E
Subjt:  PAESE

XP_038894613.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida]1.3e-5397.14Show/hide
Query:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPE+PYKDPVAMLEMRE+IVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  PAESE
         AESE
Subjt:  PAESE

TrEMBL top hitse value%identityAlignment
A0A0A0LSZ4 Uncharacterized protein5.2e-56100Show/hide
Query:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  PAESE
        PAESE
Subjt:  PAESE

A0A1S3C7E2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B5.2e-56100Show/hide
Query:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  PAESE
        PAESE
Subjt:  PAESE

A0A6J1C6P3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B2.4e-5395.24Show/hide
Query:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGR+KTVEFDESPPDDFD ENPYKDPVAMLEMRE+IVREKWIDIEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  PAESE
        P ESE
Subjt:  PAESE

A0A6J1E7Z3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B5.4e-5395.24Show/hide
Query:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPE+PYKDPVAMLEMRE+IVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  PAESE
          ESE
Subjt:  PAESE

A0A6J1KJX6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B5.4e-5395.24Show/hide
Query:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDPE+PYKDPVAMLEMRE+IVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  PAESE
          ESE
Subjt:  PAESE

SwissProt top hitse value%identityAlignment
P80267 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 (Fragment)1.5e-0472.41Show/hide
Query:  GRKKTVEFDESPPDDFDPENPYKDPVAML
        GRKK V+FDE  PDDFDP NPYK  VA L
Subjt:  GRKKTVEFDESPPDDFDPENPYKDPVAML

Q03015 NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial1.5e-0740.62Show/hide
Query:  PDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYL
        P  FD  + Y D   + + ++ I+RE+W+ +   +++RE+L  CY  EGVNHL+KC HL ++YL
Subjt:  PDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYL

Q94C12 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B5.2e-4580.19Show/hide
Query:  MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FDPENPYKDPVAM+EMRE+IVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  EPAESE
        E  E+E
Subjt:  EPAESE

Q9M9B4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A2.2e-4379.44Show/hide
Query:  MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPK-
        MGRKK + EF+ES PD FDPENPYKDPVAM+EMRE+IVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPK-

Query:  --VEPAE
          VE AE
Subjt:  --VEPAE

Arabidopsis top hitse value%identityAlignment
AT1G49140.1 Complex I subunit NDUFS61.6e-4479.44Show/hide
Query:  MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPK-
        MGRKK + EF+ES PD FDPENPYKDPVAM+EMRE+IVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPK-

Query:  --VEPAE
          VE AE
Subjt:  --VEPAE

AT3G18410.1 Complex I subunit NDUFS63.7e-4680.19Show/hide
Query:  MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FDPENPYKDPVAM+EMRE+IVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  EPAESE
        E  E+E
Subjt:  EPAESE

AT3G18410.2 Complex I subunit NDUFS63.7e-4680.19Show/hide
Query:  MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FDPENPYKDPVAM+EMRE+IVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  EPAESE
        E  E+E
Subjt:  EPAESE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGAAGAAGACAGTGGAGTTCGATGAATCTCCCCCGGACGATTTCGATCCGGAGAATCCGTATAAGGATCCAGTGGCGATGTTAGAGATGAGGGAATACATTGT
AAGAGAGAAGTGGATCGATATTGAAAAAGCCAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGTATTGAAGGAGTCAACCATCTGCAGAAATGTCGTCACCTCGTTC
AACAATACCTTGATTCCACTCGTGGCATCGGCTGGGGCAAGGACGGGCGTCACCCATCCCTTCACGGTCCTAAAGTGGAGCCAGCCGAATCGGAGTGA
mRNA sequenceShow/hide mRNA sequence
GTTGCGCGAAAGCGATTCGTAGACTGAGAACAGGCACAAGGAAGAGGAGAGAAAGAGGAAAAGCTATGGGGAGGAAGAAGACAGTGGAGTTCGATGAATCTCCCCCGGAC
GATTTCGATCCGGAGAATCCGTATAAGGATCCAGTGGCGATGTTAGAGATGAGGGAATACATTGTAAGAGAGAAGTGGATCGATATTGAAAAAGCCAAGATACTGAGGGA
AAAGCTCAGATGGTGCTACCGTATTGAAGGAGTCAACCATCTGCAGAAATGTCGTCACCTCGTTCAACAATACCTTGATTCCACTCGTGGCATCGGCTGGGGCAAGGACG
GGCGTCACCCATCCCTTCACGGTCCTAAAGTGGAGCCAGCCGAATCGGAGTGAATCGCTGGGTGGAACAACGGTAAACTAAATGGCTTGCAGGGAAATGTTTGGATGGTT
TGACGACCCTCATCAGCTGTAGTTTTTATTATTATTATTTCTTTATAAAAGAAAAAAGGAATGTGCATGGATCATCACAAACAATGCTATTGGCAATTGATTTACGTTAG
GTTTTTTGTTATTGTCAATAAAACTTAGACGTCAGAAACACACCCAAATAATCAAACCTCTATCACTGCATCCTTCTGTTCAACCTCCGTATTACTCTTTTCGTTTAAAG
TATGGCTTCATCAGGTTGCCTATTTTAGAAAATTGCAAGCCATACTGAGACCCATCACAAGACTTTATAGTCAACAATTCGATTATGAATTTGTAATTGGATTCTGCTTA
AGTCGTTTCCTGTGCAAGTTTAATTTGTATTTGGATTACCGACTAGATCATTTTGTGCTTATCTCGCCTAATCTCATATGGAACAATTCTATAACCTAATATTAATTTCT
ATTCTTGATTGAACTCATTCTCTC
Protein sequenceShow/hide protein sequence
MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE