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Pay0020972 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020972
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTransducin beta-like protein 2
Genome locationchr04:13629135..13638577
RNA-Seq ExpressionPay0020972
SyntenyPay0020972
Gene Ontology termsGO:0006270 - DNA replication initiation (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0042555 - MCM complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0042393 - histone binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051331.1 transducin beta-like protein 2 [Cucumis melo var. makuwa]2.4e-0780.56Show/hide
Query:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
        +DQNKKHH LDLNTLKGHRDS+TGLCF+S+GSNL +
Subjt:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
TYK23884.1 putative tRNA pseudouridine synthase Pus10 [Cucumis melo var. makuwa]2.4e-0780.56Show/hide
Query:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
        +DQNKKHH LDLNTLKGHRDS+TGLCF+S+GSNL +
Subjt:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
XP_004133912.1 transducin beta-like protein 2 [Cucumis sativus]2.1e-0677.78Show/hide
Query:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
        +DQNKKHH LDLNTLKGH DS TGLCF+S+GSNL +
Subjt:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
XP_008438164.1 PREDICTED: transducin beta-like protein 2 [Cucumis melo]1.2e-0677.78Show/hide
Query:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
        +DQNKKHH LDLNTLKGH DS TGLCF+S+GSNL +
Subjt:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
XP_038903597.1 transducin beta-like protein 2 [Benincasa hispida]2.1e-0677.78Show/hide
Query:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
        +DQNKKHH LDLNTLKGH DS TGLCF+S+GSNL +
Subjt:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
TrEMBL top hitse value%identityAlignment
A0A0A0L3T3 Uncharacterized protein1.0e-0677.78Show/hide
Query:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
        +DQNKKHH LDLNTLKGH DS TGLCF+S+GSNL +
Subjt:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
A0A1S3AVT9 transducin beta-like protein 25.8e-0777.78Show/hide
Query:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
        +DQNKKHH LDLNTLKGH DS TGLCF+S+GSNL +
Subjt:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
A0A5A7UCQ4 Transducin beta-like protein 21.2e-0780.56Show/hide
Query:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
        +DQNKKHH LDLNTLKGHRDS+TGLCF+S+GSNL +
Subjt:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
A0A5D3D2J0 Transducin beta-like protein 25.8e-0777.78Show/hide
Query:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
        +DQNKKHH LDLNTLKGH DS TGLCF+S+GSNL +
Subjt:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
A0A5D3DJR6 DNA replication licensing factor MCM71.2e-0780.56Show/hide
Query:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
        +DQNKKHH LDLNTLKGHRDS+TGLCF+S+GSNL +
Subjt:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00090.1 Transducin/WD40 repeat-like superfamily protein4.0e-0863.89Show/hide
Query:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS
        ++QNK+HH LDLNTLKGH D+ TGLCF+S+G +L +
Subjt:  RDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCATACAGAGCGCCATTGATTCTAAGGAAATTACACTTGGGGATTTAGAAAGCTATGTCAAAGTGTATGTCGAACGTTCACGTGATCAAAACAAGAAACATCA
CCTGTTAGATTTGAATACACTGAAAGGTCACAGAGATTCTGCCACTGGATTATGCTTCACTTCAAATGGAAGTAATCTGACGAGTGTTACCAATTCTTGTATATGTTTCC
TATTCTTTAAACGACCTACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTCATACAGAGCGCCATTGATTCTAAGGAAATTACACTTGGGGATTTAGAAAGCTATGTCAAAGTGTATGTCGAACGTTCACGTGATCAAAACAAGAAACATCA
CCTGTTAGATTTGAATACACTGAAAGGTCACAGAGATTCTGCCACTGGATTATGCTTCACTTCAAATGGAAGTAATCTGACGAGTGTTACCAATTCTTGTATATGTTTCC
TATTCTTTAAACGACCTACCTAA
Protein sequenceShow/hide protein sequence
MDFIQSAIDSKEITLGDLESYVKVYVERSRDQNKKHHLLDLNTLKGHRDSATGLCFTSNGSNLTSVTNSCICFLFFKRPT