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Pay0020995 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0020995
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag/pol protein
Genome locationchr10:15651760..15652221
RNA-Seq ExpressionPay0020995
SyntenyPay0020995
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADJ18449.1 gag/pol protein, partial [Bryonia dioica]2.3e-6784.31Show/hide
Query:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK
        MN SIVQLLAS+KLNGDNY+ WK NLNTILVV+DLRFVLTEECPQAPA  ANR VREAYDRWVKAN+KARVYI+A+M+DVLAKKH+S+ATAK IMDSL +
Subjt:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK

Query:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN
        MFGQPSWSL+HEAIK+IYTK++KEGTSVREHVLDMMMHFNIAEVNGG I+EAN
Subjt:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN

KAA0046201.1 gag/pol protein [Cucumis melo var. makuwa]5.8e-74100Show/hide
Query:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK
        MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK
Subjt:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK

Query:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAE
        MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAE
Subjt:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAE

KAA0048103.1 gag/pol protein [Cucumis melo var. makuwa]2.6e-6683.66Show/hide
Query:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK
        MN+ IVQLLAS+KLN DNYTTWK NLNTILVV+DLRFVLTEECPQ PAS ANR  REAYDRW+KANEKARVYI+A+MSDVLAKKHESLATAKEIMDSL  
Subjt:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK

Query:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN
        MFGQP WSL+H+AIKYIYTK++KEGTS+REHVL MM+HFNIAEVNGG+I+EAN
Subjt:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN

KAA0050233.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-6989.4Show/hide
Query:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK
        MNNSIVQLLASQKLNGDNY TWK NLN ILV++DLRFVLTEE PQ PAS AN+NVREAYDRWVKANEKARVYI A+MSDVLAKKHESLATAKEIMDSL +
Subjt:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK

Query:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINE
        MFGQPSWSL+HEAIKYIYTKQ+KEGTSVREHVLDMMMHFNIAEVNGG INE
Subjt:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINE

XP_038882358.1 uncharacterized protein LOC120073622 [Benincasa hispida]4.0e-6783.01Show/hide
Query:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK
        MN+SI+QLL S+KLNGDNY+ WK NLNTILVV+DLRFVLTEECPQAP S ANR VREAYDRWVKANEKAR+YI+A+MSDVLAKKHESLATAKEI+DSL +
Subjt:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK

Query:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN
        +FGQPSWSL+HEAIK+IYTK++KEGTSVREHVLDMMM+FNIAE NGG I+EAN
Subjt:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN

TrEMBL top hitse value%identityAlignment
A0A5A7T0E9 Gag/pol protein2.1e-6682.35Show/hide
Query:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK
        MN+SIVQLLAS+KLNGDNY TWK NLNTILVV+DLRF+LTEECPQ P S ANR  REAYDRW+KANEKARVYI+A+MSDVLAKKHE LAT KEI+DSL  
Subjt:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK

Query:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN
        MFGQP WSL+HEAIKYIYTK++K+GTSVREHVLDMMMHFNI EVNGG+I+EAN
Subjt:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN

A0A5A7TWX1 Gag/pol protein1.3e-6683.66Show/hide
Query:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK
        MN+ IVQLLAS+KLN DNYTTWK NLNTILVV+DLRFVLTEECPQ PAS ANR  REAYDRW+KANEKARVYI+A+MSDVLAKKHESLATAKEIMDSL  
Subjt:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK

Query:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN
        MFGQP WSL+H+AIKYIYTK++KEGTS+REHVL MM+HFNIAEVNGG+I+EAN
Subjt:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN

A0A5A7TXW7 Gag/pol protein2.8e-74100Show/hide
Query:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK
        MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK
Subjt:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK

Query:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAE
        MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAE
Subjt:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAE

A0A5A7U2U6 Gag/pol protein9.3e-7089.4Show/hide
Query:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK
        MNNSIVQLLASQKLNGDNY TWK NLN ILV++DLRFVLTEE PQ PAS AN+NVREAYDRWVKANEKARVYI A+MSDVLAKKHESLATAKEIMDSL +
Subjt:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK

Query:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINE
        MFGQPSWSL+HEAIKYIYTKQ+KEGTSVREHVLDMMMHFNIAEVNGG INE
Subjt:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINE

E2GK51 Gag/pol protein (Fragment)1.1e-6784.31Show/hide
Query:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK
        MN SIVQLLAS+KLNGDNY+ WK NLNTILVV+DLRFVLTEECPQAPA  ANR VREAYDRWVKAN+KARVYI+A+M+DVLAKKH+S+ATAK IMDSL +
Subjt:  MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTK

Query:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN
        MFGQPSWSL+HEAIK+IYTK++KEGTSVREHVLDMMMHFNIAEVNGG I+EAN
Subjt:  MFGQPSWSLKHEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACTCAATAGTACAACTCTTAGCTTCTCAGAAACTTAATGGCGATAATTATACAACTTGGAAACCAAACCTAAATACAATACTAGTAGTAAATGATTTAAGGTT
TGTCTTAACTGAGGAGTGTCCTCAAGCCCCTGCCTCAACTGCTAATCGAAATGTTCGAGAAGCATATGATCGATGGGTTAAGGCCAATGAAAAGGCCCGTGTCTATATTA
TTGCCAACATGTCTGATGTTTTGGCAAAGAAACATGAATCCTTAGCCACGGCTAAAGAGATTATGGATTCATTGACGAAGATGTTTGGTCAGCCTTCATGGTCCCTCAAA
CATGAAGCAATTAAGTACATTTACACCAAGCAAATAAAGGAAGGGACCTCTGTTAGAGAACATGTCCTGGACATGATGATGCACTTTAATATTGCTGAAGTAAATGGTGG
TTCCATCAATGAGGCAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAACTCAATAGTACAACTCTTAGCTTCTCAGAAACTTAATGGCGATAATTATACAACTTGGAAACCAAACCTAAATACAATACTAGTAGTAAATGATTTAAGGTT
TGTCTTAACTGAGGAGTGTCCTCAAGCCCCTGCCTCAACTGCTAATCGAAATGTTCGAGAAGCATATGATCGATGGGTTAAGGCCAATGAAAAGGCCCGTGTCTATATTA
TTGCCAACATGTCTGATGTTTTGGCAAAGAAACATGAATCCTTAGCCACGGCTAAAGAGATTATGGATTCATTGACGAAGATGTTTGGTCAGCCTTCATGGTCCCTCAAA
CATGAAGCAATTAAGTACATTTACACCAAGCAAATAAAGGAAGGGACCTCTGTTAGAGAACATGTCCTGGACATGATGATGCACTTTAATATTGCTGAAGTAAATGGTGG
TTCCATCAATGAGGCAAATTAG
Protein sequenceShow/hide protein sequence
MNNSIVQLLASQKLNGDNYTTWKPNLNTILVVNDLRFVLTEECPQAPASTANRNVREAYDRWVKANEKARVYIIANMSDVLAKKHESLATAKEIMDSLTKMFGQPSWSLK
HEAIKYIYTKQIKEGTSVREHVLDMMMHFNIAEVNGGSINEAN