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Pay0021022 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021022
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionProtein CHROMATIN REMODELING 5 isoform X2
Genome locationchr04:4606948..4615131
RNA-Seq ExpressionPay0021022
SyntenyPay0021022
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR038718 - SNF2-like, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025460.1 carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis melo var. makuwa]3.1e-2091.8Show/hide
Query:  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVI
        +++AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR I VI
Subjt:  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVI

KAA0041555.1 carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis melo var. makuwa]2.6e-1990.16Show/hide
Query:  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVI
        +++AREAAISVQ KSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR I VI
Subjt:  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVI

KAA0061778.1 protein CHROMATIN REMODELING 5 isoform X2 [Cucumis melo var. makuwa]1.7e-1898.11Show/hide
Query:  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN
        +AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN
Subjt:  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN

KAA0067468.1 carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis melo var. makuwa]7.6e-1988.52Show/hide
Query:  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVI
        +++ARE AISVQGKSVDLQ KKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR I VI
Subjt:  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVI

XP_038901513.1 protein CHROMATIN REMODELING 5 isoform X2 [Benincasa hispida]1.7e-1898.11Show/hide
Query:  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN
        +AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN
Subjt:  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN

TrEMBL top hitse value%identityAlignment
A0A5A7SH43 Carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X21.5e-2091.8Show/hide
Query:  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVI
        +++AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR I VI
Subjt:  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVI

A0A5A7STC6 Protein CHROMATIN REMODELING 5 isoform X11.4e-1898.11Show/hide
Query:  AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR
        AREAAIS QGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR
Subjt:  AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR

A0A5A7V2H3 Protein CHROMATIN REMODELING 5 isoform X28.2e-1998.11Show/hide
Query:  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN
        +AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN
Subjt:  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN

A0A5A7VIB0 Carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X23.7e-1988.52Show/hide
Query:  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVI
        +++ARE AISVQGKSVDLQ KKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR I VI
Subjt:  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVI

A0A5D3D8D7 Carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X21.3e-1990.16Show/hide
Query:  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVI
        +++AREAAISVQ KSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR I VI
Subjt:  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVI

SwissProt top hitse value%identityAlignment
F4IV99 Protein CHROMATIN REMODELING 51.8e-1573.21Show/hide
Query:  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFI
        +ARE +I+VQGK V+ QR K K SLRKLDEQPEWL GG LRDYQLEGLNFLVN ++
Subjt:  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFI

Arabidopsis top hitse value%identityAlignment
AT2G13370.1 chromatin remodeling 51.3e-1673.21Show/hide
Query:  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFI
        +ARE +I+VQGK V+ QR K K SLRKLDEQPEWL GG LRDYQLEGLNFLVN ++
Subjt:  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFI

AT3G06010.1 Homeotic gene regulator9.6e-0445.24Show/hide
Query:  KLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVISNIGSRRLG
        K+ EQP  L+GG+LR YQLEGL ++V+ F   ++ I +  +G
Subjt:  KLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVISNIGSRRLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGTCGGCAGCAACCTCCCTTCAGAAAAATGCTTGTCCAGGAAAGATGTCACAAGCTCGTGAAGCTGCAATATCTGTGCAAGGGAAATCAGTTGATCTTCAGCG
GAAAAAGAGTAAAGTGAGTTTAAGGAAACTTGATGAACAACCTGAGTGGTTAAAAGGAGGCAAGCTTCGAGACTATCAGCTTGAGGGTTTGAATTTTCTTGTTAATAGGT
TTATATGTGTGATCTCGAACATCGGTTCTCGGAGATTGGGAGAAGATTTTGAATTAGGATATATTTTAGCTAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGTCGGCAGCAACCTCCCTTCAGAAAAATGCTTGTCCAGGAAAGATGTCACAAGCTCGTGAAGCTGCAATATCTGTGCAAGGGAAATCAGTTGATCTTCAGCG
GAAAAAGAGTAAAGTGAGTTTAAGGAAACTTGATGAACAACCTGAGTGGTTAAAAGGAGGCAAGCTTCGAGACTATCAGCTTGAGGGTTTGAATTTTCTTGTTAATAGGT
TTATATGTGTGATCTCGAACATCGGTTCTCGGAGATTGGGAGAAGATTTTGAATTAGGATATATTTTAGCTAGGTGA
Protein sequenceShow/hide protein sequence
MSMSAATSLQKNACPGKMSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVISNIGSRRLGEDFELGYILAR