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Pay0021062 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021062
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPol polyprotein
Genome locationchr04:23853932..23856010
RNA-Seq ExpressionPay0021062
SyntenyPay0021062
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048414.1 uncharacterized protein E6C27_scaffold264G001400 [Cucumis melo var. makuwa]2.2e-5896.72Show/hide
Query:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV
        MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATA TTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV
Subjt:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV

Query:  WDALQKKYDTEEARSKKYDTLK
        WDALQKKYDTEEARSKKY   K
Subjt:  WDALQKKYDTEEARSKKYDTLK
KAA0055814.1 hypothetical protein E6C27_scaffold181G002040 [Cucumis melo var. makuwa]1.5e-5189.83Show/hide
Query:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV
        MA +IQSDLMSSD NRPFRFEGA+FKRWKQKMLFFLTLKKV TA TTEK KV EKDPTEEQLKNL TWTETDFICKNLILNGLT+ELYDYYSTMTT KEV
Subjt:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV

Query:  WDALQKKYDTEEARSKKY
        WDALQKKYDTEEA SKKY
Subjt:  WDALQKKYDTEEARSKKY
KAA0058200.1 uncharacterized protein E6C27_scaffold274G005210 [Cucumis melo var. makuwa]3.7e-5392.37Show/hide
Query:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV
        MAGQIQSDLMS DLNRPFRFEGAHFKRWKQKMLFFLTLKKVATA TTEK +V EKDPTE+QLKNLATWTETDFICKNLILNGLT+ELYDYYSTMTT KEV
Subjt:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV

Query:  WDALQKKYDTEEARSKKY
        WDALQKKYDTEEA SKKY
Subjt:  WDALQKKYDTEEARSKKY
KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]4.3e-5494.07Show/hide
Query:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV
        MAGQIQSDLMSSDLNR FRFEGAHFKRWKQK+LFFLTLKKVATA TTEK KVSEKDPTEEQLKNLATWTETDFICKNLILNGLT+ELYDYYSTMTT KEV
Subjt:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV

Query:  WDALQKKYDTEEARSKKY
        WDALQKKYDTEEA SKKY
Subjt:  WDALQKKYDTEEARSKKY
KAA0065374.1 uncharacterized protein E6C27_scaffold17G00360 [Cucumis melo var. makuwa]2.3e-5594.92Show/hide
Query:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV
        M GQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATA TTEKLKVSEKDP EEQLKNLATWTETDFICKNLILNGLT+ELYDYYSTMTT KEV
Subjt:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV

Query:  WDALQKKYDTEEARSKKY
        WDALQKKYDT+EARSKKY
Subjt:  WDALQKKYDTEEARSKKY
TrEMBL top hitse value%identityAlignment
A0A5A7USR3 Uncharacterized protein1.8e-5392.37Show/hide
Query:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV
        MAGQIQSDLMS DLNRPFRFEGAHFKRWKQKMLFFLTLKKVATA TTEK +V EKDPTE+QLKNLATWTETDFICKNLILNGLT+ELYDYYSTMTT KEV
Subjt:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV

Query:  WDALQKKYDTEEARSKKY
        WDALQKKYDTEEA SKKY
Subjt:  WDALQKKYDTEEARSKKY
A0A5A7UYY4 Uncharacterized protein2.1e-5494.07Show/hide
Query:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV
        MAGQIQSDLMSSDLNR FRFEGAHFKRWKQK+LFFLTLKKVATA TTEK KVSEKDPTEEQLKNLATWTETDFICKNLILNGLT+ELYDYYSTMTT KEV
Subjt:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV

Query:  WDALQKKYDTEEARSKKY
        WDALQKKYDTEEA SKKY
Subjt:  WDALQKKYDTEEARSKKY
A0A5D3BEH3 Uncharacterized protein1.1e-5896.72Show/hide
Query:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV
        MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATA TTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV
Subjt:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV

Query:  WDALQKKYDTEEARSKKYDTLK
        WDALQKKYDTEEARSKKY   K
Subjt:  WDALQKKYDTEEARSKKYDTLK
A0A5D3CEV3 Uncharacterized protein7.5e-5289.83Show/hide
Query:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV
        MA +IQSDLMSSD NRPFRFEGA+FKRWKQKMLFFLTLKKV TA TTEK KV EKDPTEEQLKNL TWTETDFICKNLILNGLT+ELYDYYSTMTT KEV
Subjt:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV

Query:  WDALQKKYDTEEARSKKY
        WDALQKKYDTEEA SKKY
Subjt:  WDALQKKYDTEEARSKKY
A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein1.1e-5594.92Show/hide
Query:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV
        M GQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATA TTEKLKVSEKDP EEQLKNLATWTETDFICKNLILNGLT+ELYDYYSTMTT KEV
Subjt:  MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEV

Query:  WDALQKKYDTEEARSKKY
        WDALQKKYDT+EARSKKY
Subjt:  WDALQKKYDTEEARSKKY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00980.1 zinc knuckle (CCHC-type) family protein1.2e-0424.35Show/hide
Query:  RFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLA-------TWTETDFICKNLILNGLTNELYDYYS-TMTTTKEVWDALQKKYDT
        RF+G  +  W  +M  FL   K+    +     +      E   + +         W   D++C   ++N L++ LY  YS      KE+WD L+  Y  
Subjt:  RFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLA-------TWTETDFICKNLILNGLTNELYDYYS-TMTTTKEVWDALQKKYDT

Query:  EEARSKKYDTLKIVK
        +E++SK+    K ++
Subjt:  EEARSKKYDTLKIVK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGACAAATCCAATCCGACTTGATGTCTTCTGATCTCAACCGTCCATTCCGTTTTGAAGGAGCACACTTCAAAAGGTGGAAACAAAAGATGTTATTTTTCCTCAC
GCTGAAGAAGGTGGCCACTGCTTATACTACTGAAAAGCTGAAGGTTTCAGAAAAAGATCCTACAGAAGAACAACTAAAGAACCTCGCCACCTGGACAGAAACTGACTTCA
TCTGTAAGAACCTAATTCTTAATGGTCTTACTAATGAACTATATGATTATTATAGTACCATGACTACTACAAAAGAAGTGTGGGATGCGCTACAAAAGAAGTACGATACT
GAGGAAGCGAGATCGAAGAAGTACGATACGCTGAAAATAGTAAAGCCTATAGATTCTATGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGACAAATCCAATCCGACTTGATGTCTTCTGATCTCAACCGTCCATTCCGTTTTGAAGGAGCACACTTCAAAAGGTGGAAACAAAAGATGTTATTTTTCCTCAC
GCTGAAGAAGGTGGCCACTGCTTATACTACTGAAAAGCTGAAGGTTTCAGAAAAAGATCCTACAGAAGAACAACTAAAGAACCTCGCCACCTGGACAGAAACTGACTTCA
TCTGTAAGAACCTAATTCTTAATGGTCTTACTAATGAACTATATGATTATTATAGTACCATGACTACTACAAAAGAAGTGTGGGATGCGCTACAAAAGAAGTACGATACT
GAGGAAGCGAGATCGAAGAAGTACGATACGCTGAAAATAGTAAAGCCTATAGATTCTATGACTTAG
Protein sequenceShow/hide protein sequence
MAGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATAYTTEKLKVSEKDPTEEQLKNLATWTETDFICKNLILNGLTNELYDYYSTMTTTKEVWDALQKKYDT
EEARSKKYDTLKIVKPIDSMT