; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0021064 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021064
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr08:26666070..26667044
RNA-Seq ExpressionPay0021064
SyntenyPay0021064
Gene Ontology termsGO:0008380 - RNA splicing (biological process)
GO:1900865 - chloroplast RNA modification (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065562.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.3e-15496.15Show/hide
Query:  NGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKD
        NGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKD
Subjt:  NGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKD

Query:  VITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVF
        VITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVF
Subjt:  VITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVF

Query:  QHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQHGLMPLKRPLYMYG
        QHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQH  M ++    ++G
Subjt:  QHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQHGLMPLKRPLYMYG

XP_004149135.2 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600 [Cucumis sativus]8.3e-15789.27Show/hide
Query:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF
        MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEV LASVVSACATISAIKE                    GNALLDMYAKCNR+NEARIIF
Subjt:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF

Query:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV
        DMMPIR+VVSETSMVSGY KASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLK ESV PTHYTFGNLLNACANLADLQLGRQAHSHV
Subjt:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV

Query:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG
        LKHGFRFQYGEDSDVFVG  LIDMYMKCGSVENGCRVFQHMLE+DCVSWNAMIVGYAQNGFGNKALEVF KMLESGE PDHVTMIGVL   SHAGLLDEG
Subjt:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG

Query:  RYYFRSMTAQHGLMPLK
        RYYFRSMTAQHGLMPLK
Subjt:  RYYFRSMTAQHGLMPLK

XP_008464730.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600 isoform X1 [Cucumis melo]4.4e-15889.91Show/hide
Query:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF
        MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMI+CGVEPDEV LASVVSACATISAIKE                    GNALLDMYAKCNR+NEARIIF
Subjt:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF

Query:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV
        DMMPIR+VVSETSMVSGY KASKVKVAR MFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRES+ PTHYTFGNLLNACANLADLQLGRQAHSHV
Subjt:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV

Query:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG
        LKHGFRFQYGEDSDVFVG  LIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLS  SHAGLLDEG
Subjt:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG

Query:  RYYFRSMTAQHGLMPLK
        RYYFRSMTAQHGLMPLK
Subjt:  RYYFRSMTAQHGLMPLK

XP_031742312.1 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis sativus]1.7e-15789.59Show/hide
Query:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF
        MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEV LASVVSACATISAIKE                    GNALLDMYAKCNR+NEARIIF
Subjt:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF

Query:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV
        DMMPIR+VVSETSMVSGY KASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESV PTHYTFGNLLNACANLADLQLGRQAHSHV
Subjt:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV

Query:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG
        LKHGFRFQYGEDSDVFVG  LIDMYMKCGSVENGCRVFQHMLE+DCVSWNAMIVGYAQNGFGNKALEVF KMLESGE PDHVTMIGVL   SHAGLLDEG
Subjt:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG

Query:  RYYFRSMTAQHGLMPLK
        RYYFRSMTAQHGLMPLK
Subjt:  RYYFRSMTAQHGLMPLK

XP_038891428.1 pentatricopeptide repeat-containing protein At2g13600-like [Benincasa hispida]3.8e-15487.07Show/hide
Query:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF
        MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMI+CGVEPDEV LASVVSACATISAIKE                    GNALLDMYAKCNR++EARI+F
Subjt:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF

Query:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV
        D+MPIR+VVSETSMVSGY KAS+VKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESV PTHYTFGNLLNACANLADLQLGRQAHSHV
Subjt:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV

Query:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG
        LKHGFRF+YGE+SDVFVG  LIDMYMKCGSVENGCRVF+HMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGE PDHVTMIGVL   SHAGLLDEG
Subjt:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG

Query:  RYYFRSMTAQHGLMPLK
        RYYFRSM+AQHGL+PLK
Subjt:  RYYFRSMTAQHGLMPLK

TrEMBL top hitse value%identityAlignment
A0A0A0KJ63 Uncharacterized protein8.1e-15889.59Show/hide
Query:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF
        MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEV LASVVSACATISAIKE                    GNALLDMYAKCNR+NEARIIF
Subjt:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF

Query:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV
        DMMPIR+VVSETSMVSGY KASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESV PTHYTFGNLLNACANLADLQLGRQAHSHV
Subjt:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV

Query:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG
        LKHGFRFQYGEDSDVFVG  LIDMYMKCGSVENGCRVFQHMLE+DCVSWNAMIVGYAQNGFGNKALEVF KMLESGE PDHVTMIGVL   SHAGLLDEG
Subjt:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG

Query:  RYYFRSMTAQHGLMPLK
        RYYFRSMTAQHGLMPLK
Subjt:  RYYFRSMTAQHGLMPLK

A0A1S3CNR0 pentatricopeptide repeat-containing protein At2g13600 isoform X12.1e-15889.91Show/hide
Query:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF
        MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMI+CGVEPDEV LASVVSACATISAIKE                    GNALLDMYAKCNR+NEARIIF
Subjt:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF

Query:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV
        DMMPIR+VVSETSMVSGY KASKVKVAR MFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRES+ PTHYTFGNLLNACANLADLQLGRQAHSHV
Subjt:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV

Query:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG
        LKHGFRFQYGEDSDVFVG  LIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLS  SHAGLLDEG
Subjt:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG

Query:  RYYFRSMTAQHGLMPLK
        RYYFRSMTAQHGLMPLK
Subjt:  RYYFRSMTAQHGLMPLK

A0A5A7VB90 Pentatricopeptide repeat-containing protein1.1e-15496.15Show/hide
Query:  NGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKD
        NGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKD
Subjt:  NGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKD

Query:  VITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVF
        VITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVF
Subjt:  VITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVF

Query:  QHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQHGLMPLKRPLYMYG
        QHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQH  M ++    ++G
Subjt:  QHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQHGLMPLKRPLYMYG

A0A5A7VCZ2 Pentatricopeptide repeat-containing protein2.1e-15889.91Show/hide
Query:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF
        MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMI+CGVEPDEV LASVVSACATISAIKE                    GNALLDMYAKCNR+NEARIIF
Subjt:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKE--------------------GNALLDMYAKCNRLNEARIIF

Query:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV
        DMMPIR+VVSETSMVSGY KASKVKVAR MFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRES+ PTHYTFGNLLNACANLADLQLGRQAHSHV
Subjt:  DMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHV

Query:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG
        LKHGFRFQYGEDSDVFVG  LIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLS  SHAGLLDEG
Subjt:  LKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEG

Query:  RYYFRSMTAQHGLMPLK
        RYYFRSMTAQHGLMPLK
Subjt:  RYYFRSMTAQHGLMPLK

A0A5D3DZF5 Pentatricopeptide repeat-containing protein4.2e-15495.8Show/hide
Query:  NGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKD
        NGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKD
Subjt:  NGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKD

Query:  VITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVF
        VITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVF
Subjt:  VITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVF

Query:  QHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQHGLMPLKRPLYMYG
        QHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLST SHAGLLDEGRYYFRSMTAQH  M ++    ++G
Subjt:  QHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQHGLMPLKRPLYMYG

SwissProt top hitse value%identityAlignment
P93005 Pentatricopeptide repeat-containing protein At2g336801.7e-5639.38Show/hide
Query:  RSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASK
        R+ ++W++++T Y QNG   EA+K+F  M   G++P E  +  V++AC+ I  ++EG  L     K          F+    R + + T++V  Y KA  
Subjt:  RSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASK

Query:  VKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLID
        +  AR  F  +  +DV  W +LI+G  QN +NEEALIL+R +K   + P   T  ++L AC++LA L+LG+Q H H +KHGF        +V +G  L  
Subjt:  VKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLID

Query:  MYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQHGLMP
        MY KCGS+E+G  VF+    +D VSWNAMI G + NG G++ALE+F +ML  G  PD VT + ++S  SH G ++ G +YF  M+ Q GL P
Subjt:  MYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQHGLMP

Q9FRI5 Pentatricopeptide repeat-containing protein At1g253607.3e-5537.46Show/hide
Query:  VSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG------------------NALLDMYAKCNRLNEARIIFDMMPIRTV
        V++N++I+ Y   G   EAL++   M+  G+E DE    SV+ ACAT   ++ G                  N+L+ +Y KC + +EAR IF+ MP + +
Subjt:  VSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG------------------NALLDMYAKCNRLNEARIIFDMMPIRTV

Query:  VSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQ
        VS  +++SGY  +  +  A+ +F  M  K++++W  +I+G  +NG  EE L LF  +KRE   P  Y F   + +CA L     G+Q H+ +LK GF   
Subjt:  VSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQ

Query:  YGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMT
           DS +  G  LI MY KCG VE   +VF+ M   D VSWNA+I    Q+G G +A++V+ +ML+ G  PD +T++ VL+  SHAGL+D+GR YF SM 
Subjt:  YGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMT

Query:  AQHGLMP
          + + P
Subjt:  AQHGLMP

Q9SIT7 Pentatricopeptide repeat-containing protein At2g136002.0e-11363.38Show/hide
Query:  RSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG--------------------NALLDMYAKCNRLNEARIIFDMM
        R+ VSWNSLITC+EQNGP  EAL +F  M++  VEPDEV LASV+SACA++SAIK G                    NA +DMYAKC+R+ EAR IFD M
Subjt:  RSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG--------------------NALLDMYAKCNRLNEARIIFDMM

Query:  PIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKH
        PIR V++ETSM+SGY  A+  K AR MF+ M  ++V++WNALIAG TQNGENEEAL LF LLKRESV PTHY+F N+L ACA+LA+L LG QAH HVLKH
Subjt:  PIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKH

Query:  GFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYY
        GF+FQ GE+ D+FVG  LIDMY+KCG VE G  VF+ M+ERDCVSWNAMI+G+AQNG+GN+ALE+F +MLESGE PDH+TMIGVLS   HAG ++EGR+Y
Subjt:  GFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYY

Query:  FRSMTAQHGLMPLK
        F SMT   G+ PL+
Subjt:  FRSMTAQHGLMPLK

Q9SJZ3 Pentatricopeptide repeat-containing protein At2g22410, mitochondrial2.0e-5234.62Show/hide
Query:  VRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG-------------------NALLDMYAKCNRLNEARIIFDMM
        VR  VSWN LI  Y++ G  ++A+ ++  M   GV+PD+V +  +VS+C+ +  +  G                   NAL+DM++KC  ++EAR IFD +
Subjt:  VRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG-------------------NALLDMYAKCNRLNEARIIFDMM

Query:  PIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKH
          RT+VS T+M+SGY +   + V+R +F +M  KDV+ WNA+I G  Q    ++AL LF+ ++  +  P   T  + L+AC+ L  L +G   H ++ K 
Subjt:  PIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKH

Query:  GFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYY
             Y    +V +G  L+DMY KCG++     VF  +  R+ +++ A+I G A +G  + A+  F++M+++G  PD +T IG+LS   H G++  GR Y
Subjt:  GFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYY

Query:  FRSMTAQHGLMP
        F  M ++  L P
Subjt:  FRSMTAQHGLMP

Q9SY02 Pentatricopeptide repeat-containing protein At4g027502.5e-5537.74Show/hide
Query:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG---------------NALLDMYAKCNRLNEARIIFDMMPI
        M VR  VSWN++IT Y Q+G +DEA ++F E        D     ++VS       ++E                NA+L  Y +  R+  A+ +FD+MP 
Subjt:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG---------------NALLDMYAKCNRLNEARIIFDMMPI

Query:  RTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGF
        R V +  +M++GY +  K+  A+ +F  M  +D ++W A+IAG +Q+G + EAL LF  ++RE       +F + L+ CA++  L+LG+Q H  ++K G+
Subjt:  RTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGF

Query:  RFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFR
              ++  FVG  L+ MY KCGS+E    +F+ M  +D VSWN MI GY+++GFG  AL  F  M   G  PD  TM+ VLS  SH GL+D+GR YF 
Subjt:  RFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFR

Query:  SMTAQHGLMP
        +MT  +G+MP
Subjt:  SMTAQHGLMP

Arabidopsis top hitse value%identityAlignment
AT1G25360.1 Pentatricopeptide repeat (PPR) superfamily protein5.2e-5637.46Show/hide
Query:  VSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG------------------NALLDMYAKCNRLNEARIIFDMMPIRTV
        V++N++I+ Y   G   EAL++   M+  G+E DE    SV+ ACAT   ++ G                  N+L+ +Y KC + +EAR IF+ MP + +
Subjt:  VSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG------------------NALLDMYAKCNRLNEARIIFDMMPIRTV

Query:  VSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQ
        VS  +++SGY  +  +  A+ +F  M  K++++W  +I+G  +NG  EE L LF  +KRE   P  Y F   + +CA L     G+Q H+ +LK GF   
Subjt:  VSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQ

Query:  YGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMT
           DS +  G  LI MY KCG VE   +VF+ M   D VSWNA+I    Q+G G +A++V+ +ML+ G  PD +T++ VL+  SHAGL+D+GR YF SM 
Subjt:  YGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMT

Query:  AQHGLMP
          + + P
Subjt:  AQHGLMP

AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-11463.38Show/hide
Query:  RSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG--------------------NALLDMYAKCNRLNEARIIFDMM
        R+ VSWNSLITC+EQNGP  EAL +F  M++  VEPDEV LASV+SACA++SAIK G                    NA +DMYAKC+R+ EAR IFD M
Subjt:  RSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG--------------------NALLDMYAKCNRLNEARIIFDMM

Query:  PIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKH
        PIR V++ETSM+SGY  A+  K AR MF+ M  ++V++WNALIAG TQNGENEEAL LF LLKRESV PTHY+F N+L ACA+LA+L LG QAH HVLKH
Subjt:  PIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKH

Query:  GFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYY
        GF+FQ GE+ D+FVG  LIDMY+KCG VE G  VF+ M+ERDCVSWNAMI+G+AQNG+GN+ALE+F +MLESGE PDH+TMIGVLS   HAG ++EGR+Y
Subjt:  GFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYY

Query:  FRSMTAQHGLMPLK
        F SMT   G+ PL+
Subjt:  FRSMTAQHGLMPLK

AT2G22410.1 SLOW GROWTH 11.4e-5334.62Show/hide
Query:  VRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG-------------------NALLDMYAKCNRLNEARIIFDMM
        VR  VSWN LI  Y++ G  ++A+ ++  M   GV+PD+V +  +VS+C+ +  +  G                   NAL+DM++KC  ++EAR IFD +
Subjt:  VRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG-------------------NALLDMYAKCNRLNEARIIFDMM

Query:  PIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKH
          RT+VS T+M+SGY +   + V+R +F +M  KDV+ WNA+I G  Q    ++AL LF+ ++  +  P   T  + L+AC+ L  L +G   H ++ K 
Subjt:  PIRTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKH

Query:  GFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYY
             Y    +V +G  L+DMY KCG++     VF  +  R+ +++ A+I G A +G  + A+  F++M+++G  PD +T IG+LS   H G++  GR Y
Subjt:  GFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYY

Query:  FRSMTAQHGLMP
        F  M ++  L P
Subjt:  FRSMTAQHGLMP

AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-5739.38Show/hide
Query:  RSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASK
        R+ ++W++++T Y QNG   EA+K+F  M   G++P E  +  V++AC+ I  ++EG  L     K          F+    R + + T++V  Y KA  
Subjt:  RSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASK

Query:  VKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLID
        +  AR  F  +  +DV  W +LI+G  QN +NEEALIL+R +K   + P   T  ++L AC++LA L+LG+Q H H +KHGF        +V +G  L  
Subjt:  VKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLID

Query:  MYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQHGLMP
        MY KCGS+E+G  VF+    +D VSWNAMI G + NG G++ALE+F +ML  G  PD VT + ++S  SH G ++ G +YF  M+ Q GL P
Subjt:  MYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQHGLMP

AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.8e-5637.74Show/hide
Query:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG---------------NALLDMYAKCNRLNEARIIFDMMPI
        M VR  VSWN++IT Y Q+G +DEA ++F E        D     ++VS       ++E                NA+L  Y +  R+  A+ +FD+MP 
Subjt:  MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEG---------------NALLDMYAKCNRLNEARIIFDMMPI

Query:  RTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGF
        R V +  +M++GY +  K+  A+ +F  M  +D ++W A+IAG +Q+G + EAL LF  ++RE       +F + L+ CA++  L+LG+Q H  ++K G+
Subjt:  RTVVSETSMVSGYGKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGF

Query:  RFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFR
              ++  FVG  L+ MY KCGS+E    +F+ M  +D VSWN MI GY+++GFG  AL  F  M   G  PD  TM+ VLS  SH GL+D+GR YF 
Subjt:  RFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFR

Query:  SMTAQHGLMP
        +MT  +G+MP
Subjt:  SMTAQHGLMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTGAGAAGTAGAGTTTCTTGGAATAGCTTGATTACCTGTTATGAACAGAATGGTCCAGTTGACGAGGCTCTCAAGATTTTTGTTGAGATGATCAAATGTGGGGT
TGAACCTGACGAGGTAATGCTTGCAAGTGTTGTTAGTGCATGTGCAACTATCTCGGCAATCAAAGAAGGAAATGCGTTGCTTGATATGTATGCTAAATGTAATAGGCTTA
ATGAGGCTAGAATAATTTTCGATATGATGCCAATTAGGACTGTGGTGTCTGAGACCTCAATGGTAAGTGGGTATGGAAAGGCTTCCAAAGTTAAAGTTGCAAGATATATG
TTCTCAAATATGATGGTGAAAGACGTAATCACTTGGAATGCGCTTATTGCAGGGTGTACTCAAAATGGAGAGAATGAAGAGGCACTTATACTCTTTCGTTTATTGAAAAG
AGAGTCTGTTTCGCCTACGCACTACACATTTGGCAATCTCCTCAATGCTTGTGCAAATCTTGCTGATTTGCAGCTCGGCCGACAGGCTCACTCTCATGTTTTAAAGCATG
GATTTAGATTCCAATATGGAGAAGATTCAGATGTTTTTGTTGGCAAGTTTTTAATAGATATGTATATGAAATGTGGATCAGTTGAGAATGGTTGTAGGGTGTTTCAACAT
ATGTTGGAAAGGGATTGTGTGTCATGGAATGCTATGATAGTTGGATATGCACAAAATGGTTTTGGCAATAAGGCTCTCGAAGTTTTCAGTAAAATGTTAGAATCAGGAGA
GGGACCAGATCATGTAACAATGATTGGTGTTCTTTCCACTTCTAGTCATGCCGGACTACTTGACGAAGGTCGCTATTACTTTCGGTCAATGACTGCACAACATGGTTTGA
TGCCATTAAAAAGACCATTATACATGTATGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGTGAGAAGTAGAGTTTCTTGGAATAGCTTGATTACCTGTTATGAACAGAATGGTCCAGTTGACGAGGCTCTCAAGATTTTTGTTGAGATGATCAAATGTGGGGT
TGAACCTGACGAGGTAATGCTTGCAAGTGTTGTTAGTGCATGTGCAACTATCTCGGCAATCAAAGAAGGAAATGCGTTGCTTGATATGTATGCTAAATGTAATAGGCTTA
ATGAGGCTAGAATAATTTTCGATATGATGCCAATTAGGACTGTGGTGTCTGAGACCTCAATGGTAAGTGGGTATGGAAAGGCTTCCAAAGTTAAAGTTGCAAGATATATG
TTCTCAAATATGATGGTGAAAGACGTAATCACTTGGAATGCGCTTATTGCAGGGTGTACTCAAAATGGAGAGAATGAAGAGGCACTTATACTCTTTCGTTTATTGAAAAG
AGAGTCTGTTTCGCCTACGCACTACACATTTGGCAATCTCCTCAATGCTTGTGCAAATCTTGCTGATTTGCAGCTCGGCCGACAGGCTCACTCTCATGTTTTAAAGCATG
GATTTAGATTCCAATATGGAGAAGATTCAGATGTTTTTGTTGGCAAGTTTTTAATAGATATGTATATGAAATGTGGATCAGTTGAGAATGGTTGTAGGGTGTTTCAACAT
ATGTTGGAAAGGGATTGTGTGTCATGGAATGCTATGATAGTTGGATATGCACAAAATGGTTTTGGCAATAAGGCTCTCGAAGTTTTCAGTAAAATGTTAGAATCAGGAGA
GGGACCAGATCATGTAACAATGATTGGTGTTCTTTCCACTTCTAGTCATGCCGGACTACTTGACGAAGGTCGCTATTACTTTCGGTCAATGACTGCACAACATGGTTTGA
TGCCATTAAAAAGACCATTATACATGTATGGTTGA
Protein sequenceShow/hide protein sequence
MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVMLASVVSACATISAIKEGNALLDMYAKCNRLNEARIIFDMMPIRTVVSETSMVSGYGKASKVKVARYM
FSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVSPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGKFLIDMYMKCGSVENGCRVFQH
MLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEGPDHVTMIGVLSTSSHAGLLDEGRYYFRSMTAQHGLMPLKRPLYMYG