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Pay0021074 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021074
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr04:26076979..26077966
RNA-Seq ExpressionPay0021074
SyntenyPay0021074
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004518 - nuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]1.4e-8761.18Show/hide
Query:  MYGIERLKKLGATVFEGFTDPANTE---------------------------------------IGRRSEA----------------------YLRKSII
        MYGIERLKKLGATVFEG TDPA+ E                                       I RR++A                        ++   
Subjt:  MYGIERLKKLGATVFEGFTDPANTE---------------------------------------IGRRSEA----------------------YLRKSII

Query:  PPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS----------
          LKQ SLSV +YER YTELSRYAEMIVASESDRC RFERGLRFEIRTPVTAIAKW NFSQLVETALRV+QSIVEEKS MELSRGVSTTS          
Subjt:  PPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS----------

Query:  ----------DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPC--------------------CGQTGHFKRDCPQLRV
                  DFKRRS GKPLRQMSSGSAYQRQS+RASSQ ANSVARSRTGQESVASES+RTPC                    CG+TGHFKRDCPQLRV
Subjt:  ----------DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPC--------------------CGQTGHFKRDCPQLRV

Query:  AVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
         VRRDQGVESHTVEQ RISTAAGE TSGARQKGVVGRPRQ
Subjt:  AVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ

KAA0057197.1 gag/pol protein [Cucumis melo var. makuwa]5.8e-10581.25Show/hide
Query:  MYGIERLKKLGATVFEGFTDPANTEI-----------------------GRRSEAY-------LRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASE
        MYGIERLKKLGATVFEGFTDPANTE+                       G   E Y        ++     LKQGSLSVVEYER YTELSRYAEMIVASE
Subjt:  MYGIERLKKLGATVFEGFTDPANTEI-----------------------GRRSEAY-------LRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASE

Query:  SDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS---DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARS
        SDRCRRFERGLRFEIRTP+TAIAKW NFSQLVETALRVEQSIVEEKSTMELSRGVSTTS   DFK RS GKPLRQMSSGSAYQRQSQRASSQSANSVARS
Subjt:  SDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS---DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARS

Query:  RTGQESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
        RTGQESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
Subjt:  RTGQESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]1.4e-8761.18Show/hide
Query:  MYGIERLKKLGATVFEGFTDPANTE---------------------------------------IGRRSEA----------------------YLRKSII
        MYGIERLKKLGATVFEG TDPA+ E                                       I RR++A                        ++   
Subjt:  MYGIERLKKLGATVFEGFTDPANTE---------------------------------------IGRRSEA----------------------YLRKSII

Query:  PPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS----------
          LKQ SLSV +YER YTELSRYAEMIVASESDRC RFERGLRFEIRTPVTAIAKW NFSQLVETALRV+QSIVEEKS MELSRGVSTTS          
Subjt:  PPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS----------

Query:  ----------DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPC--------------------CGQTGHFKRDCPQLRV
                  DFKRRS GKPLRQMSSGSAYQRQS+RASSQ ANSVARSRTGQESVASES+RTPC                    CG+TGHFKRDCPQLRV
Subjt:  ----------DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPC--------------------CGQTGHFKRDCPQLRV

Query:  AVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
         VRRDQGVESHTVEQ RISTAAGE TSGARQKGVVGRPRQ
Subjt:  AVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ

TYK18765.1 gag/pol protein [Cucumis melo var. makuwa]6.4e-9676.95Show/hide
Query:  MYGIERLKKLGATVFEGFTDPANTEI-----------------------GRRSEAY-------LRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASE
        MYGIERLKKLGATVFEGFTDPANTE+                       G   E Y        ++     LKQGSLSVVEYER YTELSRYAEMIVASE
Subjt:  MYGIERLKKLGATVFEGFTDPANTEI-----------------------GRRSEAY-------LRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASE

Query:  SDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTSDFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTG
        SDRCRRFERGLRFEIRTP+TAIAKW NFSQLVETALRVEQSIVEEKSTMELSRGVSTT                SGSAYQRQSQRASSQSANSVARSRTG
Subjt:  SDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTSDFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTG

Query:  QESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
        QESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
Subjt:  QESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ

XP_008464978.1 PREDICTED: uncharacterized protein LOC103502718 [Cucumis melo]6.2e-10788.05Show/hide
Query:  MYGIERLKKLGATVFEGFTDPANTEI--GRRSEAY-------LRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTA
        MYGIERLKKLGATVFEGFTDPANTE   G   E Y        ++     LKQGSLSVVEYER YTELSRYAEMIVASESDRCRRFERGLRFEIRTP+TA
Subjt:  MYGIERLKKLGATVFEGFTDPANTEI--GRRSEAY-------LRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTA

Query:  IAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS---DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPCCGQTG
        IAKW NFSQLVETALRVEQSIVEEKSTMELSRGVSTTS   DFK RS GKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPCCGQTG
Subjt:  IAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS---DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPCCGQTG

Query:  HFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
        HFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
Subjt:  HFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ

TrEMBL top hitse value%identityAlignment
A0A1S3CMU0 uncharacterized protein LOC1035027183.0e-10788.05Show/hide
Query:  MYGIERLKKLGATVFEGFTDPANTEI--GRRSEAY-------LRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTA
        MYGIERLKKLGATVFEGFTDPANTE   G   E Y        ++     LKQGSLSVVEYER YTELSRYAEMIVASESDRCRRFERGLRFEIRTP+TA
Subjt:  MYGIERLKKLGATVFEGFTDPANTEI--GRRSEAY-------LRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTA

Query:  IAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS---DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPCCGQTG
        IAKW NFSQLVETALRVEQSIVEEKSTMELSRGVSTTS   DFK RS GKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPCCGQTG
Subjt:  IAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS---DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPCCGQTG

Query:  HFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
        HFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
Subjt:  HFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ

A0A5A7T7M6 Reverse transcriptase6.9e-8861.18Show/hide
Query:  MYGIERLKKLGATVFEGFTDPANTE---------------------------------------IGRRSEA----------------------YLRKSII
        MYGIERLKKLGATVFEG TDPA+ E                                       I RR++A                        ++   
Subjt:  MYGIERLKKLGATVFEGFTDPANTE---------------------------------------IGRRSEA----------------------YLRKSII

Query:  PPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS----------
          LKQ SLSV +YER YTELSRYAEMIVASESDRC RFERGLRFEIRTPVTAIAKW NFSQLVETALRV+QSIVEEKS MELSRGVSTTS          
Subjt:  PPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS----------

Query:  ----------DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPC--------------------CGQTGHFKRDCPQLRV
                  DFKRRS GKPLRQMSSGSAYQRQS+RASSQ ANSVARSRTGQESVASES+RTPC                    CG+TGHFKRDCPQLRV
Subjt:  ----------DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPC--------------------CGQTGHFKRDCPQLRV

Query:  AVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
         VRRDQGVESHTVEQ RISTAAGE TSGARQKGVVGRPRQ
Subjt:  AVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ

A0A5A7URC7 Gag/pol protein2.8e-10581.25Show/hide
Query:  MYGIERLKKLGATVFEGFTDPANTEI-----------------------GRRSEAY-------LRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASE
        MYGIERLKKLGATVFEGFTDPANTE+                       G   E Y        ++     LKQGSLSVVEYER YTELSRYAEMIVASE
Subjt:  MYGIERLKKLGATVFEGFTDPANTEI-----------------------GRRSEAY-------LRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASE

Query:  SDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS---DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARS
        SDRCRRFERGLRFEIRTP+TAIAKW NFSQLVETALRVEQSIVEEKSTMELSRGVSTTS   DFK RS GKPLRQMSSGSAYQRQSQRASSQSANSVARS
Subjt:  SDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS---DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARS

Query:  RTGQESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
        RTGQESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
Subjt:  RTGQESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ

A0A5D3BTP3 Reverse transcriptase6.9e-8861.18Show/hide
Query:  MYGIERLKKLGATVFEGFTDPANTE---------------------------------------IGRRSEA----------------------YLRKSII
        MYGIERLKKLGATVFEG TDPA+ E                                       I RR++A                        ++   
Subjt:  MYGIERLKKLGATVFEGFTDPANTE---------------------------------------IGRRSEA----------------------YLRKSII

Query:  PPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS----------
          LKQ SLSV +YER YTELSRYAEMIVASESDRC RFERGLRFEIRTPVTAIAKW NFSQLVETALRV+QSIVEEKS MELSRGVSTTS          
Subjt:  PPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTS----------

Query:  ----------DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPC--------------------CGQTGHFKRDCPQLRV
                  DFKRRS GKPLRQMSSGSAYQRQS+RASSQ ANSVARSRTGQESVASES+RTPC                    CG+TGHFKRDCPQLRV
Subjt:  ----------DFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPC--------------------CGQTGHFKRDCPQLRV

Query:  AVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
         VRRDQGVESHTVEQ RISTAAGE TSGARQKGVVGRPRQ
Subjt:  AVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ

A0A5D3D5E2 Gag/pol protein3.1e-9676.95Show/hide
Query:  MYGIERLKKLGATVFEGFTDPANTEI-----------------------GRRSEAY-------LRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASE
        MYGIERLKKLGATVFEGFTDPANTE+                       G   E Y        ++     LKQGSLSVVEYER YTELSRYAEMIVASE
Subjt:  MYGIERLKKLGATVFEGFTDPANTEI-----------------------GRRSEAY-------LRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASE

Query:  SDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTSDFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTG
        SDRCRRFERGLRFEIRTP+TAIAKW NFSQLVETALRVEQSIVEEKSTMELSRGVSTT                SGSAYQRQSQRASSQSANSVARSRTG
Subjt:  SDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSTMELSRGVSTTSDFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTG

Query:  QESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
        QESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ
Subjt:  QESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTAAGEGTSGARQKGVVGRPRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGGATTGAACGGTTGAAGAAATTAGGAGCCACAGTGTTTGAGGGTTTTACGGATCCAGCTAACACCGAGATTGGCAGACGTTCAGAGGCATATTTGAGGAAAAG
TATTATCCCACCACTGAAACAAGGGTCACTTTCAGTGGTCGAGTACGAGAGGAACTATACCGAGCTTTCACGGTATGCTGAAATGATTGTGGCATCTGAGAGTGACAGGT
GTCGCAGGTTTGAGAGAGGGCTACGTTTTGAGATACGTACCCCAGTGACCGCTATTGCCAAGTGGACGAATTTTTCCCAGCTAGTAGAGACGGCTTTACGTGTGGAGCAG
AGTATTGTTGAGGAAAAGTCGACAATGGAGCTTAGTCGAGGAGTTTCAACAACTAGTGACTTCAAGCGTCGATCGAGTGGCAAACCATTGAGGCAGATGAGTTCAGGTAG
TGCTTATCAGAGGCAGAGTCAGAGAGCTTCCAGTCAGTCTGCGAACTCGGTAGCAAGATCGCGGACGGGTCAGGAGTCTGTTGCTAGTGAATCCAGGAGAACCCCATGTT
GTGGACAAACAGGACATTTCAAGAGGGATTGTCCACAGCTGAGAGTAGCAGTTCGGAGGGACCAGGGAGTTGAGTCCCACACAGTTGAGCAGCCGAGAATCTCAACAGCC
GCAGGGGAGGGAACTAGTGGTGCAAGACAAAAGGGAGTTGTGGGGAGACCTAGGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATGGGATTGAACGGTTGAAGAAATTAGGAGCCACAGTGTTTGAGGGTTTTACGGATCCAGCTAACACCGAGATTGGCAGACGTTCAGAGGCATATTTGAGGAAAAG
TATTATCCCACCACTGAAACAAGGGTCACTTTCAGTGGTCGAGTACGAGAGGAACTATACCGAGCTTTCACGGTATGCTGAAATGATTGTGGCATCTGAGAGTGACAGGT
GTCGCAGGTTTGAGAGAGGGCTACGTTTTGAGATACGTACCCCAGTGACCGCTATTGCCAAGTGGACGAATTTTTCCCAGCTAGTAGAGACGGCTTTACGTGTGGAGCAG
AGTATTGTTGAGGAAAAGTCGACAATGGAGCTTAGTCGAGGAGTTTCAACAACTAGTGACTTCAAGCGTCGATCGAGTGGCAAACCATTGAGGCAGATGAGTTCAGGTAG
TGCTTATCAGAGGCAGAGTCAGAGAGCTTCCAGTCAGTCTGCGAACTCGGTAGCAAGATCGCGGACGGGTCAGGAGTCTGTTGCTAGTGAATCCAGGAGAACCCCATGTT
GTGGACAAACAGGACATTTCAAGAGGGATTGTCCACAGCTGAGAGTAGCAGTTCGGAGGGACCAGGGAGTTGAGTCCCACACAGTTGAGCAGCCGAGAATCTCAACAGCC
GCAGGGGAGGGAACTAGTGGTGCAAGACAAAAGGGAGTTGTGGGGAGACCTAGGCAGTAG
Protein sequenceShow/hide protein sequence
MYGIERLKKLGATVFEGFTDPANTEIGRRSEAYLRKSIIPPLKQGSLSVVEYERNYTELSRYAEMIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQ
SIVEEKSTMELSRGVSTTSDFKRRSSGKPLRQMSSGSAYQRQSQRASSQSANSVARSRTGQESVASESRRTPCCGQTGHFKRDCPQLRVAVRRDQGVESHTVEQPRISTA
AGEGTSGARQKGVVGRPRQ