| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 0.0e+00 | 97.59 | Show/hide |
Query: MSSTSSLLGVENTEASSPINQIFGSGNKISL------------FQILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISS
MSSTSSLLGVENTEASSPINQIFGSGNKISL FQILTALEAYDLENFLESESEPPSKYLIST SSSASATGTPNPAYKVWKRQDRLISS
Subjt: MSSTSSLLGVENTEASSPINQIFGSGNKISL------------FQILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISS
Query: WLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISV
WLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISV
Subjt: WLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISV
Query: ISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGGRGNRNKPQCQICAKLGHSAD
ISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRG RGNRNKPQCQICAKLG+SAD
Subjt: ISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGGRGNRNKPQCQICAKLGHSAD
Query: RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTL
RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLS GSEYGGGNQIYAANGSGLPITHYGSMSFNSSTL
Subjt: RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTL
Query: PFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWH
PFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTK VFNTVVPKSNTPLLDLWH
Subjt: PFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWH
Query: RRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF
RRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPA+NVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF
Subjt: RRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF
Query: LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPV
LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLIN LPTPV
Subjt: LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPV
Query: LDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSP
LDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSP
Subjt: LDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSP
Query: PLHSIIPSSLMNHNEDRRHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQTDS
PLHSIIPSSLMNHNEDRRHTDTVSDNTDHL+PTIVYPLETGTQESSRDDGNSGGITQSPSSMEP HQTDS
Subjt: PLHSIIPSSLMNHNEDRRHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQTDS
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| KAA0067212.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 1.0e-247 | 74.83 | Show/hide |
Query: QMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNH
QMSAMVA DLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLL
Subjt: QMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNH
Query: VFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFC
DLDTGQVLLQGLLNDGLYKFTI+PSHKRLHHS+SNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLP VKAVLNHID+SS
Subjt: VFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFC
Query: EACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKP
AFQKFKTCVEKSLGQSIKSLQTDGGTEFKP
Subjt: EACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKP
Query: FKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYL
FKPFLDQHGIEHRITCPYTSKQNDIVERKHR+IMEMGLTLLSQATLPLSFWDEAF TSVYLIN LPTPVLDNISPLEKLFCRKPNFP LRVFGCKCYPY
Subjt: FKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYL
Query: RPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDHLS
RPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSS PKSK+VLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTD+L+
Subjt: RPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDHLS
Query: PTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQTDSA-------------------GIFKPKVFLIDYTQTEPCNAKEAFNHPHWKKAMEEEFEALQ
TIVYPLETGTQESSRDDGNSGGITQSPS MEPPHQTDS IFKPK FLIDYTQTE CNAKEAFNHPHWKKAMEEEFEALQ
Subjt: PTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQTDSA-------------------GIFKPKVFLIDYTQTEPCNAKEAFNHPHWKKAMEEEFEALQ
Query: KNGT
KNGT
Subjt: KNGT
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| RVW60229.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 6.4e-189 | 42.46 | Show/hide |
Query: FQILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFK
+QI A+ Y LE FL + P K + + PNP ++ ++RQD L+ SWLL S+ L Q++ C SA E+W T+ F+S+ A+ M +K
Subjt: FQILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFK
Query: NKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQT
+++ +KK + +++Y K+ D LA+ +S DHIL I+ GLG +Y+S+I+VIS++ SPS+Q V S L+ E + K+ S SVN +Q
Subjt: NKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQT
Query: TEKGAESYIRTNQNNYHNNHSYNQRGG----RGNGRSNRG-GRGNRN---KPQCQICAKLGHSADRCFFRYTP--------------------RSNSSGY
+ +G S +N + NQ GG RG+ NRG GRG KPQCQ+C K GH+ RCF+RY P R+ +SG
Subjt: TEKGAESYIRTNQNNYHNNHSYNQRGG----RGNGRSNRG-GRGNRN---KPQCQICAKLGHSADRCFFRYTP--------------------RSNSSGY
Query: SPNSHNTSYTNMN-----NHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNL
++ N + T + ++ +M AMVA + + W+PDSGATNH+TH L NL++G+EY G ++I+ NG+GL I+H G F SS+ P K L N+
Subjt: SPNSHNTSYTNMN-----NHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNL
Query: LQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPS--HKRLHHSNSNTKSVF-----------NTVVPK---SNTP
L+VP+I KNL+SVSQFA+DN+V+FEFHP +C+VKD +LLQG L+ GLY+F + K S SN K+ N+ P+ S+
Subjt: LQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPS--HKRLHHSNSNTKSVF-----------NTVVPK---SNTP
Query: LLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLN
+ DLWH+RLGHP IV VLN T + + C AC LGK H LPF S T+YT PLQL+ DLWGPA S GF YY+SFVDAYSRYTW+YFL
Subjt: LLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLN
Query: SKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLIN
+KS AF FK E G +K+ QTD G EF+ K + +Q+GI HR++CP+TSKQN I+ERKHR+I+E+GLTLL+QA+LPL +W +AFST+V+LIN
Subjt: SKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLIN
Query: CLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYA-------SFAS
LPT VL P E LF KPN+ L+VFGC C+P+LRPY HKL RS+PCTFLGYS+ HKGYKCL GR+FISR V+FDE FP+A S
Subjt: CLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYA-------SFAS
Query: HSST-----PKSKDV--------LSPPLHSIIPSSLMNHN--EDRRHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEP--------
HS+ P K++ LS P S S ++ N D R NTD S + SS G I S +S EP
Subjt: HSST-----PKSKDV--------LSPPLHSIIPSSLMNHN--EDRRHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEP--------
Query: ------PHQ---TDSAGIFKPKVFLIDYTQTEPCNAKEAFNHPHWKKAMEEEFEALQKNGT
PH GIFKPKV+ +D EP +EA +HP WK+AM+EEF AL KN T
Subjt: ------PHQ---TDSAGIFKPKVFLIDYTQTEPCNAKEAFNHPHWKKAMEEEFEALQKNGT
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| RVW80632.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 2.2e-189 | 42.76 | Show/hide |
Query: QILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKN
QILT L + L++FL S PS++L SS NP ++ W++QD+LI SWLL S+++ +L +M++C ++ ++W+TL+ F+++ A+ QFK
Subjt: QILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKN
Query: KLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKL-ISETALPSVNIVTQT
+LHN KKG + + +Y LKI VD LA + +S DHI I GL DY++ I +++R D +V+E+ LLL QES+ E + I++ + PS+ + T
Subjt: KLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKL-ISETALPSVNIVTQT
Query: TEKGAESY---IRTNQNNYH-----NNHSYNQRGG---RGNGRSNRGGRGNRNKPQCQICAKLGHSADRCFFR----YTPRSNSSGYSPN---SHNTSYT
G+ + T +N+ N + RG +G GR RG NKPQCQ+C ++GH +C++R +T S G P +H
Subjt: TEKGAESY---IRTNQNNYH-----NNHSYNQRGG---RGNGRSNRGGRGNRNKPQCQICAKLGHSADRCFFR----YTPRSNSSGYSPN---SHNTSYT
Query: NMNNHPQMSAM-VAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVS
+ N P S++ ++ D+NWYPDSGAT+HLT +L+NL T S++ ++++ NG GLPI H G SF+SS +P K+ L LL VP ITKNL+SVS
Subjt: NMNNHPQMSAM-VAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVS
Query: QFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVF---NTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNS
+FA DNHVFFEFHPT C+VKDL T VL+ G L GLY F LH+S+ + VP S+T LWH RLGHP IV VLN +
Subjt: QFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVF---NTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNS
Query: SGTINKLN--FCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIK
+NK+ C AC +GK H PF HS + YT PL+LI DLWGP S +G +YYI F+DAYSR+TWIY L KS+AF F FK+ VE LG IK
Subjt: SGTINKLN--FCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIK
Query: SLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPS
++Q+D G E++ F +L +GI HRI+CPYT +QN + ERKHR+I+E G+ LL+QA+LP +WDEAF TSVYLIN LPTPVL N SPLE LF +KP++
Subjt: SLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPS
Query: LRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPK--SKDVLSPPLHSIIPSSLMNHNEDR
L+VFGC CYP LRP+ HKL RS PCTFLGYS +HKGYKCL+ +G + ISR V+FDE++FP+A S T S S P + +P ++
Subjt: LRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPK--SKDVLSPPLHSIIPSSLMNHNEDR
Query: RHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQT------DSAGIFKPKVFLIDYTQTEPCNAKEAFNHPHWKKAMEEEFEAL
+ S +T + ++P + N +Q P S PP + GIFKPK +LI T P + EA HWK+AM +E+ AL
Subjt: RHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQT------DSAGIFKPKVFLIDYTQTEPCNAKEAFNHPHWKKAMEEEFEAL
Query: QKNGT
+N T
Subjt: QKNGT
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| TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 0.0e+00 | 97.47 | Show/hide |
Query: MSSTSSLLGVENTEASSPINQIFGSGNKISL------------FQILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISS
MSSTSSLLGVENTEASSPINQIFGSGNKISL FQILTALEAYDLENFLESESEPPSKYLIST SSSASATGTPNPAYKVWKRQDRLISS
Subjt: MSSTSSLLGVENTEASSPINQIFGSGNKISL------------FQILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISS
Query: WLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISV
WLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISV
Subjt: WLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISV
Query: ISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGGRGNRNKPQCQICAKLGHSAD
ISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRG RGNRNKPQCQICAKLG+SAD
Subjt: ISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGGRGNRNKPQCQICAKLGHSAD
Query: RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTL
RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLS GSEYGGGNQIYAANGSGLPITHYGSMSFNSSTL
Subjt: RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTL
Query: PFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWH
PFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTK VFNTVVPKSNTPLLDLWH
Subjt: PFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWH
Query: RRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF
RRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPA+NVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF
Subjt: RRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF
Query: LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPV
LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLIN LPTPV
Subjt: LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPV
Query: LDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSP
LDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSS PKSKDVLSP
Subjt: LDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSP
Query: PLHSIIPSSLMNHNEDRRHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQTDS
PLHSIIPSSLMNHNEDRRHTDTVSDNTDHL+PTIVYPLETGTQESSRDDGNSGGITQSPSSMEP HQTDS
Subjt: PLHSIIPSSLMNHNEDRRHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQTDS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438FJP6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-189 | 42.46 | Show/hide |
Query: FQILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFK
+QI A+ Y LE FL + P K + + PNP ++ ++RQD L+ SWLL S+ L Q++ C SA E+W T+ F+S+ A+ M +K
Subjt: FQILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFK
Query: NKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQT
+++ +KK + +++Y K+ D LA+ +S DHIL I+ GLG +Y+S+I+VIS++ SPS+Q V S L+ E + K+ S SVN +Q
Subjt: NKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQT
Query: TEKGAESYIRTNQNNYHNNHSYNQRGG----RGNGRSNRG-GRGNRN---KPQCQICAKLGHSADRCFFRYTP--------------------RSNSSGY
+ +G S +N + NQ GG RG+ NRG GRG KPQCQ+C K GH+ RCF+RY P R+ +SG
Subjt: TEKGAESYIRTNQNNYHNNHSYNQRGG----RGNGRSNRG-GRGNRN---KPQCQICAKLGHSADRCFFRYTP--------------------RSNSSGY
Query: SPNSHNTSYTNMN-----NHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNL
++ N + T + ++ +M AMVA + + W+PDSGATNH+TH L NL++G+EY G ++I+ NG+GL I+H G F SS+ P K L N+
Subjt: SPNSHNTSYTNMN-----NHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNL
Query: LQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPS--HKRLHHSNSNTKSVF-----------NTVVPK---SNTP
L+VP+I KNL+SVSQFA+DN+V+FEFHP +C+VKD +LLQG L+ GLY+F + K S SN K+ N+ P+ S+
Subjt: LQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPS--HKRLHHSNSNTKSVF-----------NTVVPK---SNTP
Query: LLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLN
+ DLWH+RLGHP IV VLN T + + C AC LGK H LPF S T+YT PLQL+ DLWGPA S GF YY+SFVDAYSRYTW+YFL
Subjt: LLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLN
Query: SKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLIN
+KS AF FK E G +K+ QTD G EF+ K + +Q+GI HR++CP+TSKQN I+ERKHR+I+E+GLTLL+QA+LPL +W +AFST+V+LIN
Subjt: SKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLIN
Query: CLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYA-------SFAS
LPT VL P E LF KPN+ L+VFGC C+P+LRPY HKL RS+PCTFLGYS+ HKGYKCL GR+FISR V+FDE FP+A S
Subjt: CLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYA-------SFAS
Query: HSST-----PKSKDV--------LSPPLHSIIPSSLMNHN--EDRRHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEP--------
HS+ P K++ LS P S S ++ N D R NTD S + SS G I S +S EP
Subjt: HSST-----PKSKDV--------LSPPLHSIIPSSLMNHN--EDRRHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEP--------
Query: ------PHQ---TDSAGIFKPKVFLIDYTQTEPCNAKEAFNHPHWKKAMEEEFEALQKNGT
PH GIFKPKV+ +D EP +EA +HP WK+AM+EEF AL KN T
Subjt: ------PHQ---TDSAGIFKPKVFLIDYTQTEPCNAKEAFNHPHWKKAMEEEFEALQKNGT
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| A0A438H844 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-189 | 42.76 | Show/hide |
Query: QILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKN
QILT L + L++FL S PS++L SS NP ++ W++QD+LI SWLL S+++ +L +M++C ++ ++W+TL+ F+++ A+ QFK
Subjt: QILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKN
Query: KLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKL-ISETALPSVNIVTQT
+LHN KKG + + +Y LKI VD LA + +S DHI I GL DY++ I +++R D +V+E+ LLL QES+ E + I++ + PS+ + T
Subjt: KLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKL-ISETALPSVNIVTQT
Query: TEKGAESY---IRTNQNNYH-----NNHSYNQRGG---RGNGRSNRGGRGNRNKPQCQICAKLGHSADRCFFR----YTPRSNSSGYSPN---SHNTSYT
G+ + T +N+ N + RG +G GR RG NKPQCQ+C ++GH +C++R +T S G P +H
Subjt: TEKGAESY---IRTNQNNYH-----NNHSYNQRGG---RGNGRSNRGGRGNRNKPQCQICAKLGHSADRCFFR----YTPRSNSSGYSPN---SHNTSYT
Query: NMNNHPQMSAM-VAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVS
+ N P S++ ++ D+NWYPDSGAT+HLT +L+NL T S++ ++++ NG GLPI H G SF+SS +P K+ L LL VP ITKNL+SVS
Subjt: NMNNHPQMSAM-VAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVS
Query: QFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVF---NTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNS
+FA DNHVFFEFHPT C+VKDL T VL+ G L GLY F LH+S+ + VP S+T LWH RLGHP IV VLN +
Subjt: QFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVF---NTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNS
Query: SGTINKLN--FCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIK
+NK+ C AC +GK H PF HS + YT PL+LI DLWGP S +G +YYI F+DAYSR+TWIY L KS+AF F FK+ VE LG IK
Subjt: SGTINKLN--FCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIK
Query: SLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPS
++Q+D G E++ F +L +GI HRI+CPYT +QN + ERKHR+I+E G+ LL+QA+LP +WDEAF TSVYLIN LPTPVL N SPLE LF +KP++
Subjt: SLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPS
Query: LRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPK--SKDVLSPPLHSIIPSSLMNHNEDR
L+VFGC CYP LRP+ HKL RS PCTFLGYS +HKGYKCL+ +G + ISR V+FDE++FP+A S T S S P + +P ++
Subjt: LRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPK--SKDVLSPPLHSIIPSSLMNHNEDR
Query: RHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQT------DSAGIFKPKVFLIDYTQTEPCNAKEAFNHPHWKKAMEEEFEAL
+ S +T + ++P + N +Q P S PP + GIFKPK +LI T P + EA HWK+AM +E+ AL
Subjt: RHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQT------DSAGIFKPKVFLIDYTQTEPCNAKEAFNHPHWKKAMEEEFEAL
Query: QKNGT
+N T
Subjt: QKNGT
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| A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.0e+00 | 97.59 | Show/hide |
Query: MSSTSSLLGVENTEASSPINQIFGSGNKISL------------FQILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISS
MSSTSSLLGVENTEASSPINQIFGSGNKISL FQILTALEAYDLENFLESESEPPSKYLIST SSSASATGTPNPAYKVWKRQDRLISS
Subjt: MSSTSSLLGVENTEASSPINQIFGSGNKISL------------FQILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISS
Query: WLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISV
WLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISV
Subjt: WLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISV
Query: ISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGGRGNRNKPQCQICAKLGHSAD
ISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRG RGNRNKPQCQICAKLG+SAD
Subjt: ISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGGRGNRNKPQCQICAKLGHSAD
Query: RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTL
RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLS GSEYGGGNQIYAANGSGLPITHYGSMSFNSSTL
Subjt: RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTL
Query: PFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWH
PFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTK VFNTVVPKSNTPLLDLWH
Subjt: PFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWH
Query: RRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF
RRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPA+NVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF
Subjt: RRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF
Query: LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPV
LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLIN LPTPV
Subjt: LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPV
Query: LDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSP
LDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSP
Subjt: LDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSP
Query: PLHSIIPSSLMNHNEDRRHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQTDS
PLHSIIPSSLMNHNEDRRHTDTVSDNTDHL+PTIVYPLETGTQESSRDDGNSGGITQSPSSMEP HQTDS
Subjt: PLHSIIPSSLMNHNEDRRHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQTDS
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| A0A5A7VFQ6 Retrotransposon protein, putative, Ty1-copia subclass | 5.0e-248 | 74.83 | Show/hide |
Query: QMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNH
QMSAMVA DLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLL
Subjt: QMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNH
Query: VFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFC
DLDTGQVLLQGLLNDGLYKFTI+PSHKRLHHS+SNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLP VKAVLNHID+SS
Subjt: VFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTINKLNFC
Query: EACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKP
AFQKFKTCVEKSLGQSIKSLQTDGGTEFKP
Subjt: EACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKP
Query: FKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYL
FKPFLDQHGIEHRITCPYTSKQNDIVERKHR+IMEMGLTLLSQATLPLSFWDEAF TSVYLIN LPTPVLDNISPLEKLFCRKPNFP LRVFGCKCYPY
Subjt: FKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYL
Query: RPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDHLS
RPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSS PKSK+VLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTD+L+
Subjt: RPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDHLS
Query: PTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQTDSA-------------------GIFKPKVFLIDYTQTEPCNAKEAFNHPHWKKAMEEEFEALQ
TIVYPLETGTQESSRDDGNSGGITQSPS MEPPHQTDS IFKPK FLIDYTQTE CNAKEAFNHPHWKKAMEEEFEALQ
Subjt: PTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQTDSA-------------------GIFKPKVFLIDYTQTEPCNAKEAFNHPHWKKAMEEEFEALQ
Query: KNGT
KNGT
Subjt: KNGT
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| A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.0e+00 | 97.47 | Show/hide |
Query: MSSTSSLLGVENTEASSPINQIFGSGNKISL------------FQILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISS
MSSTSSLLGVENTEASSPINQIFGSGNKISL FQILTALEAYDLENFLESESEPPSKYLIST SSSASATGTPNPAYKVWKRQDRLISS
Subjt: MSSTSSLLGVENTEASSPINQIFGSGNKISL------------FQILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISS
Query: WLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISV
WLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISV
Subjt: WLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISV
Query: ISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGGRGNRNKPQCQICAKLGHSAD
ISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRG RGNRNKPQCQICAKLG+SAD
Subjt: ISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGGRGNRNKPQCQICAKLGHSAD
Query: RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTL
RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLS GSEYGGGNQIYAANGSGLPITHYGSMSFNSSTL
Subjt: RCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTL
Query: PFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWH
PFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTK VFNTVVPKSNTPLLDLWH
Subjt: PFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWH
Query: RRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF
RRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPA+NVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF
Subjt: RRLGHPHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAF
Query: LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPV
LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLIN LPTPV
Subjt: LAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPV
Query: LDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSP
LDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSS PKSKDVLSP
Subjt: LDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYASFASHSSTPKSKDVLSP
Query: PLHSIIPSSLMNHNEDRRHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQTDS
PLHSIIPSSLMNHNEDRRHTDTVSDNTDHL+PTIVYPLETGTQESSRDDGNSGGITQSPSSMEP HQTDS
Subjt: PLHSIIPSSLMNHNEDRRHTDTVSDNTDHLSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEPPHQTDS
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 4.8e-38 | 25.14 | Show/hide |
Query: PNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGS-MPLKEYFLKILQCVDALASINKPVSSDDH
PN WK+ +R S ++ +S+ LN +A++I E L ++ + LA + + +L ++K S M L +F + + L + + D
Subjt: PNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGS-MPLKEYFLKILQCVDALASINKPVSSDDH
Query: ILYILAGLGSDYQSMISVISART-DSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGGR
I ++L L S Y +I+ I + ++ ++ V + LL QE + N T++K + + N N Y NN N+ + + +
Subjt: ILYILAGLGSDYQSMISVISART-DSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGGR
Query: GN-RNKPQCQICAKLGHSADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQI-YA
GN + K +C C + GH CF + R ++ N + M V + + + DSGA++HL + S + E +I A
Subjt: GN-RNKPQCQICAKLGHSADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQI-YA
Query: ANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSN
G + T G + + TL ++L NL+SV + ++ + EF + + V G+LN+ + + + + N+
Subjt: ANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSN
Query: TKSVFNTVVPKSNTPLLDLWHRRLGH-PHLPIVKAVLNHIDNSSGTINKL----NFCEACALGKHHALPFSH--SLTLYTHPLQLITCDLWGPAINVSHN
K+ F LWH R GH +++ ++ + +N L CE C GK LPF T PL ++ D+ GP V+ +
Subjt: TKSVFNTVVPKSNTPLLDLWHRRLGH-PHLPIVKAVLNHIDNSSGTINKL----NFCEACALGKHHALPFSH--SLTLYTHPLQLITCDLWGPAINVSHN
Query: GFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEF--KPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLT
Y++ FVD ++ Y Y + KSD F FQ F E + L D G E+ + F + GI + +T P+T + N + ER R I E T
Subjt: GFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEF--KPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLT
Query: LLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNIS--PLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCL-ASDGRL
++S A L SFW EA T+ YLIN +P+ L + S P E +KP LRVFG Y +++ Q K +S F+GY + G+K A + +
Subjt: LLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNIS--PLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCL-ASDGRL
Query: FISRHVLFDENS
++R V+ DE +
Subjt: FISRHVLFDENS
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| P0C2I5 Transposon Ty1-LR2 Gag-Pol polyprotein | 4.9e-14 | 23.78 | Show/hide |
Query: DSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDL--DT
DSGA+ L S ++ + S N + A +PI G + F+ + T +L P+I +L+S+++ A T C+ K++ +
Subjt: DSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDL--DT
Query: GQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPL-LDLWHRRLGHPHLPIVKAVLNH----------IDNSSGTINKLNFCEACALG
+L ++ G + + S K L SN + ++ N +S HR L H + P ++ L + +D SS + C C +G
Subjt: GQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPL-LDLWHRRLGHPHLPIVKAVLNH----------IDNSSGTINKLNFCEACALG
Query: ---KHHALPFSHSLTLYTH-PLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNS-KSDAFL-AFQKFKTCVEKSLGQSIKSLQTDGGTEF--
KH + S ++ P Q + D++GP N+ ++ Y+ISF D +++ W+Y L+ + D+ L F ++ S+ +Q D G+E+
Subjt: ---KHHALPFSHSLTLYTH-PLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNS-KSDAFL-AFQKFKTCVEKSLGQSIKSLQTDGGTEF--
Query: KPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTP
+ FL+++GI T S+ + + ER +R +++ T L + LP W A S + N L +P
Subjt: KPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTP
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.7e-57 | 25.92 | Show/hide |
Query: WKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQ-CVDALASINKPVSSDDHILYILAG
W D +S + +S++++N ++ +A+ IW L+ ++ S+ L + K +L+ + L + + LA++ + +D + +L
Subjt: WKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQ-CVDALASINKPVSSDDHILYILAG
Query: LGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGGRGNRNKPQC
L S Y ++ + I + +++V S LL E + AL TE SY R++ N Y + G RG + NR RN C
Subjt: LGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGGRGNRNKPQC
Query: QICAKLGHSADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNI---DSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLP
C + GH C + +SG + + + N++ + +++ +S W D+ A++H T + +L G + N S
Subjt: QICAKLGHSADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNI---DSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLP
Query: ITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNT
I G + ++ + L ++ VP + NLIS +D + + + K V+ +G+ LY+ E L+ +
Subjt: ITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNT
Query: VVPKSNTPLLDLWHRRLGH---PHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDA
+DLWH+R+GH L I+ A + I + GT K C+ C GK H + F S + L L+ D+ GP S G +Y+++F+D
Subjt: VVPKSNTPLLDLWHRRLGH---PHLPIVKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDA
Query: YSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEF--KPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSF
SR W+Y L +K F FQKF VE+ G+ +K L++D G E+ + F+ + HGI H T P T + N + ER +R I+E ++L A LP SF
Subjt: YSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEF--KPFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSF
Query: WDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFI-SRHVLFDENSF
W EA T+ YLIN P+ L P ++ ++ L+VFGC+ + ++ Q KL +S PC F+GY GY+ + I SR V+F E+
Subjt: WDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFI-SRHVLFDENSF
Query: PYASFASHSSTPKSKDVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDHLSPTIVY--PLETGTQESSRDDGNSGGITQSPSSMEPPHQTDSAGI----F
A+ S K K+ + P + IPS+ N TD VS+ + I L+ G +E TQ +P +++ + +
Subjt: PYASFASHSSTPKSKDVLSPPLHSIIPSSLMNHNEDRRHTDTVSDNTDHLSPTIVY--PLETGTQESSRDDGNSGGITQSPSSMEPPHQTDSAGI----F
Query: KPKVFLIDYTQTEPCNAKEAFNHP---HWKKAMEEEFEALQKNGT
+++ EP + KE +HP KAM+EE E+LQKNGT
Subjt: KPKVFLIDYTQTEPCNAKEAFNHP---HWKKAMEEEFEALQKNGT
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.0e-122 | 34.09 | Show/hide |
Query: QILTALEAYDLENFLE-SESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFK
Q+ + Y+L FL+ S + PP+ + G+ +A NP Y WKRQD+LI S +LG++S + + +A +IWETL+ I+++ Q +
Subjt: QILTALEAYDLENFLE-SESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFK
Query: NKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQT
+L KG+ + +Y ++ D LA + KP+ D+ + +L L +Y+ +I I+A+ P++ E+ LL ES+ + + S T +P +T
Subjt: NKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQT
Query: TEKGAESYIRTNQNNYHNNHSYNQRGGRGNGR------SNRGGRGNRNKP---QCQICAKLGHSADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMS
+ N NN + N+ Y+ R N + +N N++KP +CQIC GHSA RC S+ + P S T + Q
Subjt: TEKGAESYIRTNQNNYHNNHSYNQRGGRGNGR------SNRGGRGNRNKP---QCQICAKLGHSADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMS
Query: AMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFF
A +A +NW DSGAT+H+T +NLS Y GG+ + A+GS +PI+H GS S ++ + P L+N+L VP+I KNLISV + N V
Subjt: AMVAALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFF
Query: EFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNS-SGTINKLNFCEA
EF P VKDL+TG LLQG D LY++ I S ++ ++K+ ++ WH RLGHP I+ +V+++ S +K C
Subjt: EFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVLNHIDNS-SGTINKLNFCEA
Query: CALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFK
C + K + +PFS S T PL+ I D+W I +SH+ +RYY+ FVD ++RYTW+Y L KS F FK +E I + +D G EF
Subjt: CALGKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFK
Query: PFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRP
+ QHGI H + P+T + N + ERKHR+I+E GLTLLS A++P ++W AF+ +VYLIN LPTP+L SP +KLF PN+ LRVFGC CYP+LRP
Subjt: PFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRP
Query: YQSHKLSLRSTPCTFLGYSTSHKGYKCL-ASDGRLFISRHVLFDENSFPYASF------------------ASHSSTPKSKDVL-----SPPLHSIIP--
Y HKL +S C FLGYS + Y CL RL+ISRHV FDEN FP++++ + H++ P VL S P H+ P
Subjt: YQSHKLSLRSTPCTFLGYSTSHKGYKCL-ASDGRLFISRHVLFDENSFPYASF------------------ASHSSTPKSKDVL-----SPPLHSIIP--
Query: --------SSLMNHNEDRRHTDTVSDNTDHLSP------TIVYPLETGTQ-ESSRDDGNSGGITQSPS----SMEPPHQTDSA
S + + N D + + + + +P P +T TQ SS++ + +SPS S+ P Q+ S+
Subjt: --------SSLMNHNEDRRHTDTVSDNTDHLSP------TIVYPLETGTQ-ESSRDDGNSGGITQSPS----SMEPPHQTDSA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.9e-122 | 35.33 | Show/hide |
Query: QILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKN
Q+ + Y+L FL+ + P + A NP Y W+RQD+LI S +LG++S + + +A +IWETL+ I+++ Q
Subjt: QILTALEAYDLENFLESESEPPSKYLISTGSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKN
Query: KLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTT
L+ + D LA + KP+ D+ + +L L DY+ +I I+A+ PS+ E+ L+ +ES+ + +E + N+VT
Subjt: KLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTT
Query: EKGAESYIRTNQNNYHNNHSYNQRGGRGNG--RSNRGGRGNRNKP-----QCQICAKLGHSADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMV
+ NQNN +N +YN R N S+ G R + +P +CQIC+ GHSA RC + +S ++ S T + Q A +
Subjt: EKGAESYIRTNQNNYHNNHSYNQRGGRGNG--RSNRGGRGNRNKP-----QCQICAKLGHSADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQMSAMV
Query: AALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFH
A +NW DSGAT+H+T +NLS Y GG+ + A+GS +PITH GS S +S+ +S LN +L VP+I KNLISV + N V EF
Subjt: AALDLNIDSNWYPDSGATNHLTHSLSNLSTGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFH
Query: PTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVL-NHIDNSSGTINKLNFCEACAL
P VKDL+TG LLQG D LY++ I ++S S+F + K+ WH RLGHP L I+ +V+ NH +KL C C +
Subjt: PTLCYVKDLDTGQVLLQGLLNDGLYKFTIEPSHKRLHHSNSNTKSVFNTVVPKSNTPLLDLWHRRLGHPHLPIVKAVL-NHIDNSSGTINKLNFCEACAL
Query: GKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFL
K H +PFS+S + PL+ I D+W I +S + +RYY+ FVD ++RYTW+Y L KS F FK+ VE I +L +D G EF + +L
Subjt: GKHHALPFSHSLTLYTHPLQLITCDLWGPAINVSHNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFKPFKPFL
Query: DQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQS
QHGI H + P+T + N + ERKHR+I+EMGLTLLS A++P ++W AFS +VYLIN LPTP+L SP +KLF + PN+ L+VFGC CYP+LRPY
Subjt: DQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSFWDEAFSTSVYLINCLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQS
Query: HKLSLRSTPCTFLGYSTSHKGYKCL-ASDGRLFISRHVLFDENSFPYASF---ASHSSTPKSKDVLSPPLHSIIPSSLMNHNED---RRHTDTVSDNTDH
HKL +S C F+GYS + Y CL GRL+ SRHV FDE FP+++ S S +S + P H+ +P++ + H DT
Subjt: HKLSLRSTPCTFLGYSTSHKGYKCL-ASDGRLFISRHVLFDENSFPYASF---ASHSSTPKSKDVLSPPLHSIIPSSLMNHNED---RRHTDTVSDNTDH
Query: LSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEP-----PHQTDSAGIFKP
SP + + SS S +PS P PHQT ++ P
Subjt: LSPTIVYPLETGTQESSRDDGNSGGITQSPSSMEP-----PHQTDSAGIFKP
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 7.7e-07 | 25.32 | Show/hide |
Query: NPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKI
+P Y+ W++ + ++ WL+ SM++++L +++ ++A ++WE L+ +F + Q + +L +++G ++EYF K+
Subjt: NPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKI
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| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 2.7e-07 | 22.84 | Show/hide |
Query: WKRQDRLISSWLLGSMS-EEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAG
W+++D ++ L G+++ ++ + ++++IW ++ F + A+A++ ++L G M + +Y+ K+ + D+L +++ PV+ + ++Y+L G
Subjt: WKRQDRLISSWLLGSMS-EEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYILAG
Query: LGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNR--GGRGNR
L + ++I+VI R PS + ++L Q E + P+ V ++ + NQ G RG GR N GRG R
Subjt: LGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNR--GGRGNR
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| AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 1.1e-16 | 28.36 | Show/hide |
Query: GSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCK-SAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALAS
G S+T TP K WK +D L+ W+ G++++ +L+ ++ +A+++W +L+ +F A+A+QF+N+L + + EY K+ D L +
Subjt: GSSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCK-SAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALAS
Query: INKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQ--NESK-LISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHS-----
++ P+S ++++L GL Y +++VI ++ PS E S+LL +ES+ N+SK +S T PS++ V T + E Y YHNN+S
Subjt: INKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQ--NESK-LISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHS-----
Query: ----YNQRGGRGNGRSNRGGRGNRNKPQCQICA------KLGHSADRCFFR--YTPRSNSSGYSPNSHNTSYTNM
N+ GG +GR N N+P I H + F + Y P+ S SH S T++
Subjt: ----YNQRGGRGNGRSNRGGRGNRNKPQCQICA------KLGHSADRCFFR--YTPRSNSSGYSPNSHNTSYTNM
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