; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0021121 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021121
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionVQ domain-containing protein
Genome locationchr04:30181288..30181783
RNA-Seq ExpressionPay0021121
SyntenyPay0021121
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043778.1 protein MKS1-like [Cucumis melo var. makuwa]3.7e-5198.17Show/hide
Query:  MMMNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF
        MMMNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQ NRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF
Subjt:  MMMNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF

Query:  VSACNCIPS
         SACNCIPS
Subjt:  VSACNCIPS

KAG6596645.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3175.93Show/hide
Query:  TAARNQ--SQLRGPRPPPLTVNKSSTNIFKKSTKNPNQ--HNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFV
        +AARNQ   +LRGPRPPPLTVNKSST IFKKST    +   NRR P+I+YLRSPKIIHVRPEEFKSFVQRLTGN SSVAVVA+S SA+GMI DH GE  V
Subjt:  TAARNQ--SQLRGPRPPPLTVNKSSTNIFKKSTKNPNQ--HNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFV

Query:  SACNCIPS
        SACN IPS
Subjt:  SACNCIPS

KGN59247.1 hypothetical protein Csa_002000 [Cucumis sativus]1.4e-3780.87Show/hide
Query:  MMMNFTAARNQSQLRGPRPPPLTVNK-SSTNIFKKSTKN-----PNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITD
        MM+   AARN SQLRGPRPPPLTVNK SSTNI KKSTKN      NQ +RRSPIIIYLRSPK+IHVRPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D
Subjt:  MMMNFTAARNQSQLRGPRPPPLTVNK-SSTNIFKKSTKN-----PNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITD

Query:  HSGEEFVSACNCIPS
           EEFVS CNCIPS
Subjt:  HSGEEFVSACNCIPS

KHN22584.1 hypothetical protein glysoja_037734 [Glycine soja]1.5e-1244.9Show/hide
Query:  MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF
        MN  A   Q QL+GP+P  L +N++ST I KK  ++ + H   SP+I++L+SPK+IHVRPEEF S VQ+LT N  S A  A     S  + ++  E+F
Subjt:  MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF

XP_008443599.1 PREDICTED: protein MKS1-like [Cucumis melo]4.1e-5098.13Show/hide
Query:  MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFVS
        MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQ NRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF S
Subjt:  MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFVS

Query:  ACNCIPS
        ACNCIPS
Subjt:  ACNCIPS

TrEMBL top hitse value%identityAlignment
A0A0A0LEW5 VQ domain-containing protein6.7e-3880.87Show/hide
Query:  MMMNFTAARNQSQLRGPRPPPLTVNK-SSTNIFKKSTKN-----PNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITD
        MM+   AARN SQLRGPRPPPLTVNK SSTNI KKSTKN      NQ +RRSPIIIYLRSPK+IHVRPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D
Subjt:  MMMNFTAARNQSQLRGPRPPPLTVNK-SSTNIFKKSTKN-----PNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITD

Query:  HSGEEFVSACNCIPS
           EEFVS CNCIPS
Subjt:  HSGEEFVSACNCIPS

A0A0B2QR10 VQ domain-containing protein7.4e-1344.9Show/hide
Query:  MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF
        MN  A   Q QL+GP+P  L +N++ST I KK  ++ + H   SP+I++L+SPK+IHVRPEEF S VQ+LT N  S A  A     S  + ++  E+F
Subjt:  MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF

A0A1S3B975 protein MKS1-like2.0e-5098.13Show/hide
Query:  MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFVS
        MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQ NRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF S
Subjt:  MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFVS

Query:  ACNCIPS
        ACNCIPS
Subjt:  ACNCIPS

A0A2N9GB07 VQ domain-containing protein2.0e-1355.29Show/hide
Query:  MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCS
        M+    +   QL+GPRP PLTVNKSST I K+   N     R SP+IIYL+SPK+IHVRPEEF   VQ+LTGN++   V A S S
Subjt:  MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCS

A0A5D3DP92 Protein MKS1-like1.8e-5198.17Show/hide
Query:  MMMNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF
        MMMNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQ NRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF
Subjt:  MMMNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF

Query:  VSACNCIPS
         SACNCIPS
Subjt:  VSACNCIPS

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B1.6e-0434.02Show/hide
Query:  GPRPPPLTVNKSSTNIFKK--------STKNPNQHNRR--------SPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHS
        GP+P PL V   S  I KK          + P  H +          P+ IY  +P+IIH  P  F + VQRLTG  S+    +SS S++    D S
Subjt:  GPRPPPLTVNKSSTNIFKK--------STKNPNQHNRR--------SPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHS

Q8LGD5 Protein MKS15.9e-0745Show/hide
Query:  RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNP-NQHNR--------RSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSV
        + Q Q+ GPRP PL+V+K S  I KK  K+P    NR        R P++IY  SPK++H    EF + VQRLTG  S V
Subjt:  RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNP-NQHNR--------RSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSV

Q9CA36 VQ motif-containing protein 8, chloroplastic5.9e-0741.25Show/hide
Query:  SQLRGPRPPPLTVNKSSTNIFKKST--KNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSAS
        +++ G RP  L +   S  I K S+    P  H R SP+IIY  SPK+IH R E+F + VQRLTG    +    S  S+S
Subjt:  SQLRGPRPPPLTVNKSSTNIFKKST--KNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSAS

Q9LS54 VQ motif-containing protein 201.2e-0443.33Show/hide
Query:  PRPPPLTVNKSSTNIFKKSTKN--PNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTG
        P PP L VNK S  I K  + +   +    R P+IIY  +P+IIH  P++F + VQ+LTG
Subjt:  PRPPPLTVNKSSTNIFKKSTKN--PNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.1e-0534.02Show/hide
Query:  GPRPPPLTVNKSSTNIFKK--------STKNPNQHNRR--------SPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHS
        GP+P PL V   S  I KK          + P  H +          P+ IY  +P+IIH  P  F + VQRLTG  S+    +SS S++    D S
Subjt:  GPRPPPLTVNKSSTNIFKK--------STKNPNQHNRR--------SPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHS

AT1G21326.1 VQ motif-containing protein1.8e-0638.89Show/hide
Query:  GPRPPPLTVNKSSTNIFKK--------STKNPNQHNRR--------SPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSAS
        GPRP PL V   S  I KK          + P  H +          P+IIY  SP+IIH  P  F + VQRLTG ++S +  +SS S+S
Subjt:  GPRPPPLTVNKSSTNIFKK--------STKNPNQHNRR--------SPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSAS

AT1G68450.1 VQ motif-containing protein4.2e-0841.25Show/hide
Query:  SQLRGPRPPPLTVNKSSTNIFKKST--KNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSAS
        +++ G RP  L +   S  I K S+    P  H R SP+IIY  SPK+IH R E+F + VQRLTG    +    S  S+S
Subjt:  SQLRGPRPPPLTVNKSSTNIFKKST--KNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSAS

AT3G18360.1 VQ motif-containing protein8.7e-0643.33Show/hide
Query:  PRPPPLTVNKSSTNIFKKSTKN--PNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTG
        P PP L VNK S  I K  + +   +    R P+IIY  +P+IIH  P++F + VQ+LTG
Subjt:  PRPPPLTVNKSSTNIFKKSTKN--PNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTG

AT3G18690.1 MAP kinase substrate 14.2e-0845Show/hide
Query:  RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNP-NQHNR--------RSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSV
        + Q Q+ GPRP PL+V+K S  I KK  K+P    NR        R P++IY  SPK++H    EF + VQRLTG  S V
Subjt:  RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNP-NQHNR--------RSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGAATTTCACCGCCGCAAGGAATCAATCGCAATTGCGAGGGCCAAGGCCGCCGCCGTTGACGGTGAACAAATCCTCCACTAACATTTTCAAGAAATCGACGAA
GAATCCTAATCAACACAATCGCCGTTCTCCGATAATCATTTACCTCCGATCGCCGAAGATCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACCG
GAAATCGATCCTCTGTAGCCGTCGTCGCGTCGTCCTGTTCTGCTAGTGGAATGATTACGGATCATTCTGGTGAGGAATTTGTATCCGCGTGCAATTGCATTCCGTCGTAG
mRNA sequenceShow/hide mRNA sequence
TATCATTTACCATTATATATAAATCCCAACCTCTTCCGTTCCTAATTCAAGAAGAAGACTGAAAAATCTCACCAATTTTCGAAGCCGCAGCGGGAAATTGAAGAAAAATG
ATGATGAATTTCACCGCCGCAAGGAATCAATCGCAATTGCGAGGGCCAAGGCCGCCGCCGTTGACGGTGAACAAATCCTCCACTAACATTTTCAAGAAATCGACGAAGAA
TCCTAATCAACACAATCGCCGTTCTCCGATAATCATTTACCTCCGATCGCCGAAGATCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACCGGAA
ATCGATCCTCTGTAGCCGTCGTCGCGTCGTCCTGTTCTGCTAGTGGAATGATTACGGATCATTCTGGTGAGGAATTTGTATCCGCGTGCAATTGCATTCCGTCGTAGCTT
CCGCCGTGGATCCGTCGTCGGTTCGGTGTTATTTGTAGGTGTAGCCGAGAGAGTGG
Protein sequenceShow/hide protein sequence
MMMNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQHNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFVSACNCIPS