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Pay0021193 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021193
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr06:12469238..12470609
RNA-Seq ExpressionPay0021193
SyntenyPay0021193
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041108.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-5776.47Show/hide
Query:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------
        MLRACVLQ KG+WDTHL LMEF YNN+YQSSI MAP EALYGRPCRTPVCWNEVGERKLVGPELVQ T++NIKLIRENL+ AQDRQK             
Subjt:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------

Query:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKER
            +FLKLSPWRGV+RFGRKDPSHVLQ QP ELKEDLSY EE VQILDRKE+
Subjt:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKER
KAA0041696.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.4e-5876.47Show/hide
Query:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------
        MLRACVLQ KG+WDTHL LMEF YNN+YQSSI +AP EALYGRPCRTPVCWNEVGERKLVGPELVQ T++NIKLIRENL+IAQDRQK             
Subjt:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------

Query:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKER
            +FLKLSPWRGV+RFGRKDPSHVLQ QP ELKEDLSY EE VQILDRKE+
Subjt:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKER
KAA0044258.1 reverse transcriptase [Cucumis melo var. makuwa]2.4e-5775.82Show/hide
Query:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------
        MLRACVLQ KG+WDTHL LMEF+YNN+YQSSI MAP EALYGRPCRTPVCWNEVGERKLVGPELVQ T++NIKLIRENL+ AQDRQK             
Subjt:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------

Query:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKER
            +FLKLSPWRGV+RFGRKDPSHVLQ QP ELKEDLSY EE VQILD+KE+
Subjt:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKER
TYK27997.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-7075.4Show/hide
Query:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------
        MLRACVLQFKGNWDTH SLMEF YNNSYQSS+ MAP EALYGRPCRTPVCWNEVGERKLVG ELVQ TSDNIKLIRENLKIA+DRQK             
Subjt:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------

Query:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKERSTGISSKPGGFLVFSD------------KLYLVW
            +FLKLSPWRGVLRFGRKDPSHVLQVQP ELK+DL YR+EA+QILDRKE+STG SSKPGGFLVFSD            KLYL+W
Subjt:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKERSTGISSKPGGFLVFSD------------KLYLVW
XP_016903070.1 PREDICTED: uncharacterized protein LOC107992029 [Cucumis melo]3.1e-7676.77Show/hide
Query:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------
        MLRACVLQFKGNWDTH SLMEF YNNSYQSS+ MAP EALYGRPCRTPVCWNEVGERKLVG ELVQ TSDNIKLIRENLKIA+DRQK             
Subjt:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------

Query:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKERSTGISSKPGGFLVFSD------------KLYLVWLESLFNILQLS
            +FLKLSPWRGVLRFGRKDPSHVLQVQP ELK+DL YR+EA+QILDRKE+STG SSKPGGFLVFSD            KLYL+WLESLFNILQLS
Subjt:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKERSTGISSKPGGFLVFSD------------KLYLVWLESLFNILQLS
TrEMBL top hitse value%identityAlignment
A0A1S4E520 uncharacterized protein LOC1079920291.5e-7676.77Show/hide
Query:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------
        MLRACVLQFKGNWDTH SLMEF YNNSYQSS+ MAP EALYGRPCRTPVCWNEVGERKLVG ELVQ TSDNIKLIRENLKIA+DRQK             
Subjt:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------

Query:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKERSTGISSKPGGFLVFSD------------KLYLVWLESLFNILQLS
            +FLKLSPWRGVLRFGRKDPSHVLQVQP ELK+DL YR+EA+QILDRKE+STG SSKPGGFLVFSD            KLYL+WLESLFNILQLS
Subjt:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKERSTGISSKPGGFLVFSD------------KLYLVWLESLFNILQLS
A0A5A7TDR2 Reverse transcriptase5.3e-5876.47Show/hide
Query:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------
        MLRACVLQ KG+WDTHL LMEF YNN+YQSSI MAP EALYGRPCRTPVCWNEVGERKLVGPELVQ T++NIKLIRENL+ AQDRQK             
Subjt:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------

Query:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKER
            +FLKLSPWRGV+RFGRKDPSHVLQ QP ELKEDLSY EE VQILDRKE+
Subjt:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKER
A0A5A7TI15 Reverse transcriptase3.1e-5876.47Show/hide
Query:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------
        MLRACVLQ KG+WDTHL LMEF YNN+YQSSI +AP EALYGRPCRTPVCWNEVGERKLVGPELVQ T++NIKLIRENL+IAQDRQK             
Subjt:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------

Query:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKER
            +FLKLSPWRGV+RFGRKDPSHVLQ QP ELKEDLSY EE VQILDRKE+
Subjt:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKER
A0A5A7TN04 Reverse transcriptase1.2e-5775.82Show/hide
Query:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------
        MLRACVLQ KG+WDTHL LMEF+YNN+YQSSI MAP EALYGRPCRTPVCWNEVGERKLVGPELVQ T++NIKLIRENL+ AQDRQK             
Subjt:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------

Query:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKER
            +FLKLSPWRGV+RFGRKDPSHVLQ QP ELKEDLSY EE VQILD+KE+
Subjt:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKER
A0A5D3DW05 Putative DNA/RNA polymerases superfamily protein5.4e-7175.4Show/hide
Query:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------
        MLRACVLQFKGNWDTH SLMEF YNNSYQSS+ MAP EALYGRPCRTPVCWNEVGERKLVG ELVQ TSDNIKLIRENLKIA+DRQK             
Subjt:  MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQK-------------

Query:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKERSTGISSKPGGFLVFSD------------KLYLVW
            +FLKLSPWRGVLRFGRKDPSHVLQVQP ELK+DL YR+EA+QILDRKE+STG SSKPGGFLVFSD            KLYL+W
Subjt:  ----IFLKLSPWRGVLRFGRKDPSHVLQVQPSELKEDLSYREEAVQILDRKERSTGISSKPGGFLVFSD------------KLYLVW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGAGCATGTGTCCTTCAGTTTAAGGGAAATTGGGATACCCACTTATCACTTATGGAGTTCACTTATAATAACAGCTACCAGTCTAGTATCGATATGGCACCATG
TGAGGCTTTGTATGGCAGACCATGTAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAACGAAAGCTAGTTGGTCCTGAGTTAGTACAAGATACGTCAGACAATATTAAGC
TGATTAGGGAAAATCTAAAAATAGCTCAGGATCGACAGAAGATTTTCTTAAAGTTATCTCCGTGGAGGGGTGTTCTTCGTTTTGGGAGGAAAGATCCTTCACATGTGTTG
CAAGTACAACCAAGTGAACTAAAAGAAGACTTGAGTTATAGAGAGGAAGCAGTTCAGATTCTCGATAGAAAGGAGCGAAGCACAGGAATTTCGAGCAAACCAGGAGGATT
TCTGGTGTTCTCTGATAAGCTCTATTTAGTTTGGTTAGAAAGCTTATTCAATATCCTACAACTTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGAGCATGTGTCCTTCAGTTTAAGGGAAATTGGGATACCCACTTATCACTTATGGAGTTCACTTATAATAACAGCTACCAGTCTAGTATCGATATGGCACCATG
TGAGGCTTTGTATGGCAGACCATGTAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAACGAAAGCTAGTTGGTCCTGAGTTAGTACAAGATACGTCAGACAATATTAAGC
TGATTAGGGAAAATCTAAAAATAGCTCAGGATCGACAGAAGATTTTCTTAAAGTTATCTCCGTGGAGGGGTGTTCTTCGTTTTGGGAGGAAAGATCCTTCACATGTGTTG
CAAGTACAACCAAGTGAACTAAAAGAAGACTTGAGTTATAGAGAGGAAGCAGTTCAGATTCTCGATAGAAAGGAGCGAAGCACAGGAATTTCGAGCAAACCAGGAGGATT
TCTGGTGTTCTCTGATAAGCTCTATTTAGTTTGGTTAGAAAGCTTATTCAATATCCTACAACTTTCATGA
Protein sequenceShow/hide protein sequence
MLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQKIFLKLSPWRGVLRFGRKDPSHVL
QVQPSELKEDLSYREEAVQILDRKERSTGISSKPGGFLVFSDKLYLVWLESLFNILQLS