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Pay0021197 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021197
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPol protein
Genome locationchr03:10474262..10474702
RNA-Seq ExpressionPay0021197
SyntenyPay0021197
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR016197 - Chromo-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032419.1 pol protein [Cucumis melo var. makuwa]1.1e-7498.63Show/hide
Query:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
        KDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
Subjt:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV

Query:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Subjt:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

KAA0036508.1 pol protein [Cucumis melo var. makuwa]2.9e-7597.95Show/hide
Query:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
        KDLEFE+GDKVFLKVAPMRGV+RFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
Subjt:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV

Query:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFEE
Subjt:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

KAA0053367.1 pol protein [Cucumis melo var. makuwa]1.1e-7498.63Show/hide
Query:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
        KDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
Subjt:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV

Query:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Subjt:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

KAA0056702.1 pol protein [Cucumis melo var. makuwa]2.5e-7497.95Show/hide
Query:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
        KDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
Subjt:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV

Query:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYP+LFEE
Subjt:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

KAA0059807.1 pol protein [Cucumis melo var. makuwa]3.2e-7497.95Show/hide
Query:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
        KDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
Subjt:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV

Query:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        L REVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Subjt:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

TrEMBL top hitse value%identityAlignment
A0A5A7ST46 Pol protein5.4e-7598.63Show/hide
Query:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
        KDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
Subjt:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV

Query:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Subjt:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

A0A5A7T131 Pol protein1.4e-7597.95Show/hide
Query:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
        KDLEFE+GDKVFLKVAPMRGV+RFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
Subjt:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV

Query:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFEE
Subjt:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

A0A5A7UFU0 Pol protein5.4e-7598.63Show/hide
Query:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
        KDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
Subjt:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV

Query:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Subjt:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

A0A5A7ULI8 Pol protein1.2e-7497.95Show/hide
Query:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
        KDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
Subjt:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV

Query:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYP+LFEE
Subjt:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

A0A5A7UYS8 Pol protein1.6e-7497.95Show/hide
Query:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
        KDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV
Subjt:  KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEV

Query:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        L REVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Subjt:  LAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein6.2e-0440.85Show/hide
Query:  EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        EF+ GD V +K    R    F  +  KL+P F  PF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT35 Transposon Tf2-2 polyprotein6.2e-0440.85Show/hide
Query:  EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        EF+ GD V +K    R    F  +  KL+P F  PF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT36 Transposon Tf2-3 polyprotein6.2e-0440.85Show/hide
Query:  EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        EF+ GD V +K    R    F  +  KL+P F  PF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT41 Transposon Tf2-12 polyprotein6.2e-0440.85Show/hide
Query:  EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        EF+ GD V +K    R    F  +  KL+P F  PF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

Q9UR07 Transposon Tf2-11 polyprotein6.2e-0440.85Show/hide
Query:  EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        EF+ GD V +K    R    F  +  KL+P F  PF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGATCTTGAGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCGTGCGTTTTGAAAGGAGGGGAAAGCTGAGTCCTCGTTTTGTTAGGCC
GTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGC
CAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAGATTGATGAAAACTTGAGCTATACTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAAACGTTGAGGAAT
AAAGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGGTAGAAGAGGCTACGTGGGAGCGTGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAGGAATA
A
mRNA sequenceShow/hide mRNA sequence
AAGGATCTTGAGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCGTGCGTTTTGAAAGGAGGGGAAAGCTGAGTCCTCGTTTTGTTAGGCC
GTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGC
CAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAGATTGATGAAAACTTGAGCTATACTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAAACGTTGAGGAAT
AAAGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGGTAGAAGAGGCTACGTGGGAGCGTGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAGGAATA
A
Protein sequenceShow/hide protein sequence
KDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVRPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRN
KEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE