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Pay0021285 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021285
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibonuclease H
Genome locationchr01:17548534..17549100
RNA-Seq ExpressionPay0021285
SyntenyPay0021285
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]2.9e-8389.66Show/hide
Query:  KEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYN
        +EIPP+GTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMKL IDPSYLRPSTMVV AFD A REVIGDIDIPLKIGPSTFNVSFQVMD+NS Y+
Subjt:  KEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYN

Query:  FLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT
         LLG+PWIHSAGAVPSSLHQRLKFS+EGGQAIVYGE+DMFVTKTS LPYVEA EEALECSYRSFE ANATIFPT
Subjt:  FLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT

KAA0043020.1 uncharacterized protein E6C27_scaffold75G00990 [Cucumis melo var. makuwa]3.0e-8888.77Show/hide
Query:  MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTF
        +ENITAT+CI FTD+EIPPKGTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMKL IDPSYLR S MVV AFDGARREVI DIDIPLKIGPSTF
Subjt:  MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTF

Query:  NVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFP
        NVS QVMDVNSSY+ LLG+PWIHSAGAVPS LHQRLKFS+EGGQAIVYGED+MFVTK S LPYVEA EEALECSYRSFEIANATIFP
Subjt:  NVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFP

KAA0046608.1 uncharacterized protein E6C27_scaffold114G001540 [Cucumis melo var. makuwa]3.4e-9289.89Show/hide
Query:  MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTF
        +ENITATNCI FTD+EIPP+GTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMKL IDPSYLRPSTMVV AFDGARREVI DIDIPLKIGPSTF
Subjt:  MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTF

Query:  NVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT
        N+SFQVMD+NSSY+ LLG+PWIHS GAVPSSLHQRLKFS+EGGQAIVYGE+DMFVTKTS LPYVEA EEALECSYRSFEIANATIFPT
Subjt:  NVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT

KAA0049671.1 uncharacterized protein E6C27_scaffold76G00060 [Cucumis melo var. makuwa]2.2e-8399.37Show/hide
Query:  DKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSY
        +KEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSY
Subjt:  DKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSY

Query:  NFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALE
        NFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALE
Subjt:  NFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALE

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]5.8e-9290.43Show/hide
Query:  MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTF
        +ENI ATNCI FTD+EIPP+GTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMKL IDPSYLRPSTMVV AFDGARREVIGDIDIPLKIGPSTF
Subjt:  MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTF

Query:  NVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT
        NVSFQVMD+NSSY+ LLG+PWIHSAGAVPSSLHQRLKFS+E GQAIVYGE+DMFVTKTS LPYVEA EEALECSYRSFEIANATIFPT
Subjt:  NVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase1.4e-8389.66Show/hide
Query:  KEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYN
        +EIPP+GTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMKL IDPSYLRPSTMVV AFD A REVIGDIDIPLKIGPSTFNVSFQVMD+NS Y+
Subjt:  KEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYN

Query:  FLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT
         LLG+PWIHSAGAVPSSLHQRLKFS+EGGQAIVYGE+DMFVTKTS LPYVEA EEALECSYRSFE ANATIFPT
Subjt:  FLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT

A0A5A7TI68 Uncharacterized protein1.4e-8888.77Show/hide
Query:  MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTF
        +ENITAT+CI FTD+EIPPKGTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMKL IDPSYLR S MVV AFDGARREVI DIDIPLKIGPSTF
Subjt:  MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTF

Query:  NVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFP
        NVS QVMDVNSSY+ LLG+PWIHSAGAVPS LHQRLKFS+EGGQAIVYGED+MFVTK S LPYVEA EEALECSYRSFEIANATIFP
Subjt:  NVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFP

A0A5A7TUT4 Uncharacterized protein1.6e-9289.89Show/hide
Query:  MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTF
        +ENITATNCI FTD+EIPP+GTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMKL IDPSYLRPSTMVV AFDGARREVI DIDIPLKIGPSTF
Subjt:  MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTF

Query:  NVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT
        N+SFQVMD+NSSY+ LLG+PWIHS GAVPSSLHQRLKFS+EGGQAIVYGE+DMFVTKTS LPYVEA EEALECSYRSFEIANATIFPT
Subjt:  NVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT

A0A5A7U7X5 Ribonuclease H1.1e-8399.37Show/hide
Query:  DKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSY
        +KEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSY
Subjt:  DKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSY

Query:  NFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALE
        NFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALE
Subjt:  NFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALE

A0A5A7V681 Retrotrans_gag domain-containing protein2.8e-9290.43Show/hide
Query:  MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTF
        +ENI ATNCI FTD+EIPP+GTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMKL IDPSYLRPSTMVV AFDGARREVIGDIDIPLKIGPSTF
Subjt:  MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTF

Query:  NVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT
        NVSFQVMD+NSSY+ LLG+PWIHSAGAVPSSLHQRLKFS+E GQAIVYGE+DMFVTKTS LPYVEA EEALECSYRSFEIANATIFPT
Subjt:  NVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATATAACTGCTACAAATTGCATTTTCTTTACAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGTGTAAGGACCA
TCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGG
TTGTAACAGCCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAAT
TCCTCATACAATTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGT
CTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTA
CTATCTTTCCAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATATAACTGCTACAAATTGCATTTTCTTTACAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGTGTAAGGACCA
TCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGG
TTGTAACAGCCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAAT
TCCTCATACAATTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGT
CTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTA
CTATCTTTCCAACATAA
Protein sequenceShow/hide protein sequence
MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVN
SSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT