; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0021407 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021407
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionIntegrase
Genome locationchr08:21142032..21142781
RNA-Seq ExpressionPay0021407
SyntenyPay0021407
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038926.1 integrase [Cucumis melo var. makuwa]3.7e-13998.8Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

KAA0048003.1 integrase [Cucumis melo var. makuwa]3.7e-13998.8Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

KAA0057291.1 integrase [Cucumis melo var. makuwa]3.7e-13998.8Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

KAA0060377.1 integrase [Cucumis melo var. makuwa]3.7e-13998.8Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

TYJ95504.1 integrase [Cucumis melo var. makuwa]3.7e-13998.8Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

TrEMBL top hitse value%identityAlignment
A0A5A7TWN2 Integrase1.8e-13998.8Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

A0A5A7UDP7 Integrase1.8e-13998.8Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

A0A5D3CLV1 Integrase1.8e-13998.8Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

A0A5D3D538 Integrase1.8e-13998.8Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

A0A5D3E3T2 Integrase1.8e-13998.8Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKC +KCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.3e-4540.94Show/hide
Query:  MENASPCNTPMDA--NLKLCKDDIGEAVDPSLYRSLVGSLMY-LTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKK--VSESVL
        MEN +  +TP+ +  N +L   D  +   P   RSL+G LMY +  TRPD+  AV++LSR+ +      W+  KRVLRY+ GTI+  + +KK    E+ +
Subjt:  MENASPCNTPMDA--NLKLCKDDIGEAVDPSLYRSLVGSLMY-LTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKK--VSESVL

Query:  FGFCDSDWGGNVDDHKSTSGYVFSM-GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRS
         G+ DSDW G+  D KST+GY+F M    +  W +K+Q+ VA S+TEAEY++L  A  +ALWL+++L  +    +    ++ DN   I+++ NP  H R+
Subjt:  FGFCDSDWGGNVDDHKSTSGYVFSM-GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRS

Query:  KHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQ
        KHI IKYHF R+ V++  + ++Y  T++Q+ADIFTK L    FV+ R KLG+ Q
Subjt:  KHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQ

P0CV72 Secreted RxLR effector protein 1612.8e-2847.66Show/hide
Query:  YRSLVGSLMYL-TATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTS
        Y S VG++MYL   TRPD+  AV +LS+F ++P  +HW+A KRVLRY+  T  +G+ + +   + L G+ D+DW G+V+  +STSGY+F +  G  SW S
Subjt:  YRSLVGSLMYL-TATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTS

Query:  KKQSVVALSTTEAEYISLAAAGCQALWL
        KKQ  VALS+TE EY++L+ A  +A+WL
Subjt:  KKQSVVALSTTEAEYISLAAAGCQALWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.3e-4943.9Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPS------LYRSLVGSLMY-LTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSES
        M+NA P +TP+  +LKL K      V+         Y S VGSLMY +  TRPDI  AV ++SRF+ NP + HWEA K +LRY+ GT    + +   S+ 
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPS------LYRSLVGSLMY-LTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSES

Query:  VLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGR
        +L G+ D+D  G++D+ KS++GY+F+   G  SW SK Q  VALSTTEAEYI+    G + +WL+  L+EL   +K E V++CD+ SAI LSKN ++H R
Subjt:  VLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGR

Query:  SKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKAL---KFDL
        +KHI ++YH+IR++V D  + V    T +  AD+ TK +   KF+L
Subjt:  SKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKAL---KFDL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.3e-5345.38Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        M  A P  TPM  + KL      +  DP+ YR +VGSL YL  TRPDI +AV+ LS+FM  P   H +A KR+LRY+ GT N GI+ KK +   L  + D
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        +DW G+ DD+ ST+GY+  +G    SW+SKKQ  V  S+TEAEY S+A    +  W+  +L EL        V++CDN  A  L  NPVFH R KHI I 
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        YHFIR+ V+ G + V +  T DQ+AD  TK L    F  F  K+GV +V
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.2e-5244.58Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        M  A P  TPM  + KL      +  DP+ YR +VGSL YL  TRPD+ +AV+ LS++M  P   HW A KRVLRY+ GT + GI+ KK +   L  + D
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK
        +DW G+ DD+ ST+GY+  +G    SW+SKKQ  V  S+TEAEY S+A    +  W+  +L EL        V++CDN  A  L  NPVFH R KHI + 
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIK

Query:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        YHFIR+ V+ G + V +  T DQ+AD  TK L    F  F  K+GV +V
Subjt:  YHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.0e-3940.8Show/hide
Query:  PCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGG
        P + PMD ++       G+ VD   YR L+G LMYL  TR DI FAV+ LS+F   P+ +H +A  ++L YI GT+  G++Y   +E  L  F D+ +  
Subjt:  PCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGG

Query:  NVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIR
          D  +ST+GY   +G+ + SW SKKQ VV+ S+ EAEY +L+ A  + +WL    +EL+      T+LFCDN +AI ++ N VFH R+KHI    H +R
Subjt:  NVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIR

Query:  D
        +
Subjt:  D

ATMG00240.1 Gag-Pol-related retrotransposon family protein2.9e-1241.03Show/hide
Query:  MYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGY
        MYLT TRPD+ FAV+ LS+F +  + +  +A  +VL Y+ GT+  G++Y   S+  L  F DSDW    D  +S +G+
Subjt:  MYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGY

ATMG00810.1 DNA/RNA polymerases superfamily protein4.1e-2739.74Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        M +  P +TP+   L        +  DPS +RS+VG+L YLT TRPDI +AV+++ + M  P  + ++  KRVLRY+ GTI  G+Y  K S+  +  FCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        SDW G     +ST+G+   +G  + SW++K+Q  V+ S+TE EY +LA    +  W
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAG
CTTAATGTATTTGACAGCAACAAGACCTGATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGAAAAAGAGTTC
TTCGTTATATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCAT
AAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTT
AGCTGCAGCTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAAAAGAATTGAAGTGTACTAAAAAATGTGAAACTGTTTTATTTTGTGATAATGGATCTGCCATAGCAT
TATCAAAGAATCCAGTTTTCCATGGAAGAAGCAAGCATATTAGAATCAAATATCATTTTATCAGAGACTTGGTTAAAGATGGAGAAGTGATAGTAAAATATTGCAAGACT
CAAGATCAAGTGGCTGATATTTTTACAAAGGCGCTCAAGTTTGACTTATTTGTTAAATTCAGAGGAAAACTTGGAGTTGCTCAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAG
CTTAATGTATTTGACAGCAACAAGACCTGATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGAAAAAGAGTTC
TTCGTTATATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCAT
AAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTT
AGCTGCAGCTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAAAAGAATTGAAGTGTACTAAAAAATGTGAAACTGTTTTATTTTGTGATAATGGATCTGCCATAGCAT
TATCAAAGAATCCAGTTTTCCATGGAAGAAGCAAGCATATTAGAATCAAATATCATTTTATCAGAGACTTGGTTAAAGATGGAGAAGTGATAGTAAAATATTGCAAGACT
CAAGATCAAGTGGCTGATATTTTTACAAAGGCGCTCAAGTTTGACTTATTTGTTAAATTCAGAGGAAAACTTGGAGTTGCTCAAGTTTAG
Protein sequenceShow/hide protein sequence
MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDH
KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTKKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKT
QDQVADIFTKALKFDLFVKFRGKLGVAQV