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Pay0021636 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021636
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description60S ribosomal protein L27
Genome locationchr07:23172301..23174659
RNA-Seq ExpressionPay0021636
SyntenyPay0021636
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001141 - Ribosomal protein L27e
IPR008991 - Translation protein SH3-like domain superfamily
IPR038655 - Ribosomal protein L27e superfamily
IPR041991 - Eukaryotic Ribosomal Protein L27, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649234.1 hypothetical protein Csa_014974 [Cucumis sativus]1.1e-6096.92Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVT+DSL
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKV+AAKETKKRFEERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

XP_004147739.1 60S ribosomal protein L27 [Cucumis sativus]1.4e-6096.15Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKV+AAKETKKRFEERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

XP_004147740.1 60S ribosomal protein L27 [Cucumis sativus]1.1e-6096.92Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVT+DSL
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKV+AAKETKKRFEERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

XP_008451849.1 PREDICTED: 60S ribosomal protein L27-like [Cucumis melo]3.8e-6198.46Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKVSAAKETKKRFEERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

XP_008451854.1 PREDICTED: 60S ribosomal protein L27 [Cucumis melo]6.5e-6196.92Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKVSAAKETKKRFEERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

TrEMBL top hitse value%identityAlignment
A0A0A0KVB4 60S ribosomal protein L275.3e-6196.92Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVT+DSL
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKV+AAKETKKRFEERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

A0A1S3BSF6 60S ribosomal protein L273.1e-6196.92Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKVSAAKETKKRFEERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

A0A1S3BT89 60S ribosomal protein L271.8e-6198.46Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKVSAAKETKKRFEERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

A0A5A7V5M7 60S ribosomal protein L271.8e-6198.46Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKVSAAKETKKRFEERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

A0A5A7VAJ2 60S ribosomal protein L273.1e-6196.92Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVTIDSL
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKVSAAKETKKRFEERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

SwissProt top hitse value%identityAlignment
P41101 60S ribosomal protein L276.5e-4876.12Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDL----KDVVT
        M KFLKPNKAVI+LQG+YAGRKAVI+RAFD+GTRDR YGHCLVAGI +YP KVIRKDSAKK  KKSRVKAFIKLVNY H+MPTRYTLD DL    KDVV 
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDL----KDVVT

Query:  IDSLQSKDKKVSAAKETKKRFEERFKTGKNRNHF
         D LQ++DKKV+ A+ TK R  ERFKTGKNR  F
Subjt:  IDSLQSKDKKVSAAKETKKRFEERFKTGKNRNHF

P51419 60S ribosomal protein L27-32.7e-5482.31Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLK NKAVI+LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYP+KVIRKDSAKKTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKV+A KE K + EERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

Q05462 60S ribosomal protein L272.1e-5482.31Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLKPNKAVI+LQGRYAG+KAVI++ FDDGTR++ YGHCLVAGIKK+P+KVI+KDSAKKTAKKSRVKAF+KLVNY+HLMPTRYTLDVDLKD V  D L
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKV+A KETKK  EERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

Q8LCL3 60S ribosomal protein L27-21.0e-5381.54Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLK NKAVI+LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYP+KVIRKDSAKKTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        +SKDKKV+A KE K + EERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

Q9SKX8 60S ribosomal protein L27-12.0e-4973.08Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVK +KP KAVI+LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYP+KVIRKDSAKKTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
         SKDKKV+A KE K +FEERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

Arabidopsis top hitse value%identityAlignment
AT2G32220.1 Ribosomal L27e protein family1.4e-5073.08Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVK +KP KAVI+LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYP+KVIRKDSAKKTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
         SKDKKV+A KE K +FEERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

AT3G22230.1 Ribosomal L27e protein family7.4e-5581.54Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLK NKAVI+LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYP+KVIRKDSAKKTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        +SKDKKV+A KE K + EERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

AT4G15000.1 Ribosomal L27e protein family1.9e-5582.31Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLK NKAVI+LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYP+KVIRKDSAKKTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKV+A KE K + EERFKTGKNR  F
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF

AT4G15000.2 Ribosomal L27e protein family4.0e-5380.77Show/hide
Query:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL
        MVKFLK NKAVI+LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYP+KVIRKDSAKKTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L
Subjt:  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSL

Query:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF
        QSKDKKV+A KE K + EERFKT  +R HF
Subjt:  QSKDKKVSAAKETKKRFEERFKTGKNRNHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGTTCCTCAAGCCTAACAAAGCCGTCATCGTCCTTCAAGGCCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCTTTCGATGACGGGACTCGGGAT
CGCGCTTATGGCCACTGCTTGGTCGCTGGAATCAAGAAGTACCCGGCCAAGGTCATCCGCAAGGACTCTGCGAAGAAGACCGCTAAAAAATCCCGTGTCAAGGCC
TTCATTAAGCTCGTCAATTATAGGCATCTGATGCCCACTAGGTACACTCTCGATGTCGATCTTAAAGACGTTGTCACTATCGATTCGTTGCAGTCAAAAGACAAA
AAGGTCTCCGCCGCCAAAGAGACCAAGAAGAGGTTCGAGGAAAGGTTCAAAACCGGGAAGAACAGAAACCATTTTTTGTTGGTAGGCTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGTTCCTCAAGCCTAACAAAGCCGTCATCGTCCTTCAAGGCCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCTTTCGATGACGGGACTCGGGAT
CGCGCTTATGGCCACTGCTTGGTCGCTGGAATCAAGAAGTACCCGGCCAAGGTCATCCGCAAGGACTCTGCGAAGAAGACCGCTAAAAAATCCCGTGTCAAGGCC
TTCATTAAGCTCGTCAATTATAGGCATCTGATGCCCACTAGGTACACTCTCGATGTCGATCTTAAAGACGTTGTCACTATCGATTCGTTGCAGTCAAAAGACAAA
AAGGTCTCCGCCGCCAAAGAGACCAAGAAGAGGTTCGAGGAAAGGTTCAAAACCGGGAAGAACAGAAACCATTTTTTGTTGGTAGGCTCGTAG
Protein sequenceShow/hide protein sequence
MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDK
KVSAAKETKKRFEERFKTGKNRNHFLLVGS