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Pay0021785 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021785
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag-pol polyprotein
Genome locationchr04:4984768..4985446
RNA-Seq ExpressionPay0021785
SyntenyPay0021785
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034956.1 F5J5.1 [Cucumis melo var. makuwa]3.6e-2647.62Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA----------------------------KAKRTPAAIQIKVSNADGGKKVDKSL
        MDVK+ F+N Y+ E+VYVAQPKGF D   P HVYKL KALYGLKQA                            + KRTPAA  +K++       +D  L
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA----------------------------KAKRTPAAIQIKVSNADGGKKVDKSL

Query:  YQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI
        Y+SIIRSLLYL AS  DI YA+G+CA++Q  P  SHL   K I+KY+
Subjt:  YQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI

KAA0053951.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]1.7e-2851.01Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQ------------------------------AKAKRTPAAIQIKVSNADGGKKVDK
        MDVK+  +NRY++EEVYVAQPKGF D  + DHVYKL+KALYGLKQ                              AK KRTPAA  +K++    GKKVD 
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQ------------------------------AKAKRTPAAIQIKVSNADGGKKVDK

Query:  SLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI
        + Y+SII +LLYL AS  DI + +GVCARYQ  P  SHL  +K ILKYI
Subjt:  SLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI

TYK04260.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]5.9e-2951.68Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQ------------------------------AKAKRTPAAIQIKVSNADGGKKVDK
        MDVK+  +NRY++EEVYVAQPKGF D  + DHVYKL+KALYGLKQ                              AK KRTPAA  +K++    GKKVD 
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQ------------------------------AKAKRTPAAIQIKVSNADGGKKVDK

Query:  SLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI
        + Y+SII +LLYL AS  DI +A+GVCARYQ  P  SHL  +K ILKYI
Subjt:  SLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI

TYK21311.1 F5J5.1 [Cucumis melo var. makuwa]3.6e-2647.62Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA----------------------------KAKRTPAAIQIKVSNADGGKKVDKSL
        MDVK+ F+N Y+ E+VYVAQPKGF D   P HVYKL KALYGLKQA                            + KRTPAA  +K++       +D  L
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA----------------------------KAKRTPAAIQIKVSNADGGKKVDKSL

Query:  YQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI
        Y+SIIRSLLYL AS  DI YA+G+CA++Q  P  SHL   K I+KY+
Subjt:  YQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI

XP_016903537.1 PREDICTED: uncharacterized protein LOC107992223 [Cucumis melo]2.0e-6199.18Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQAKAKRTPAAIQIKVSNADGGKKVDKSLYQSIIRSLLYLNASLSDIVYAIGVCARY
        MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQ KAKRTPAAIQIKVSNADGGKKVDKSLYQSIIRSLLYLNASLSDIVYAIGVCARY
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQAKAKRTPAAIQIKVSNADGGKKVDKSLYQSIIRSLLYLNASLSDIVYAIGVCARY

Query:  QDVPHESHLRYSKWILKYIRNY
        QDVPHESHLRYSKWILKYIRNY
Subjt:  QDVPHESHLRYSKWILKYIRNY

TrEMBL top hitse value%identityAlignment
A0A1S4E5P2 uncharacterized protein LOC1079922239.7e-6299.18Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQAKAKRTPAAIQIKVSNADGGKKVDKSLYQSIIRSLLYLNASLSDIVYAIGVCARY
        MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQ KAKRTPAAIQIKVSNADGGKKVDKSLYQSIIRSLLYLNASLSDIVYAIGVCARY
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQAKAKRTPAAIQIKVSNADGGKKVDKSLYQSIIRSLLYLNASLSDIVYAIGVCARY

Query:  QDVPHESHLRYSKWILKYIRNY
        QDVPHESHLRYSKWILKYIRNY
Subjt:  QDVPHESHLRYSKWILKYIRNY

A0A5A7SYI8 F5J5.11.7e-2647.62Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA----------------------------KAKRTPAAIQIKVSNADGGKKVDKSL
        MDVK+ F+N Y+ E+VYVAQPKGF D   P HVYKL KALYGLKQA                            + KRTPAA  +K++       +D  L
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA----------------------------KAKRTPAAIQIKVSNADGGKKVDKSL

Query:  YQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI
        Y+SIIRSLLYL AS  DI YA+G+CA++Q  P  SHL   K I+KY+
Subjt:  YQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI

A0A5A7UK92 Flocculation protein FLO11-like8.3e-2951.01Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQ------------------------------AKAKRTPAAIQIKVSNADGGKKVDK
        MDVK+  +NRY++EEVYVAQPKGF D  + DHVYKL+KALYGLKQ                              AK KRTPAA  +K++    GKKVD 
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQ------------------------------AKAKRTPAAIQIKVSNADGGKKVDK

Query:  SLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI
        + Y+SII +LLYL AS  DI + +GVCARYQ  P  SHL  +K ILKYI
Subjt:  SLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI

A0A5D3BYS1 Flocculation protein FLO11-like2.8e-2951.68Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQ------------------------------AKAKRTPAAIQIKVSNADGGKKVDK
        MDVK+  +NRY++EEVYVAQPKGF D  + DHVYKL+KALYGLKQ                              AK KRTPAA  +K++    GKKVD 
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQ------------------------------AKAKRTPAAIQIKVSNADGGKKVDK

Query:  SLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI
        + Y+SII +LLYL AS  DI +A+GVCARYQ  P  SHL  +K ILKYI
Subjt:  SLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI

A0A5D3DCC3 F5J5.11.7e-2647.62Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA----------------------------KAKRTPAAIQIKVSNADGGKKVDKSL
        MDVK+ F+N Y+ E+VYVAQPKGF D   P HVYKL KALYGLKQA                            + KRTPAA  +K++       +D  L
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA----------------------------KAKRTPAAIQIKVSNADGGKKVDKSL

Query:  YQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI
        Y+SIIRSLLYL AS  DI YA+G+CA++Q  P  SHL   K I+KY+
Subjt:  YQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.4e-0433.33Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQAKAKRTPAAIQIKVSNADGGKKVDKSLY---QSIIRSLLYLNASLSDIVYAIGVC
        MDVK  F+N  + EE+Y+  P+G   ++  D+V KL KA+YGLKQA         Q           VD+ +Y   +  I   +Y+   + D+V A G  
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQAKAKRTPAAIQIKVSNADGGKKVDKSLY---QSIIRSLLYLNASLSDIVYAIGVC

Query:  AR
         R
Subjt:  AR

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-0450Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA
        +DVK  F++  + EE+Y+ QP+GFE       V KL K+LYGLKQA
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA

P25600 Putative transposon Ty5-1 protein YCL074W6.2e-0547.83Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA
        MDV   F+N  + E +YV QP GF +   PD+V++L   +YGLKQA
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.0e-0754.35Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA
        +DV N F+   +T++VY++QP GF D   P++V KL+KALYGLKQA
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.2e-0537.84Show/hide
Query:  AKAKRTPAAIQIKVSNADGGKKVDKSLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI
        AK   TP A   K+S   G K  D + Y+ I+ SL YL  +  DI YA+   +++  +P E HL+  K IL+Y+
Subjt:  AKAKRTPAAIQIKVSNADGGKKVDKSLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYI

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.7e-0754.35Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA
        +DV N F+   +T+EVY++QP GF D   PD+V +L+KA+YGLKQA
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQA

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.1e-0442Show/hide
Query:  MDVKNVFVNRYITEEVYVAQPKGFE----DHAYPDHVYKLKKALYGLKQA
        +D+ N F+N  + EE+Y+  P G+     D   P+ V  LKK++YGLKQA
Subjt:  MDVKNVFVNRYITEEVYVAQPKGFE----DHAYPDHVYKLKKALYGLKQA

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 89.1e-0429.11Show/hide
Query:  GLKQAKAKRTPAAIQIKVSNADGGKKVDKSLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYIR
        GL   K    P    +  S   GG  VD   Y+ +I  L+YL  +  DI +A+   +++ + P  +H +    IL YI+
Subjt:  GLKQAKAKRTPAAIQIKVSNADGGKKVDKSLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLRYSKWILKYIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTAAAGAATGTGTTTGTCAATAGATATATTACAGAGGAAGTCTATGTTGCACAGCCTAAAGGTTTTGAAGATCATGCATATCCAGATCATGTATATAAACTGAA
GAAGGCTTTGTATGGTCTCAAACAGGCCAAGGCAAAACGTACTCCTGCTGCTATACAAATCAAAGTGTCTAATGCTGATGGTGGGAAGAAAGTCGATAAAAGTCTATATC
AAAGTATTATAAGGAGTCTATTGTATCTCAATGCAAGTCTCTCGGATATTGTCTATGCTATTGGTGTGTGTGCTCGTTATCAAGATGTTCCTCATGAATCTCACCTTCGT
TATTCTAAATGGATTCTAAAATATATTAGGAATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTAAAGAATGTGTTTGTCAATAGATATATTACAGAGGAAGTCTATGTTGCACAGCCTAAAGGTTTTGAAGATCATGCATATCCAGATCATGTATATAAACTGAA
GAAGGCTTTGTATGGTCTCAAACAGGCCAAGGCAAAACGTACTCCTGCTGCTATACAAATCAAAGTGTCTAATGCTGATGGTGGGAAGAAAGTCGATAAAAGTCTATATC
AAAGTATTATAAGGAGTCTATTGTATCTCAATGCAAGTCTCTCGGATATTGTCTATGCTATTGGTGTGTGTGCTCGTTATCAAGATGTTCCTCATGAATCTCACCTTCGT
TATTCTAAATGGATTCTAAAATATATTAGGAATTATTGA
Protein sequenceShow/hide protein sequence
MDVKNVFVNRYITEEVYVAQPKGFEDHAYPDHVYKLKKALYGLKQAKAKRTPAAIQIKVSNADGGKKVDKSLYQSIIRSLLYLNASLSDIVYAIGVCARYQDVPHESHLR
YSKWILKYIRNY