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Pay0021870 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021870
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibonuclease H
Genome locationchr08:10738700..10739086
RNA-Seq ExpressionPay0021870
SyntenyPay0021870
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033220.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]2.9e-5583.46Show/hide
Query:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK
        DAKLIPYNDYI  I QTFD ITFEHVP + NQVADALATL AMFNVAYSEEVQPIRMEKY+TPSYC+S+ER+PDGKPWYHDIKHY+AYREYP G  ENSK
Subjt:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK

Query:  STIRKLALKFFLSGAVLYKRNYDMTLL
         T+R+LA+KFFLSG VLYKRNYDMTLL
Subjt:  STIRKLALKFFLSGAVLYKRNYDMTLL

KAA0037720.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]9.5e-5481.1Show/hide
Query:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK
        DAKLIPYNDYI  +TQTFD +TFEH P + NQV DALATL  MFNVAYSEEVQPIRMEKY+TPSYC+S+EREPDGKPWYHDIKHY+AYREYP GA +NSK
Subjt:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK

Query:  STIRKLALKFFLSGAVLYKRNYDMTLL
         TI++LA+KFFLSG VLYKRNYDMTLL
Subjt:  STIRKLALKFFLSGAVLYKRNYDMTLL

TYK00092.1 protein NYNRIN-like [Cucumis melo var. makuwa]1.7e-5585.04Show/hide
Query:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK
        DAKLIPYNDYI  I QTFD ITFEHVP + NQVADALATL AMFNVAYSEEVQPIRMEKYETPSYC+S+EREPDGKPWYHDIKHY+ +REYP GA ENSK
Subjt:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK

Query:  STIRKLALKFFLSGAVLYKRNYDMTLL
         TIR+LA+KFFLSG VLYKRNYDMTLL
Subjt:  STIRKLALKFFLSGAVLYKRNYDMTLL

XP_016901811.1 PREDICTED: uncharacterized protein LOC107991417 [Cucumis melo]2.6e-67100Show/hide
Query:  MDAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENS
        MDAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENS
Subjt:  MDAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENS

Query:  KSTIRKLALKFFLSGAVLYKRNYDMTLL
        KSTIRKLALKFFLSGAVLYKRNYDMTLL
Subjt:  KSTIRKLALKFFLSGAVLYKRNYDMTLL

XP_016903163.1 PREDICTED: uncharacterized protein LOC107990337 [Cucumis melo]9.5e-5481.1Show/hide
Query:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK
        DAKLIPYNDYI  +TQTFD +TFEH P + NQV DALATL  MFNVAYSEEVQPIRMEKY+TPSYC+S+EREPDGKPWYHDIKHY+AYREYP GA +NSK
Subjt:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK

Query:  STIRKLALKFFLSGAVLYKRNYDMTLL
         TI++LA+KFFLSG VLYKRNYDMTLL
Subjt:  STIRKLALKFFLSGAVLYKRNYDMTLL

TrEMBL top hitse value%identityAlignment
A0A1S4E0Q7 uncharacterized protein LOC1079914171.2e-67100Show/hide
Query:  MDAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENS
        MDAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENS
Subjt:  MDAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENS

Query:  KSTIRKLALKFFLSGAVLYKRNYDMTLL
        KSTIRKLALKFFLSGAVLYKRNYDMTLL
Subjt:  KSTIRKLALKFFLSGAVLYKRNYDMTLL

A0A1S4E4K2 uncharacterized protein LOC1079903374.6e-5481.1Show/hide
Query:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK
        DAKLIPYNDYI  +TQTFD +TFEH P + NQV DALATL  MFNVAYSEEVQPIRMEKY+TPSYC+S+EREPDGKPWYHDIKHY+AYREYP GA +NSK
Subjt:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK

Query:  STIRKLALKFFLSGAVLYKRNYDMTLL
         TI++LA+KFFLSG VLYKRNYDMTLL
Subjt:  STIRKLALKFFLSGAVLYKRNYDMTLL

A0A5A7SQN1 Ribonuclease H1.4e-5583.46Show/hide
Query:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK
        DAKLIPYNDYI  I QTFD ITFEHVP + NQVADALATL AMFNVAYSEEVQPIRMEKY+TPSYC+S+ER+PDGKPWYHDIKHY+AYREYP G  ENSK
Subjt:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK

Query:  STIRKLALKFFLSGAVLYKRNYDMTLL
         T+R+LA+KFFLSG VLYKRNYDMTLL
Subjt:  STIRKLALKFFLSGAVLYKRNYDMTLL

A0A5A7T2W3 Putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H4.6e-5481.1Show/hide
Query:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK
        DAKLIPYNDYI  +TQTFD +TFEH P + NQV DALATL  MFNVAYSEEVQPIRMEKY+TPSYC+S+EREPDGKPWYHDIKHY+AYREYP GA +NSK
Subjt:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK

Query:  STIRKLALKFFLSGAVLYKRNYDMTLL
         TI++LA+KFFLSG VLYKRNYDMTLL
Subjt:  STIRKLALKFFLSGAVLYKRNYDMTLL

A0A5D3BMZ2 Protein NYNRIN-like8.3e-5685.04Show/hide
Query:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK
        DAKLIPYNDYI  I QTFD ITFEHVP + NQVADALATL AMFNVAYSEEVQPIRMEKYETPSYC+S+EREPDGKPWYHDIKHY+ +REYP GA ENSK
Subjt:  DAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSK

Query:  STIRKLALKFFLSGAVLYKRNYDMTLL
         TIR+LA+KFFLSG VLYKRNYDMTLL
Subjt:  STIRKLALKFFLSGAVLYKRNYDMTLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTAAATTGATCCCTTATAACGATTATATTTGCAAAATAACTCAAACTTTTGATTTGATAACATTCGAACATGTCCCATTGAAAAGGAACCAAGTTGCA
GATGCATTAGCCACTCTTTTTGCCATGTTTAATGTAGCTTACAGTGAAGAAGTTCAACCTATAAGGATGGAGAAGTATGAGACACCATCCTACTGTATAAGCATC
GAGCGAGAACCTGACGGTAAACCTTGGTATCATGATATTAAGCACTACCTTGCATATCGAGAGTATCCATTAGGGGCATTGGAAAATAGTAAAAGCACCATTAGG
AAGTTAGCCCTGAAGTTCTTTCTGAGTGGTGCAGTATTATACAAAAGAAATTATGATATGACTCTACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTAAATTGATCCCTTATAACGATTATATTTGCAAAATAACTCAAACTTTTGATTTGATAACATTCGAACATGTCCCATTGAAAAGGAACCAAGTTGCA
GATGCATTAGCCACTCTTTTTGCCATGTTTAATGTAGCTTACAGTGAAGAAGTTCAACCTATAAGGATGGAGAAGTATGAGACACCATCCTACTGTATAAGCATC
GAGCGAGAACCTGACGGTAAACCTTGGTATCATGATATTAAGCACTACCTTGCATATCGAGAGTATCCATTAGGGGCATTGGAAAATAGTAAAAGCACCATTAGG
AAGTTAGCCCTGAAGTTCTTTCTGAGTGGTGCAGTATTATACAAAAGAAATTATGATATGACTCTACTATGA
Protein sequenceShow/hide protein sequence
MDAKLIPYNDYICKITQTFDLITFEHVPLKRNQVADALATLFAMFNVAYSEEVQPIRMEKYETPSYCISIEREPDGKPWYHDIKHYLAYREYPLGALENSKSTIR
KLALKFFLSGAVLYKRNYDMTLL