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Pay0021924 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0021924
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Genome locationchr06:11755843..11758061
RNA-Seq ExpressionPay0021924
SyntenyPay0021924
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032957.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.5e-8572.77Show/hide
Query:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRS--------------------GYYYLVDVGYPNAEGFLTPYRGQRYH
        MDRRCFA+L HLLRT+ GLTLTEV+DVEE+VAMFLHI+AHDVKN VIQ EFMRS                    G   LVD GYPNA+GFL PYRGQRYH
Subjt:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRS--------------------GYYYLVDVGYPNAEGFLTPYRGQRYH

Query:  LQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIE
        LQK    ENAPSTSKEFF MKH SA NVI+RAF VLKGRWTIL+ KS+YPV+VQC TIL CCLL+NLINREMT FDI D+IDEVDSTHAT+AADDIHYIE
Subjt:  LQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIE

Query:  TSNEWTRWRNDLAKEMFSEWELRN
        TSNEWT+WR+DLA+EMF +WEL N
Subjt:  TSNEWTRWRNDLAKEMFSEWELRN

KAA0048373.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.8e-8462.36Show/hide
Query:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRS----------------------------------------------
        MDRRCF +LCHLLRTIGGLTLTEV+DVEE+VAMFLHILAHDVKN VIQ EFMRS                                              
Subjt:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRS----------------------------------------------

Query:  --------------------------GYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSH
                                  GYYYLVDVGYPNAEGFL PYRGQRYHLQ+ HGAENAP+TSKEFF MKHSSA NVIERAF VLKGRW IL+ KS+
Subjt:  --------------------------GYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSH

Query:  YPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSE
        Y V+VQC TIL CCL++NLINREM TFDIVDDIDEVDSTH TSA DDIHYIETSNEWTRWR+DL ++MFSE
Subjt:  YPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSE

KAA0068124.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-8561.96Show/hide
Query:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRS----------------------------------------------
        MDRRCFA+LCHLLRTI GLT TEV+DVEE+VAMFLHILAHDVKN VIQ EFMRS                                              
Subjt:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRS----------------------------------------------

Query:  --------------------------GYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSH
                                  GYYYLVD GYPNAEGFL PYRGQRYHLQ+  G ENAPSTSKEFF MKHSSA NVIERAF VLKGRW IL+ KS+
Subjt:  --------------------------GYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSH

Query:  YPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSEWELRN
        YPV+VQC TIL CCLL+NLINREMT FDI D+IDEVDSTHAT+AADDIHYIETSNEW++WR+DLA+EMF+EWELRN
Subjt:  YPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSEWELRN

XP_008456228.1 PREDICTED: uncharacterized protein LOC103496233 [Cucumis melo]2.1e-11198.04Show/hide
Query:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRSGYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTM
        MDRRCFAVLCHLLRTIGGL LTEVIDVEEIVAMFLHILAHDVKN VIQLEFMRSGYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTM
Subjt:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRSGYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTM

Query:  KHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSEW
        KHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLL+NLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWR+DLAKEMFSEW
Subjt:  KHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSEW

Query:  ELRN
        ELRN
Subjt:  ELRN

XP_008461892.1 PREDICTED: putative nuclease HARBI1 [Cucumis melo]6.7e-9484.92Show/hide
Query:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRSGYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTM
        MDRRCF +LCHLLRTIGGLTLTEV+DVEE+VAMFLHILAHDVKN VIQ EFMRSGYYYLVDVGYPNAEGFL PYRGQRYHLQ+ HGAENAP+TSKEFF M
Subjt:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRSGYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTM

Query:  KHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSE
        KHSSA NVIERAF VLKGRW IL+ KS+Y V+VQC TIL CCL++NLINREM TFDIVDDIDEVDSTH TSA DDIHYIETSNEWTRWR+DL ++MFSE
Subjt:  KHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSE

TrEMBL top hitse value%identityAlignment
A0A1S3C2B9 uncharacterized protein LOC1034962331.0e-11198.04Show/hide
Query:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRSGYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTM
        MDRRCFAVLCHLLRTIGGL LTEVIDVEEIVAMFLHILAHDVKN VIQLEFMRSGYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTM
Subjt:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRSGYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTM

Query:  KHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSEW
        KHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLL+NLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWR+DLAKEMFSEW
Subjt:  KHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSEW

Query:  ELRN
        ELRN
Subjt:  ELRN

A0A1S3CFM2 putative nuclease HARBI13.2e-9484.92Show/hide
Query:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRSGYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTM
        MDRRCF +LCHLLRTIGGLTLTEV+DVEE+VAMFLHILAHDVKN VIQ EFMRSGYYYLVDVGYPNAEGFL PYRGQRYHLQ+ HGAENAP+TSKEFF M
Subjt:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRSGYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTM

Query:  KHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSE
        KHSSA NVIERAF VLKGRW IL+ KS+Y V+VQC TIL CCL++NLINREM TFDIVDDIDEVDSTH TSA DDIHYIETSNEWTRWR+DL ++MFSE
Subjt:  KHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSE

A0A5A7TXL2 Putative nuclease HARBI11.4e-8462.36Show/hide
Query:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRS----------------------------------------------
        MDRRCF +LCHLLRTIGGLTLTEV+DVEE+VAMFLHILAHDVKN VIQ EFMRS                                              
Subjt:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRS----------------------------------------------

Query:  --------------------------GYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSH
                                  GYYYLVDVGYPNAEGFL PYRGQRYHLQ+ HGAENAP+TSKEFF MKHSSA NVIERAF VLKGRW IL+ KS+
Subjt:  --------------------------GYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSH

Query:  YPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSE
        Y V+VQC TIL CCL++NLINREM TFDIVDDIDEVDSTH TSA DDIHYIETSNEWTRWR+DL ++MFSE
Subjt:  YPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSE

A0A5A7VL29 Retrotransposon protein9.4e-8661.96Show/hide
Query:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRS----------------------------------------------
        MDRRCFA+LCHLLRTI GLT TEV+DVEE+VAMFLHILAHDVKN VIQ EFMRS                                              
Subjt:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRS----------------------------------------------

Query:  --------------------------GYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSH
                                  GYYYLVD GYPNAEGFL PYRGQRYHLQ+  G ENAPSTSKEFF MKHSSA NVIERAF VLKGRW IL+ KS+
Subjt:  --------------------------GYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSH

Query:  YPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSEWELRN
        YPV+VQC TIL CCLL+NLINREMT FDI D+IDEVDSTHAT+AADDIHYIETSNEW++WR+DLA+EMF+EWELRN
Subjt:  YPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSEWELRN

A0A5D3DE97 Putative nuclease HARBI17.2e-8672.77Show/hide
Query:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRS--------------------GYYYLVDVGYPNAEGFLTPYRGQRYH
        MDRRCFA+L HLLRT+ GLTLTEV+DVEE+VAMFLHI+AHDVKN VIQ EFMRS                    G   LVD GYPNA+GFL PYRGQRYH
Subjt:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRS--------------------GYYYLVDVGYPNAEGFLTPYRGQRYH

Query:  LQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIE
        LQK    ENAPSTSKEFF MKH SA NVI+RAF VLKGRWTIL+ KS+YPV+VQC TIL CCLL+NLINREMT FDI D+IDEVDSTHAT+AADDIHYIE
Subjt:  LQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIE

Query:  TSNEWTRWRNDLAKEMFSEWELRN
        TSNEWT+WR+DLA+EMF +WEL N
Subjt:  TSNEWTRWRNDLAKEMFSEWELRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein1.0e-0740.3Show/hide
Query:  YYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAE----NAPSTSKEFFTMKHSSAHNVIERAFDVLKGR
        YYLVD GYPN +G L PYR  R  + + H ++      P    E F   H+S  +VIER F + K +
Subjt:  YYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAE----NAPSTSKEFFTMKHSSAHNVIERAFDVLKGR

AT4G10890.1 unknown protein4.6e-0843.28Show/hide
Query:  YYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTIL
        YYLV+  YP   G+L P+R   YHL  + G    P T +E F  KH    +VI+R F V K +W IL
Subjt:  YYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTIL

AT5G28730.1 unknown protein6.8e-0434.78Show/hide
Query:  YYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQA
        YYLVD GY N  G+L PYR        R   E     S  F T+     HN+ +  FD +     ++QA
Subjt:  YYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQA

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.4e-1733.12Show/hide
Query:  YYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFD
        +YLVD G+ N   FL P+RG RYHLQ+  G    P T  E F ++H S  NVIER F + K R+ I ++   +  K Q   +LTC  L+N + +E  + D
Subjt:  YYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFD

Query:  IVDDIDEV----------DSTHATSAADDIHYIETSNE----WTRWRNDLAKEMFSE
          D  DEV           +   T+  D+   +E   +       WR  +A++M+ +
Subjt:  IVDDIDEV----------DSTHATSAADDIHYIETSNE----WTRWRNDLAKEMFSE

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)6.8e-1235.05Show/hide
Query:  GYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINRE
        G YY+VD  YPN  GF+ PY G          + N+   +KE F  +H   H  I R F  LK R+ IL +   YP++ Q   ++  C L+N +  E
Subjt:  GYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIERAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINRE

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.6e-0340Show/hide
Query:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRSG
        MD+  F  LC LL+T G L  T  I +E  +A+FL I+ H+++   +Q  F  SG
Subjt:  MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGAAGATGTTTCGCCGTTCTCTGCCACCTATTGAGGACCATTGGTGGACTAACGTTGACGGAAGTCATCGATGTTGAGGAGATAGTAGCAATGTTCCTCCACAT
TCTTGCGCACGACGTGAAAAACCATGTCATTCAACTGGAGTTCATGCGATCGGGCTATTACTACCTGGTTGATGTCGGGTACCCAAATGCAGAAGGTTTCCTCACACCAT
ATAGAGGCCAACGCTACCACTTGCAGAAACGGCATGGTGCTGAAAATGCACCTTCAACGTCGAAAGAGTTCTTCACTATGAAGCATTCTTCTGCTCATAATGTAATCGAA
AGAGCATTCGACGTCTTGAAGGGTCGATGGACAATACTGCAGGCAAAGTCACACTACCCTGTAAAAGTCCAATGCCATACGATACTCACATGTTGTCTCCTCTACAACCT
TATCAATAGAGAGATGACAACCTTTGATATAGTGGACGACATAGATGAGGTTGATTCCACCCATGCGACTAGTGCCGCCGATGACATACATTACATAGAGACGTCCAATG
AGTGGACTCGGTGGAGGAACGACCTTGCTAAAGAAATGTTTAGTGAATGGGAGTTGCGTAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACCGAAGATGTTTCGCCGTTCTCTGCCACCTATTGAGGACCATTGGTGGACTAACGTTGACGGAAGTCATCGATGTTGAGGAGATAGTAGCAATGTTCCTCCACAT
TCTTGCGCACGACGTGAAAAACCATGTCATTCAACTGGAGTTCATGCGATCGGGCTATTACTACCTGGTTGATGTCGGGTACCCAAATGCAGAAGGTTTCCTCACACCAT
ATAGAGGCCAACGCTACCACTTGCAGAAACGGCATGGTGCTGAAAATGCACCTTCAACGTCGAAAGAGTTCTTCACTATGAAGCATTCTTCTGCTCATAATGTAATCGAA
AGAGCATTCGACGTCTTGAAGGGTCGATGGACAATACTGCAGGCAAAGTCACACTACCCTGTAAAAGTCCAATGCCATACGATACTCACATGTTGTCTCCTCTACAACCT
TATCAATAGAGAGATGACAACCTTTGATATAGTGGACGACATAGATGAGGTTGATTCCACCCATGCGACTAGTGCCGCCGATGACATACATTACATAGAGACGTCCAATG
AGTGGACTCGGTGGAGGAACGACCTTGCTAAAGAAATGTTTAGTGAATGGGAGTTGCGTAACTAG
Protein sequenceShow/hide protein sequence
MDRRCFAVLCHLLRTIGGLTLTEVIDVEEIVAMFLHILAHDVKNHVIQLEFMRSGYYYLVDVGYPNAEGFLTPYRGQRYHLQKRHGAENAPSTSKEFFTMKHSSAHNVIE
RAFDVLKGRWTILQAKSHYPVKVQCHTILTCCLLYNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRNDLAKEMFSEWELRN