; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0022036 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022036
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr12:2930576..2932178
RNA-Seq ExpressionPay0022036
SyntenyPay0022036
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR005135 - Endonuclease/exonuclease/phosphatase
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040038.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.8e-8380.54Show/hide
Query:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE
        MWDDLRFNV+DFIEG FSLSI IN PDGP  SAWWL AIYGP+GGRNR SFWAELLDLKN  SP WLLAGDFNVVRFSSETS QNP  +SMR FN FIS+
Subjt:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE

Query:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLK
        SNLIDPPLSNAK+TWSNLR QP+LSRIDRFLYT  WENLF+A YSKTLSRVTSDHFPI LE+S +SWGP PF+ INVHLK   LK
Subjt:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLK
KAA0044334.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.2e-9286.77Show/hide
Query:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE
        MWDDLRFNVSDFIEG FSLSIKINIPD PPCSAWWL AIYGPAGGRNRNSFWAELLDLKN  SP WLLAGDFNVVRFS ETS QN RHYSMRKFNNFIS+
Subjt:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE

Query:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTLK
        SNLIDPPLSNAKYTWSNLR QPILSRIDRFLYT+GWENLF+A YSKTLSRVTSDHFPIILE+ST+SWGPLPFR INVHLK    K   +
Subjt:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTLK
KAA0067709.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.4e-109100Show/hide
Query:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE
        MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE
Subjt:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE

Query:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTLKD
        SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTLKD
Subjt:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTLKD
TYK06777.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.7e-8177.13Show/hide
Query:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE
        MWDDLRFNV+DFIEG FSLSI IN PDGP  SAWWL AIYGP+GGRNR SFWAELLDLKN  SP WLLAGDFNVVRF SETS QNP  +SMR FN FI++
Subjt:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE

Query:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTL
        SNLIDPPLSNAK+TWSNLR  P+LSRIDRFLYT  WENLF+A YSKTLSRVTSDHFPI+LE+S +SWGP PF+ INVHLK    K  +
Subjt:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTL
TYK24536.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.0e-8178.92Show/hide
Query:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE
        MWDDLRF+V+D IEG FSLSI IN PDGP  SAWWL AIYGP+GGRNR SFWAELLDLKN  SP WLLAGDFN VRFSSETS QNP  +SMR FN FIS+
Subjt:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE

Query:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLK
        SNLIDPPLSNAK+TWSNLR QP+LSRIDRFLYT  WENLF+A YSKTLSRVTSDHFPI LE+S +SWGP PF+FINVHLK    K
Subjt:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLK
TrEMBL top hitse value%identityAlignment
A0A5A7TAQ1 LINE-1 retrotransposable element ORF2 protein8.9e-8480.54Show/hide
Query:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE
        MWDDLRFNV+DFIEG FSLSI IN PDGP  SAWWL AIYGP+GGRNR SFWAELLDLKN  SP WLLAGDFNVVRFSSETS QNP  +SMR FN FIS+
Subjt:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE

Query:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLK
        SNLIDPPLSNAK+TWSNLR QP+LSRIDRFLYT  WENLF+A YSKTLSRVTSDHFPI LE+S +SWGP PF+ INVHLK   LK
Subjt:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLK
A0A5A7TMG5 LINE-1 retrotransposable element ORF2 protein1.1e-9286.77Show/hide
Query:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE
        MWDDLRFNVSDFIEG FSLSIKINIPD PPCSAWWL AIYGPAGGRNRNSFWAELLDLKN  SP WLLAGDFNVVRFS ETS QN RHYSMRKFNNFIS+
Subjt:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE

Query:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTLK
        SNLIDPPLSNAKYTWSNLR QPILSRIDRFLYT+GWENLF+A YSKTLSRVTSDHFPIILE+ST+SWGPLPFR INVHLK    K   +
Subjt:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTLK
A0A5A7VRD2 LINE-1 retrotransposable element ORF2 protein3.6e-109100Show/hide
Query:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE
        MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE
Subjt:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE

Query:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTLKD
        SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTLKD
Subjt:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTLKD
A0A5D3C4J1 LINE-1 retrotransposable element ORF2 protein8.4e-8277.13Show/hide
Query:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE
        MWDDLRFNV+DFIEG FSLSI IN PDGP  SAWWL AIYGP+GGRNR SFWAELLDLKN  SP WLLAGDFNVVRF SETS QNP  +SMR FN FI++
Subjt:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE

Query:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTL
        SNLIDPPLSNAK+TWSNLR  P+LSRIDRFLYT  WENLF+A YSKTLSRVTSDHFPI+LE+S +SWGP PF+ INVHLK    K  +
Subjt:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTL
A0A5D3DLM2 LINE-1 retrotransposable element ORF2 protein4.9e-8278.92Show/hide
Query:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE
        MWDDLRF+V+D IEG FSLSI IN PDGP  SAWWL AIYGP+GGRNR SFWAELLDLKN  SP WLLAGDFN VRFSSETS QNP  +SMR FN FIS+
Subjt:  MWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLAIYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISE

Query:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLK
        SNLIDPPLSNAK+TWSNLR QP+LSRIDRFLYT  WENLF+A YSKTLSRVTSDHFPI LE+S +SWGP PF+FINVHLK    K
Subjt:  SNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.6e-0528.57Show/hide
Query:  LLAGDFNVVRFSSETSVQNPRHYS----------MRKFNNFISESNLIDPPLSNAKYTWSNLR-TQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDH
        +L GDF+ +  +S+       HYS          + +F N + +S+L+D P     YTWSN +   PI+ ++DR +    W + F +  +       SDH
Subjt:  LLAGDFNVVRFSSETSVQNPRHYS----------MRKFNNFISESNLIDPPLSNAKYTWSNLR-TQPILSRIDRFLYTMGWENLFSARYSKTLSRVTSDH

Query:  FPIIL
         P I+
Subjt:  FPIIL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTGTAAGCTGGAATACTAGAGGGTTAAACTCTCCCTCCAAAAGAGTTCAAATAAAAAATCTTATTTCCCGTTATCTTCCTGACTTTGTGATTTTAGTTGAGAC
TAAACTGACTGATGTTACAAAAAAAATTGTTAAATCTCTGTGGAGCTCTATTAGTGTAAATTGGTGTTTTTTAAGTGCTAATGGCAATTCGGAGGGAATCATTATCATGT
GGGATGATCTTAGATTCAATGTGTCTGATTTCATTGAAGGCGTTTTCTCATTATCCATAAAAATCAACATTCCTGATGGGCCTCCTTGTTCGGCCTGGTGGCTGTTGGCT
ATATATGGGCCTGCTGGTGGTAGAAACAGAAATTCCTTTTGGGCTGAACTTCTGGACCTCAAAAATATTTACTCTCCAAATTGGCTTTTAGCGGGAGACTTTAACGTTGT
GAGATTCTCCTCTGAGACGTCCGTCCAAAATCCTAGACATTACAGTATGAGGAAATTTAACAACTTCATCTCCGAAAGCAATCTCATTGACCCGCCTCTCTCAAATGCAA
AATATACCTGGTCTAACCTCAGAACCCAGCCGATTCTCTCCAGAATTGACAGATTTTTATATACAATGGGATGGGAAAATTTATTCTCTGCTCGCTATTCAAAAACCCTT
TCCAGAGTTACCTCAGATCATTTCCCGATCATTCTTGAAACCTCCACGGTTAGTTGGGGTCCTCTGCCCTTCAGATTTATAAACGTGCACTTAAAGAGCCGTGGTTTAAA
AACAACTTTAAAAGATGATCATTGCCAAAGTCATTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATTGTAAGCTGGAATACTAGAGGGTTAAACTCTCCCTCCAAAAGAGTTCAAATAAAAAATCTTATTTCCCGTTATCTTCCTGACTTTGTGATTTTAGTTGAGAC
TAAACTGACTGATGTTACAAAAAAAATTGTTAAATCTCTGTGGAGCTCTATTAGTGTAAATTGGTGTTTTTTAAGTGCTAATGGCAATTCGGAGGGAATCATTATCATGT
GGGATGATCTTAGATTCAATGTGTCTGATTTCATTGAAGGCGTTTTCTCATTATCCATAAAAATCAACATTCCTGATGGGCCTCCTTGTTCGGCCTGGTGGCTGTTGGCT
ATATATGGGCCTGCTGGTGGTAGAAACAGAAATTCCTTTTGGGCTGAACTTCTGGACCTCAAAAATATTTACTCTCCAAATTGGCTTTTAGCGGGAGACTTTAACGTTGT
GAGATTCTCCTCTGAGACGTCCGTCCAAAATCCTAGACATTACAGTATGAGGAAATTTAACAACTTCATCTCCGAAAGCAATCTCATTGACCCGCCTCTCTCAAATGCAA
AATATACCTGGTCTAACCTCAGAACCCAGCCGATTCTCTCCAGAATTGACAGATTTTTATATACAATGGGATGGGAAAATTTATTCTCTGCTCGCTATTCAAAAACCCTT
TCCAGAGTTACCTCAGATCATTTCCCGATCATTCTTGAAACCTCCACGGTTAGTTGGGGTCCTCTGCCCTTCAGATTTATAAACGTGCACTTAAAGAGCCGTGGTTTAAA
AACAACTTTAAAAGATGATCATTGCCAAAGTCATTGCTGA
Protein sequenceShow/hide protein sequence
MKIVSWNTRGLNSPSKRVQIKNLISRYLPDFVILVETKLTDVTKKIVKSLWSSISVNWCFLSANGNSEGIIIMWDDLRFNVSDFIEGVFSLSIKINIPDGPPCSAWWLLA
IYGPAGGRNRNSFWAELLDLKNIYSPNWLLAGDFNVVRFSSETSVQNPRHYSMRKFNNFISESNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENLFSARYSKTL
SRVTSDHFPIILETSTVSWGPLPFRFINVHLKSRGLKTTLKDDHCQSHC