; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0022046 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022046
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag-pol polyprotein
Genome locationchr11:23908139..23909684
RNA-Seq ExpressionPay0022046
SyntenyPay0022046
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031683.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.8e-10190.09Show/hide
Query:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS
        MYLGERGYSRGETDKTL IN+TSTDLIVAQIYVDDIIFGGFPKTLVNNFINIM SEFEMSLVGELSCFLGLQIKQRSEGMF+SQEKYAKNLVKKFGL QS
Subjt:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS

Query:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA
        QYK+TPAATH KITKDT+GTAVDHKLYRSMIGS LYL AS PDI YAV IC RYQSDP TSHLNAVKRIIKYVHGTTDF ILYSYDT SKLVGYCDA W 
Subjt:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA

Query:  GSADDRKSTSGG
        GSADDRK+T GG
Subjt:  GSADDRKSTSGG

KAA0054435.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.4e-9888.68Show/hide
Query:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS
        MYLGER YSRGETDKTL INRTST+LIVAQIYVDDIIFGGFPKTLV+NFINIM SEFEMSLVGELSCFLGLQIKQRSEGMF+SQEKYAKNLVKKFGLDQS
Subjt:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS

Query:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA
        Q+KRTPA THAKITKD VGT VDHKLYRSMIGS LYL  SRPDIAY V ICARYQSD  TSHLNA+KRIIKYVHGTTDFGILYSYDT S+LVGY +AD A
Subjt:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA

Query:  GSADDRKSTSGG
        GSADDRK TSGG
Subjt:  GSADDRKSTSGG

KAA0054623.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.0e-16584.86Show/hide
Query:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS
        MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS
Subjt:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS

Query:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA
        QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA
Subjt:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA

Query:  GSADDRKSTSGG-----------------------------------------------------LKKVTAPDVVPQKFVDHVLSDHSQESSSSEG--SP
        GSADDRKSTSGG                                                     +KKVTAPDVVPQKFVDHVLSDHSQESSSSEG  SP
Subjt:  GSADDRKSTSGG-----------------------------------------------------LKKVTAPDVVPQKFVDHVLSDHSQESSSSEG--SP

Query:  ISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS
        ISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS
Subjt:  ISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS

TYK27585.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.6e-14178.47Show/hide
Query:  YSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPA
        + +GETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTL                           IKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPA
Subjt:  YSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPA

Query:  ATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRK
        ATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRK
Subjt:  ATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRK

Query:  STSGG-------------------------------------------LKKVTAPDVVPQKFVDHVLSDHSQESSSSEG--SPISDIAAPSDSHAAPHAA
        STSGG                                           +KKVTAPDVVPQKFVDHVLSDHSQESSSSEG  SPISDIAAPSDSHAAPHAA
Subjt:  STSGG-------------------------------------------LKKVTAPDVVPQKFVDHVLSDHSQESSSSEG--SPISDIAAPSDSHAAPHAA

Query:  SNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS
        SNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS
Subjt:  SNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS

XP_016901935.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]5.4e-175100Show/hide
Query:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS
        MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS
Subjt:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS

Query:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA
        QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA
Subjt:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA

Query:  GSADDRKSTSGGLKKVTAPDVVPQKFVDHVLSDHSQESSSSEGSPISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVA
        GSADDRKSTSGGLKKVTAPDVVPQKFVDHVLSDHSQESSSSEGSPISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVA
Subjt:  GSADDRKSTSGGLKKVTAPDVVPQKFVDHVLSDHSQESSSSEGSPISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVA

Query:  DTVDPKCSTRNSINS
        DTVDPKCSTRNSINS
Subjt:  DTVDPKCSTRNSINS

TrEMBL top hitse value%identityAlignment
A0A1S4E1S5 uncharacterized mitochondrial protein AtMg00810-like2.6e-175100Show/hide
Query:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS
        MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS
Subjt:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS

Query:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA
        QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA
Subjt:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA

Query:  GSADDRKSTSGGLKKVTAPDVVPQKFVDHVLSDHSQESSSSEGSPISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVA
        GSADDRKSTSGGLKKVTAPDVVPQKFVDHVLSDHSQESSSSEGSPISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVA
Subjt:  GSADDRKSTSGGLKKVTAPDVVPQKFVDHVLSDHSQESSSSEGSPISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVA

Query:  DTVDPKCSTRNSINS
        DTVDPKCSTRNSINS
Subjt:  DTVDPKCSTRNSINS

A0A5A7UF87 Putative mitochondrial protein4.9e-16684.86Show/hide
Query:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS
        MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS
Subjt:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS

Query:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA
        QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA
Subjt:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA

Query:  GSADDRKSTSGG-----------------------------------------------------LKKVTAPDVVPQKFVDHVLSDHSQESSSSEG--SP
        GSADDRKSTSGG                                                     +KKVTAPDVVPQKFVDHVLSDHSQESSSSEG  SP
Subjt:  GSADDRKSTSGG-----------------------------------------------------LKKVTAPDVVPQKFVDHVLSDHSQESSSSEG--SP

Query:  ISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS
        ISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS
Subjt:  ISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS

A0A5D3BY43 Gag-pol polyprotein8.5e-10290.09Show/hide
Query:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS
        MYLGERGYSRGETDKTL IN+TSTDLIVAQIYVDDIIFGGFPKTLVNNFINIM SEFEMSLVGELSCFLGLQIKQRSEGMF+SQEKYAKNLVKKFGL QS
Subjt:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS

Query:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA
        QYK+TPAATH KITKDT+GTAVDHKLYRSMIGS LYL AS PDI YAV IC RYQSDP TSHLNAVKRIIKYVHGTTDF ILYSYDT SKLVGYCDA W 
Subjt:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA

Query:  GSADDRKSTSGG
        GSADDRK+T GG
Subjt:  GSADDRKSTSGG

A0A5D3CS19 Gag-pol polyprotein6.7e-9988.68Show/hide
Query:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS
        MYLGER YSRGETDKTL INRTST+LIVAQIYVDDIIFGGFPKTLV+NFINIM SEFEMSLVGELSCFLGLQIKQRSEGMF+SQEKYAKNLVKKFGLDQS
Subjt:  MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQS

Query:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA
        Q+KRTPA THAKITKD VGT VDHKLYRSMIGS LYL  SRPDIAY V ICARYQSD  TSHLNA+KRIIKYVHGTTDFGILYSYDT S+LVGY +AD A
Subjt:  QYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWA

Query:  GSADDRKSTSGG
        GSADDRK TSGG
Subjt:  GSADDRKSTSGG

A0A5D3DWA8 Putative mitochondrial protein3.2e-14178.47Show/hide
Query:  YSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPA
        + +GETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTL                           IKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPA
Subjt:  YSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPA

Query:  ATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRK
        ATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRK
Subjt:  ATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRK

Query:  STSGG-------------------------------------------LKKVTAPDVVPQKFVDHVLSDHSQESSSSEG--SPISDIAAPSDSHAAPHAA
        STSGG                                           +KKVTAPDVVPQKFVDHVLSDHSQESSSSEG  SPISDIAAPSDSHAAPHAA
Subjt:  STSGG-------------------------------------------LKKVTAPDVVPQKFVDHVLSDHSQESSSSEG--SPISDIAAPSDSHAAPHAA

Query:  SNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS
        SNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS
Subjt:  SNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.3e-2432.47Show/hide
Query:  IVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGTAVD-HK
        I   +YVDD++      T +NNF   +  +F M+ + E+  F+G++I+ + + +++SQ  Y K ++ KF ++      TP    +KI  + + +  D + 
Subjt:  IVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGTAVD-HK

Query:  LYRSMIGSHLYLK-ASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTF--SKLVGYCDADWAGSADDRKSTSGGLKKV
          RS+IG  +Y+   +RPD+  AV I +RY S   +     +KR+++Y+ GT D  +++  +    +K++GY D+DWAGS  DRKST+G L K+
Subjt:  LYRSMIGSHLYLK-ASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTF--SKLVGYCDADWAGSADDRKSTSGGLKKV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.9e-2431.98Show/hide
Query:  YLGERGYSRGETDKTLLINRTS-TDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQI--KQRSEGMFMSQEKYAKNLVKKFGLD
        ++  + Y +  +D  +   R S  + I+  +YVDD++  G  K L+      ++  F+M  +G     LG++I  ++ S  +++SQEKY + ++++F + 
Subjt:  YLGERGYSRGETDKTLLINRTS-TDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQI--KQRSEGMFMSQEKYAKNLVKKFGLD

Query:  QSQYKRTPAATHAKITKDTVGTAVDHK------LYRSMIGSHLY-LKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKL
         ++   TP A H K++K    T V+ K       Y S +GS +Y +  +RPDIA+AV + +R+  +P   H  AVK I++Y+ GTT   + +   +   L
Subjt:  QSQYKRTPAATHAKITKDTVGTAVDHK------LYRSMIGSHLY-LKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKL

Query:  VGYCDADWAGSADDRKSTSGGL
         GY DAD AG  D+RKS++G L
Subjt:  VGYCDADWAGSADDRKSTSGGL

P92519 Uncharacterized mitochondrial protein AtMg008102.1e-2534.81Show/hide
Query:  IYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGTAVDHKLYRSM
        +YVDDI+  G   TL+N  I  ++S F M  +G +  FLG+QIK    G+F+SQ KYA+ ++   G+   +   TP       +  T     D   +RS+
Subjt:  IYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGTAVDHKLYRSM

Query:  IGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRKSTSG
        +G+  YL  +RPDI+YAV I  +   +P  +  + +KR+++YV GT   G+    ++   +  +CD+DWAG    R+ST+G
Subjt:  IGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRKSTSG

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.3e-2732.86Show/hide
Query:  YLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQ
        YL   G+    +D +L + +    ++   +YVDDI+  G   TL++N ++ ++  F +    EL  FLG++ K+   G+ +SQ +Y  +L+ +  +  ++
Subjt:  YLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQ

Query:  YKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAG
           TP A   K++  +     D   YR ++GS  YL  +RPDI+YAV   +++   P   HL A+KRI++Y+ GT + GI         L  Y DADWAG
Subjt:  YKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAG

Query:  SADDRKSTSG
          DD  ST+G
Subjt:  SADDRKSTSG

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.2e-2832.86Show/hide
Query:  YLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQ
        YL   G+    +D +L + +    +I   +YVDDI+  G    L+ + ++ ++  F +    +L  FLG++ K+  +G+ +SQ +Y  +L+ +  +  ++
Subjt:  YLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQ

Query:  YKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAG
           TP AT  K+T  +     D   YR ++GS  YL  +RPD++YAV   ++Y   P   H NA+KR+++Y+ GT D GI         L  Y DADWAG
Subjt:  YKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAG

Query:  SADDRKSTSG
          DD  ST+G
Subjt:  SADDRKSTSG

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.0e-2431.22Show/hide
Query:  GYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTP
        G+ +  +D T  +  T+T  +   +YVDDII        V+   + + S F++  +G L  FLGL+I + + G+ + Q KYA +L+ + GL   +    P
Subjt:  GYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTP

Query:  AATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDR
               +  + G  VD K YR +IG  +YL+ +R DI++AV   +++   P  +H  AV +I+ Y+ GT   G+ YS     +L  + DA +    D R
Subjt:  AATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDR

Query:  KSTSG
        +ST+G
Subjt:  KSTSG

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.7e-0935.06Show/hide
Query:  LYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRKSTSG
        +YL  +RPD+ +AV   +++ S   T+ + AV +++ YV GT   G+ YS  +  +L  + D+DWA   D R+S +G
Subjt:  LYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRKSTSG

ATMG00810.1 DNA/RNA polymerases superfamily protein1.5e-2634.81Show/hide
Query:  IYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGTAVDHKLYRSM
        +YVDDI+  G   TL+N  I  ++S F M  +G +  FLG+QIK    G+F+SQ KYA+ ++   G+   +   TP       +  T     D   +RS+
Subjt:  IYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGTAVDHKLYRSM

Query:  IGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRKSTSG
        +G+  YL  +RPDI+YAV I  +   +P  +  + +KR+++YV GT   G+    ++   +  +CD+DWAG    R+ST+G
Subjt:  IGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRKSTSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCTTGGTGAAAGAGGATATTCCAGGGGTGAGACTGATAAGACACTACTCATAAATAGAACCAGCACTGATCTCATCGTAGCTCAAATTTATGTTGATGACATCAT
CTTTGGTGGATTTCCTAAAACACTTGTTAATAATTTTATTAACATAATGACATCAGAATTCGAAATGAGCCTAGTAGGTGAACTGTCTTGCTTTCTGGGGTTGCAGATCA
AACAGAGAAGTGAGGGAATGTTTATGTCACAAGAGAAGTATGCCAAGAACTTAGTTAAGAAGTTTGGTCTGGATCAGTCACAGTACAAAAGGACTCCAGCTGCGACTCAT
GCTAAAATTACCAAGGATACGGTAGGTACTGCAGTCGATCATAAATTGTACAGAAGCATGATTGGAAGCCATTTATATTTGAAAGCAAGCAGACCTGATATTGCTTATGC
TGTGGAAATATGTGCTCGGTATCAGTCAGATCCATGTACCTCTCATTTAAATGCTGTTAAACGAATAATAAAATATGTTCACGGAACAACTGATTTCGGGATTCTGTACT
CCTACGATACATTCTCCAAGCTGGTGGGATATTGTGATGCAGACTGGGCAGGTTCTGCTGATGATCGGAAAAGCACTTCTGGTGGATTGAAAAAGGTTACTGCCCCTGAT
GTTGTTCCTCAAAAATTTGTTGATCATGTCTTGTCTGATCACTCTCAAGAGAGTTCGTCGTCTGAGGGTTCTCCTATTTCGGACATCGCTGCTCCGTCTGACTCACATGC
TGCTCCGCATGCTGCATCTAATGTACCTGAAGGAGGAACTGAAGCTCGAAGTGAAGAAACCCCTCTTGATAATGTCGACGGTGTTGAGCCTGTTGCCCCTGGTGATCATA
ATGACGAAGTTCCTGTTGCTGATACTGTCGATCCAAAGTGCTCAACAAGAAACTCCATCAATTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATCTTGGTGAAAGAGGATATTCCAGGGGTGAGACTGATAAGACACTACTCATAAATAGAACCAGCACTGATCTCATCGTAGCTCAAATTTATGTTGATGACATCAT
CTTTGGTGGATTTCCTAAAACACTTGTTAATAATTTTATTAACATAATGACATCAGAATTCGAAATGAGCCTAGTAGGTGAACTGTCTTGCTTTCTGGGGTTGCAGATCA
AACAGAGAAGTGAGGGAATGTTTATGTCACAAGAGAAGTATGCCAAGAACTTAGTTAAGAAGTTTGGTCTGGATCAGTCACAGTACAAAAGGACTCCAGCTGCGACTCAT
GCTAAAATTACCAAGGATACGGTAGGTACTGCAGTCGATCATAAATTGTACAGAAGCATGATTGGAAGCCATTTATATTTGAAAGCAAGCAGACCTGATATTGCTTATGC
TGTGGAAATATGTGCTCGGTATCAGTCAGATCCATGTACCTCTCATTTAAATGCTGTTAAACGAATAATAAAATATGTTCACGGAACAACTGATTTCGGGATTCTGTACT
CCTACGATACATTCTCCAAGCTGGTGGGATATTGTGATGCAGACTGGGCAGGTTCTGCTGATGATCGGAAAAGCACTTCTGGTGGATTGAAAAAGGTTACTGCCCCTGAT
GTTGTTCCTCAAAAATTTGTTGATCATGTCTTGTCTGATCACTCTCAAGAGAGTTCGTCGTCTGAGGGTTCTCCTATTTCGGACATCGCTGCTCCGTCTGACTCACATGC
TGCTCCGCATGCTGCATCTAATGTACCTGAAGGAGGAACTGAAGCTCGAAGTGAAGAAACCCCTCTTGATAATGTCGACGGTGTTGAGCCTGTTGCCCCTGGTGATCATA
ATGACGAAGTTCCTGTTGCTGATACTGTCGATCCAAAGTGCTCAACAAGAAACTCCATCAATTCCTAA
Protein sequenceShow/hide protein sequence
MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATH
AKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRKSTSGGLKKVTAPD
VVPQKFVDHVLSDHSQESSSSEGSPISDIAAPSDSHAAPHAASNVPEGGTEARSEETPLDNVDGVEPVAPGDHNDEVPVADTVDPKCSTRNSINS