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Pay0022059 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022059
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr03:13550456..13551141
RNA-Seq ExpressionPay0022059
SyntenyPay0022059
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.7e-5867.53Show/hide
Query:  EDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQN--GVKDCEFLRLTQG-----
        E+QLLDRLAQRL+SG  SAQSDPEKK+GIERLK LG  TF GT NPAD EAWL LIEK FRV RC EDRKVELA+FLLQN  G K  ++ R+ +      
Subjt:  EDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQN--GVKDCEFLRLTQG-----

Query:  ----SMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREASKNVRTFSSSMHHN
            SMTV +YEKKYTELSKYATRVIEDE +R                 +CADWNDFSKLVE ALR+EKSLNERKRERE SKNVRTFSSSMH N
Subjt:  ----SMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREASKNVRTFSSSMHHN

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-6072.73Show/hide
Query:  EDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC----EFLRLTQGSMT
        E+QLLDRLAQRLVSG  SAQSDPEKK+G ERLK LG  TFAGT NP DVEAWL LIEK FRV R LEDRKVELAAFLLQN  +D     E  R T G+MT
Subjt:  EDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC----EFLRLTQGSMT

Query:  VAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREASKNVRTFSSSMHHN
        VAEYEKKYTELSKYATRVI DE +R                 +CADWNDFSKLVEVALR+EKSLNERKREREASKN+RTFSSSMH N
Subjt:  VAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREASKNVRTFSSSMHHN

KAA0039476.1 uncharacterized protein E6C27_scaffold64G002900 [Cucumis melo var. makuwa]3.4e-5460.75Show/hide
Query:  AQRLVSGNG-SAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC----------------------
        A+    G+G SAQSDP+KK+GIERLK LG  TFAGT NP DVEAWL LIEK FRV RC EDRKVELAAFLLQNG +D                       
Subjt:  AQRLVSGNG-SAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC----------------------

Query:  ----------------EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREA
                        EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDE +R                 +CADWNDFSKLVE ALR+ KSLNERKRERE 
Subjt:  ----------------EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREA

Query:  SKNVRTFSSSMHHN
        SKNVRTFSSSMH N
Subjt:  SKNVRTFSSSMHHN

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]2.1e-5962.9Show/hide
Query:  EDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC---------------
        E+QLLDRLAQRLVSG  SAQSDPEKK+G ERLK LG  TFAGT NP DVEAWL LIEK FRV R LEDRKVELAAFLLQN  +D                
Subjt:  EDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC---------------

Query:  -----------------------EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNE
                               EF+RLTQG+MTVAEYEKKYTELSKYATRVI DE +R                 +CADWNDFSKLVEVALR+EKSLNE
Subjt:  -----------------------EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNE

Query:  RKREREASKNVRTFSSSMHHN
        RKREREASKN+RTFSSSMH N
Subjt:  RKREREASKNVRTFSSSMHHN

TYK15233.1 uncharacterized protein E5676_scaffold892G00030 [Cucumis melo var. makuwa]3.4e-5460.75Show/hide
Query:  AQRLVSGNG-SAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC----------------------
        A+    G+G SAQSDP+KK+GIERLK LG  TFAGT NP DVEAWL LIEK FRV RC EDRKVELAAFLLQNG +D                       
Subjt:  AQRLVSGNG-SAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC----------------------

Query:  ----------------EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREA
                        EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDE +R                 +CADWNDFSKLVE ALR+ KSLNERKRERE 
Subjt:  ----------------EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREA

Query:  SKNVRTFSSSMHHN
        SKNVRTFSSSMH N
Subjt:  SKNVRTFSSSMHHN

TrEMBL top hitse value%identityAlignment
A0A5A7T1M0 Reverse transcriptase5.3e-6172.73Show/hide
Query:  EDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC----EFLRLTQGSMT
        E+QLLDRLAQRLVSG  SAQSDPEKK+G ERLK LG  TFAGT NP DVEAWL LIEK FRV R LEDRKVELAAFLLQN  +D     E  R T G+MT
Subjt:  EDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC----EFLRLTQGSMT

Query:  VAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREASKNVRTFSSSMHHN
        VAEYEKKYTELSKYATRVI DE +R                 +CADWNDFSKLVEVALR+EKSLNERKREREASKN+RTFSSSMH N
Subjt:  VAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREASKNVRTFSSSMHHN

A0A5A7TBS0 CCHC-type domain-containing protein1.7e-5460.75Show/hide
Query:  AQRLVSGNG-SAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC----------------------
        A+    G+G SAQSDP+KK+GIERLK LG  TFAGT NP DVEAWL LIEK FRV RC EDRKVELAAFLLQNG +D                       
Subjt:  AQRLVSGNG-SAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC----------------------

Query:  ----------------EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREA
                        EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDE +R                 +CADWNDFSKLVE ALR+ KSLNERKRERE 
Subjt:  ----------------EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREA

Query:  SKNVRTFSSSMHHN
        SKNVRTFSSSMH N
Subjt:  SKNVRTFSSSMHHN

A0A5D3BB91 Reverse transcriptase1.0e-5962.9Show/hide
Query:  EDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC---------------
        E+QLLDRLAQRLVSG  SAQSDPEKK+G ERLK LG  TFAGT NP DVEAWL LIEK FRV R LEDRKVELAAFLLQN  +D                
Subjt:  EDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC---------------

Query:  -----------------------EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNE
                               EF+RLTQG+MTVAEYEKKYTELSKYATRVI DE +R                 +CADWNDFSKLVEVALR+EKSLNE
Subjt:  -----------------------EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNE

Query:  RKREREASKNVRTFSSSMHHN
        RKREREASKN+RTFSSSMH N
Subjt:  RKREREASKNVRTFSSSMHHN

A0A5D3CTK6 CCHC-type domain-containing protein1.7e-5460.75Show/hide
Query:  AQRLVSGNG-SAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC----------------------
        A+    G+G SAQSDP+KK+GIERLK LG  TFAGT NP DVEAWL LIEK FRV RC EDRKVELAAFLLQNG +D                       
Subjt:  AQRLVSGNG-SAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDC----------------------

Query:  ----------------EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREA
                        EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDE +R                 +CADWNDFSKLVE ALR+ KSLNERKRERE 
Subjt:  ----------------EFLRLTQGSMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREA

Query:  SKNVRTFSSSMHHN
        SKNVRTFSSSMH N
Subjt:  SKNVRTFSSSMHHN

A0A5D3DES5 DNA/RNA polymerases superfamily protein3.2e-5867.53Show/hide
Query:  EDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQN--GVKDCEFLRLTQG-----
        E+QLLDRLAQRL+SG  SAQSDPEKK+GIERLK LG  TF GT NPAD EAWL LIEK FRV RC EDRKVELA+FLLQN  G K  ++ R+ +      
Subjt:  EDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQN--GVKDCEFLRLTQG-----

Query:  ----SMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREASKNVRTFSSSMHHN
            SMTV +YEKKYTELSKYATRVIEDE +R                 +CADWNDFSKLVE ALR+EKSLNERKRERE SKNVRTFSSSMH N
Subjt:  ----SMTVAEYEKKYTELSKYATRVIEDEAKR-----------------SCADWNDFSKLVEVALRIEKSLNERKREREASKNVRTFSSSMHHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATCTAGTCGTCCTTATGTTGAGGGAAGATCAATTGCTTGATAGATTGGCTCAAAGATTGGTGTCAGGGAATGGATCGGCACAATCAGACCCAGAAAAGAAGTT
TGGGATTGAGCGATTGAAATTCTTGGGTGTTGCCACTTTCGCGGGGACAAAAAATCCCGCCGATGTTGAAGCATGGCTTAATTTGATTGAAAAACGCTTCAGAGTAATGA
GATGTCTGGAGGATAGGAAGGTGGAACTTGCTGCCTTTTTACTCCAAAATGGTGTTAAAGATTGTGAGTTCTTAAGGCTCACTCAAGGGTCAATGACTGTTGCAGAATAT
GAGAAGAAGTATACAGAATTATCTAAGTATGCCACTAGGGTGATCGAGGATGAGGCGAAAAGATCTTGTGCAGACTGGAATGATTTCTCTAAATTAGTGGAGGTAGCACT
AAGGATAGAGAAAAGTTTAAATGAAAGGAAGCGTGAAAGAGAAGCTTCCAAGAATGTACGTACATTCAGTTCGTCGATGCATCATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATCTAGTCGTCCTTATGTTGAGGGAAGATCAATTGCTTGATAGATTGGCTCAAAGATTGGTGTCAGGGAATGGATCGGCACAATCAGACCCAGAAAAGAAGTT
TGGGATTGAGCGATTGAAATTCTTGGGTGTTGCCACTTTCGCGGGGACAAAAAATCCCGCCGATGTTGAAGCATGGCTTAATTTGATTGAAAAACGCTTCAGAGTAATGA
GATGTCTGGAGGATAGGAAGGTGGAACTTGCTGCCTTTTTACTCCAAAATGGTGTTAAAGATTGTGAGTTCTTAAGGCTCACTCAAGGGTCAATGACTGTTGCAGAATAT
GAGAAGAAGTATACAGAATTATCTAAGTATGCCACTAGGGTGATCGAGGATGAGGCGAAAAGATCTTGTGCAGACTGGAATGATTTCTCTAAATTAGTGGAGGTAGCACT
AAGGATAGAGAAAAGTTTAAATGAAAGGAAGCGTGAAAGAGAAGCTTCCAAGAATGTACGTACATTCAGTTCGTCGATGCATCATAATTGA
Protein sequenceShow/hide protein sequence
MSNLVVLMLREDQLLDRLAQRLVSGNGSAQSDPEKKFGIERLKFLGVATFAGTKNPADVEAWLNLIEKRFRVMRCLEDRKVELAAFLLQNGVKDCEFLRLTQGSMTVAEY
EKKYTELSKYATRVIEDEAKRSCADWNDFSKLVEVALRIEKSLNERKREREASKNVRTFSSSMHHN